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Volumn 48, Issue 2, 2016, Pages 201-205

Hybridization of powdery mildew strains gives rise to pathogens on novel agricultural crop species

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTATION; ARTICLE; BLUMERIA GRAMINIS; BLUMERIA GRAMINIS SP. SECALIS; BLUMERIA GRAMINIS SP. TRITICALE; BLUMERIA GRAMINIS SP. TRITICI; CROP; FUNGAL GENOME; FUNGUS ISOLATION; GENE SEQUENCE; HOST; HYBRIDIZATION; NONHUMAN; POWDERY MILDEW; PRIORITY JOURNAL; TRITICALE; ASCOMYCETES; CLASSIFICATION; FUNGAL GENE; GENETICS; MICROBIOLOGY; SPECIES DIFFERENCE;

EID: 84956468285     PISSN: 10614036     EISSN: 15461718     Source Type: Journal    
DOI: 10.1038/ng.3485     Document Type: Article
Times cited : (137)

References (52)
  • 1
    • 79952074104 scopus 로고    scopus 로고
    • Impact de l'oïdium sur la culture du triticale
    • Mascher, F., Reichmann, P., & Schori, A. Impact de l'oïdium sur la culture du triticale. Revue Suisse Agric. 38, 193-196 (2005
    • (2005) Revue Suisse Agric , vol.38 , pp. 193-196
    • Mascher, F.1    Reichmann, P.2    Schori, A.3
  • 2
    • 79952081000 scopus 로고    scopus 로고
    • Evidence of host-range expansion from new powdery mildew (Blumeria graminis) infections of triticale (Triticosecale) in France
    • Walker, A.S., Bouguennec, A., Confais, J., Morgant, G., & Leroux, P. Evidence of host-range expansion from new powdery mildew (Blumeria graminis) infections of triticale (Triticosecale) in France. Plant Pathol. 60, 207-220 (2011
    • (2011) Plant Pathol , vol.60 , pp. 207-220
    • Walker, A.S.1    Bouguennec, A.2    Confais, J.3    Morgant, G.4    Leroux, P.5
  • 3
    • 26244450444 scopus 로고    scopus 로고
    • The fortune of a botanical curiosity-Triticale: Past, present and future
    • Oettler, G. The fortune of a botanical curiosity-Triticale: past, present and future. J. Agric. Sci. 143, 329-346 (2005
    • (2005) J. Agric. Sci , vol.143 , pp. 329-346
    • Oettler, G.1
  • 4
    • 84883463113 scopus 로고    scopus 로고
    • The wheat powdery mildew genome shows the unique evolution of an obligate biotroph
    • Wicker T., et al. The wheat powdery mildew genome shows the unique evolution of an obligate biotroph. Nat. Genet. 45, 1092-1096 (2013
    • (2013) Nat. Genet , vol.45 , pp. 1092-1096
    • Wicker, T.1
  • 5
    • 84979684386 scopus 로고
    • The physiological specialization of wheat powdery mildew in Israel and the search for mildew resistance in wild wheat Triticum dicoccoides
    • Eshed, N., Dinoor, A., & Litwin, Y. The physiological specialization of wheat powdery mildew in Israel and the search for mildew resistance in wild wheat Triticum dicoccoides. Phytoparasitica 22, 49-90 (1994
    • (1994) Phytoparasitica , vol.22 , pp. 49-90
    • Eshed, N.1    Dinoor, A.2    Litwin, Y.3
  • 6
    • 84861693464 scopus 로고    scopus 로고
    • Phylogeography and virulence structure of the powdery mildew population on its new' host triticale
    • Troch, V., Audenaert, K., Bekaert, B., Höfte, M., & Haesaert, G. Phylogeography and virulence structure of the powdery mildew population on its new' host triticale. BMC Evol. Biol. 12, 76 (2012
    • (2012) BMC Evol. Biol , vol.12 , pp. 76
    • Troch, V.1    Audenaert, K.2    Bekaert, B.3    Höfte, M.4    Haesaert, G.5
  • 7
    • 84873889653 scopus 로고    scopus 로고
    • Evaluation of resistance to powdery mildew in triticale seedlings and adult plants
    • Troch V., et al. Evaluation of resistance to powdery mildew in triticale seedlings and adult plants. Plant Dis. 97, 410-417 (2013
    • (2013) Plant Dis , vol.97 , pp. 410-417
    • Troch, V.1
  • 8
    • 84863593823 scopus 로고    scopus 로고
    • Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species
    • Stukenbrock, E.H., Christiansen, F.B., Hansen, T.T., Dutheil, J.Y., & Schierup, M.H. Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species. Proc. Natl. Acad. Sci. USA 109, 10954-10959 (2012
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 10954-10959
    • Stukenbrock, E.H.1    Christiansen, F.B.2    Hansen, T.T.3    Dutheil, J.Y.4    Schierup, M.H.5
  • 9
    • 84897556789 scopus 로고    scopus 로고
    • Sequencing of chloroplast genomes from wheat barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe
    • Middleton, C.P., et al. Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe. PLoS One 9, e85761 (2014
    • (2014) PLoS One , vol.9 , pp. e85761
    • Middleton, C.P.1
  • 10
    • 48049119706 scopus 로고    scopus 로고
    • Oomycete RXLR effectors: Delivery functional redundancy and durable disease resistance
    • Birch, P.R.J., et al. Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance. Curr. Opin. Plant Biol. 11, 373-379 (2008
    • (2008) Curr. Opin. Plant Biol , vol.11 , pp. 373-379
    • Birch, P.R.J.1
  • 13
    • 0033675677 scopus 로고    scopus 로고
    • Multiple gene genealogies reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans
    • Xu, J., Vilgalys, R., & Mitchell, T.G. Multiple gene genealogies reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans. Mol. Ecol. 9, 1471-1481 (2000
    • (2000) Mol. Ecol , vol.9 , pp. 1471-1481
    • Xu, J.1    Vilgalys, R.2    Mitchell, T.G.3
  • 14
    • 0036984358 scopus 로고    scopus 로고
    • Radiation and reticulation: Extensive introgressive hybridization in the carabid beetles Ohomopterus inferred from mitochondrial gene genealogy
    • Sota, T. Radiation and reticulation: extensive introgressive hybridization in the carabid beetles Ohomopterus inferred from mitochondrial gene genealogy. Popul. Ecol. 44, 145-156 (2002
    • (2002) Popul. Ecol , vol.44 , pp. 145-156
    • Sota, T.1
  • 15
    • 13244292527 scopus 로고    scopus 로고
    • Gene tree distributions under the coalescent process
    • Degnan, J.H., & Salter, L.A. Gene tree distributions under the coalescent process. Evolution 59, 24-37 (2005
    • (2005) Evolution , vol.59 , pp. 24-37
    • Degnan, J.H.1    Salter, L.A.2
  • 16
    • 51349098340 scopus 로고    scopus 로고
    • PhyloNet: A software package for analyzing and reconstructing reticulate evolutionary relationships
    • Than, C., Ruths, D., & Nakhleh, L. PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships. BMC Bioinformatics 9, 322 (2008
    • (2008) BMC Bioinformatics , vol.9 , pp. 322
    • Than, C.1    Ruths, D.2    Nakhleh, L.3
  • 17
    • 79951575208 scopus 로고    scopus 로고
    • Coalescent histories on phylogenetic networks and detection of hybridization despite incomplete lineage sorting
    • Yu, Y., Than, C., Degnan, J.H., & Nakhleh, L. Coalescent histories on phylogenetic networks and detection of hybridization despite incomplete lineage sorting. Syst. Biol. 60, 138-149 (2011
    • (2011) Syst. Biol , vol.60 , pp. 138-149
    • Yu, Y.1    Than, C.2    Degnan, J.H.3    Nakhleh, L.4
  • 18
    • 84860577768 scopus 로고    scopus 로고
    • The probability of a gene tree topology within a phylogenetic network with applications to hybridization detection
    • Yu, Y., Degnan, J.H., & Nakhleh, L. The probability of a gene tree topology within a phylogenetic network with applications to hybridization detection. PLoS Genet. 8, e1002660 (2012
    • (2012) PLoS Genet , vol.8 , pp. e1002660
    • Yu, Y.1    Degnan, J.H.2    Nakhleh, L.3
  • 19
    • 0033545867 scopus 로고    scopus 로고
    • Origin of a new Phytophthora pathogen through interspecific hybridization
    • Brasier, C.M., Cooke, D.E.L., & Duncan, J.M. Origin of a new Phytophthora pathogen through interspecific hybridization. Proc. Natl. Acad. Sci. USA 96, 5878-5883 (1999
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 5878-5883
    • Brasier, C.M.1    Cooke, D.E.L.2    Duncan, J.M.3
  • 20
    • 0034636485 scopus 로고    scopus 로고
    • The rise of the hybrid fungi
    • Brasier, C. The rise of the hybrid fungi. Nature 405, 134-135 (2000
    • (2000) Nature , vol.405 , pp. 134-135
    • Brasier, C.1
  • 21
    • 0033933388 scopus 로고    scopus 로고
    • Melampsora ' columbiana, a natural hybrid of M medusae and M occidentalis
    • Newcombe, G., Stirling, B., McDonald, S., & Bradshaw, H.D. Melampsora ' columbiana, a natural hybrid of M. medusae and M. occidentalis. Mycol. Res. 104, 261-274 (2000
    • (2000) Mycol. Res , vol.104 , pp. 261-274
    • Newcombe, G.1    Stirling, B.2    McDonald, S.3    Bradshaw, H.D.4
  • 22
    • 80052841206 scopus 로고    scopus 로고
    • The plant pathogen Phytophthora andina emerged via hybridization of an unknown Phytophthora species and the Irish potato famine pathogen P infestans
    • Goss, E.M., et al. The plant pathogen Phytophthora andina emerged via hybridization of an unknown Phytophthora species and the Irish potato famine pathogen, P. infestans. PLoS One 6, e24543 (2011
    • (2011) PLoS One , vol.6 , pp. e24543
    • Goss, E.M.1
  • 23
    • 74249088824 scopus 로고    scopus 로고
    • Rapid emergence of hybrids between the two subspecies of Ophiostoma novo-ulmi with a high level of pathogenic fitness
    • Brasier, C.M., & Kirk, S.A. Rapid emergence of hybrids between the two subspecies of Ophiostoma novo-ulmi with a high level of pathogenic fitness. Plant Pathol. 59, 186-199 (2010
    • (2010) Plant Pathol , vol.59 , pp. 186-199
    • Brasier, C.M.1    Kirk, S.A.2
  • 24
    • 81755187011 scopus 로고    scopus 로고
    • Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage
    • Farrer R.A., et al. Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage. Proc. Natl. Acad. Sci. USA 108, 18732-18736 (2011
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 18732-18736
    • Farrer, R.A.1
  • 25
    • 84869028379 scopus 로고    scopus 로고
    • Genome evolution due to allopolyploidization in wheat
    • Feldman, M., & Levy, A.A. Genome evolution due to allopolyploidization in wheat. Genetics 192, 763-774 (2012
    • (2012) Genetics , vol.192 , pp. 763-774
    • Feldman, M.1    Levy, A.A.2
  • 26
    • 8644290218 scopus 로고    scopus 로고
    • Infection of triticale cultivars by Puccinia striiformis: First report on disease severity and yield loss
    • Tian, S., Weinert, J., & Wolf, G.A. Infection of triticale cultivars by Puccinia striiformis: first report on disease severity and yield loss. J. Plant Dis. Protection 111, 461-464 (2004
    • (2004) J. Plant Dis. Protection , vol.111 , pp. 461-464
    • Tian, S.1    Weinert, J.2    Wolf, G.A.3
  • 27
    • 84970544608 scopus 로고
    • The role of wild and cultivated grasses in the hybridization of formae speciales of Puccinia graminis
    • Luig, N.H., & Watson, I.A. The role of wild and cultivated grasses in the hybridization of formae speciales of Puccinia graminis. Aust. J. Biol. Sci. 25, 335-342 (1972
    • (1972) Aust. J. Biol. Sci , vol.25 , pp. 335-342
    • Luig, N.H.1    Watson, I.A.2
  • 28
    • 84946735511 scopus 로고    scopus 로고
    • Multiple avirulence loci and allele-specific effector recognition control the Pm3 race-specific resistance of wheat to powdery mildew
    • Bourras S., et al. Multiple avirulence loci and allele-specific effector recognition control the Pm3 race-specific resistance of wheat to powdery mildew. Plant Cell 27, 2991-3012 (2015
    • (2015) Plant Cell , vol.27 , pp. 2991-3012
    • Bourras, S.1
  • 29
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead, B., & Salzberg, S.L. Fast gapped-read alignment with Bowtie 2. Nat. Methods 9, 357-359 (2012
    • (2012) Nat. Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 30
    • 68549104404 scopus 로고    scopus 로고
    • The sequence alignment/map format and samtools
    • Li H., et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25, 2078-2079 (2009
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1
  • 31
    • 84866467273 scopus 로고    scopus 로고
    • GAPIT: Genome association and prediction integrated tool
    • Lipka A.E., et al. GAPIT: genome association and prediction integrated tool. Bioinformatics 28, 2397-2399 (2012
    • (2012) Bioinformatics , vol.28 , pp. 2397-2399
    • Lipka, A.E.1
  • 33
    • 77951820899 scopus 로고    scopus 로고
    • Fast and SNP-Tolerant detection of complex variants and splicing in short reads
    • Wu, T.D., & Nacu, S. Fast and SNP-Tolerant detection of complex variants and splicing in short reads. Bioinformatics 26, 873-881 (2010
    • (2010) Bioinformatics , vol.26 , pp. 873-881
    • Wu, T.D.1    Nacu, S.2
  • 34
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • Altschul S.F., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402 (1997
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1
  • 35
    • 84878969764 scopus 로고    scopus 로고
    • Mosaic genome structure of the barley powdery mildew pathogen and conservation of transcriptional programs in divergent hosts
    • Hacquard S., et al. Mosaic genome structure of the barley powdery mildew pathogen and conservation of transcriptional programs in divergent hosts. Proc. Natl. Acad. Sci. USA 110, E2219-E2228 (2013
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. E2219-E2228
    • Hacquard, S.1
  • 36
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32, 1792-1797 (2004
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 37
    • 84899553363 scopus 로고    scopus 로고
    • RAxML version 8: A tool for phylogenetic analysis and post-Analysis of large phylogenies
    • Stamatakis, A. RAxML version 8: a tool for phylogenetic analysis and post-Analysis of large phylogenies. Bioinformatics 30, 1312-1313 (2014
    • (2014) Bioinformatics , vol.30 , pp. 1312-1313
    • Stamatakis, A.1
  • 38
    • 0002671410 scopus 로고
    • Some probabilistic and statistical problems in the analysis of DNA sequences
    • Tavaré, S. Some probabilistic and statistical problems in the analysis of DNA sequences. Lect. Math Life Sci. (American Mathematical Society) 17, 57-86 (1986
    • (1986) Lect. Math Life Sci. (American Mathematical Society) , vol.17 , pp. 57-86
    • Tavaré, S.1
  • 39
    • 0027132974 scopus 로고
    • Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites
    • Yang, Z. Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites. Mol. Biol. Evol. 10, 1396-1401 (1993
    • (1993) Mol. Biol. Evol , vol.10 , pp. 1396-1401
    • Yang, Z.1
  • 40
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
    • Yang, Z. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol. 39, 306-314 (1994
    • (1994) J. Mol. Evol , vol.39 , pp. 306-314
    • Yang, Z.1
  • 41
    • 77954209892 scopus 로고    scopus 로고
    • The Newick utilities: High-Throughput phylogenetic tree processing in the UNIX shell
    • Junier, T., & Zdobnov, E.M. The Newick utilities: high-Throughput phylogenetic tree processing in the UNIX shell. Bioinformatics 26, 1669-1670 (2010
    • (2010) Bioinformatics , vol.26 , pp. 1669-1670
    • Junier, T.1    Zdobnov, E.M.2
  • 42
    • 77954272855 scopus 로고    scopus 로고
    • TranslatorX: Multiple alignment of nucleotide sequences guided by amino acid translations
    • Abascal, F., Zardoya, R., & Telford, M.J. TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations. Nucleic Acids Res. 38, W7-W13 (2010
    • (2010) Nucleic Acids Res , vol.38 , pp. W7-W13
    • Abascal, F.1    Zardoya, R.2    Telford, M.J.3
  • 43
    • 84860109324 scopus 로고    scopus 로고
    • MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space
    • Ronquist F., et al. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61, 539-542 (2012
    • (2012) Syst. Biol , vol.61 , pp. 539-542
    • Ronquist, F.1
  • 44
    • 2442671519 scopus 로고    scopus 로고
    • Bayesian phylogenetic model selection using reversible jump Markov chain Monte Carlo
    • Huelsenbeck, J.P., Larget, B., & Alfaro, M.E. Bayesian phylogenetic model selection using reversible jump Markov chain Monte Carlo. Mol. Biol. Evol. 21, 1123-1133 (2004
    • (2004) Mol. Biol. Evol , vol.21 , pp. 1123-1133
    • Huelsenbeck, J.P.1    Larget, B.2    Alfaro, M.E.3
  • 45
    • 0038357691 scopus 로고    scopus 로고
    • Genetic and forma specialis diversity in Blumeria graminis of cereals and its implications for host-pathogen co-evolution
    • Wyand, R.A., & Brown, J.K. Genetic and forma specialis diversity in Blumeria graminis of cereals and its implications for host-pathogen co-evolution. Mol. Plant Pathol. 4, 187-198 (2003
    • (2003) Mol. Plant Pathol , vol.4 , pp. 187-198
    • Wyand, R.A.1    Brown, J.K.2
  • 46
    • 37549001784 scopus 로고    scopus 로고
    • A general comparison of relaxed molecular clock models
    • Lepage, T., Bryant, D., Philippe, H., & Lartillot, N A general comparison of relaxed molecular clock models. Mol. Biol. Evol. 24, 2669-2680 (2007
    • (2007) Mol. Biol. Evol , vol.24 , pp. 2669-2680
    • Lepage, T.1    Bryant, D.2    Philippe, H.3    Lartillot, N.4
  • 47
    • 84855715148 scopus 로고    scopus 로고
    • A major invasion of transposable elements accounts for the large size of the Blumeria graminis f sp
    • Parlange F., et al A major invasion of transposable elements accounts for the large size of the Blumeria graminis f.sp. tritici genome. Funct. Integr. Genomics 11, 671-677 (2011
    • (2011) Tritici Genome. Funct. Integr. Genomics , vol.11 , pp. 671-677
    • Parlange, F.1
  • 48
    • 84871809302 scopus 로고    scopus 로고
    • STAR: Ultrafast universal RNA-seq aligner
    • Dobin A., et al. STAR: ultrafast universal RNA-seq aligner. Bioinformatics 29, 15-21 (2013
    • (2013) Bioinformatics , vol.29 , pp. 15-21
    • Dobin, A.1
  • 49
    • 84897397058 scopus 로고    scopus 로고
    • FeatureCounts: An efficient general purpose program for assigning sequence reads to genomic features
    • Liao, Y., Smyth, G.K., & Shi, W. featureCounts: an efficient general purpose program for assigning sequence reads to genomic features. Bioinformatics 30, 923-930 2014
    • (2014) Bioinformatics , vol.30 , pp. 923-930
    • Liao, Y.1    Smyth, G.K.2    Shi, W.3
  • 50
    • 75249087100 scopus 로고    scopus 로고
    • EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
    • Robinson, M.D., McCarthy, D.J., & Smyth, G.K. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26, 139-140 (2010
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 51
    • 0016355478 scopus 로고
    • A new look on the statistical model dentification
    • Akaike, H A new look on the statistical model dentification. IEE Transaction on Automatic Control 19, 716-723 (1974
    • (1974) IEE Transaction on Automatic Control , vol.19 , pp. 716-723
    • Akaike, H.1
  • 52
    • 0000120766 scopus 로고
    • Estimating the dimension of a model
    • Schwarz, G.E. Estimating the dimension of a model. Ann. Stat. 6, 461-464 (1978
    • (1978) Ann. Stat , vol.6 , pp. 461-464
    • Schwarz, G.E.1


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