-
2
-
-
84857952188
-
The clock gene circuit in arabidopsis includes a repressilator with additional feedback loops
-
Pokhilko A, Fernandez AP, Edwards KD, Southern MM, Halliday KJ, Millar AJ. The clock gene circuit in Arabidopsis includes a repressilator with additional feedback loops. Mol Syst Biol. 2012; 8.
-
(2012)
Mol Syst Biol
, vol.8
-
-
Pokhilko, A.1
Fernandez, A.P.2
Edwards, K.D.3
Southern, M.M.4
Halliday, K.J.5
Millar, A.J.6
-
3
-
-
84859508042
-
Mapping the core of the arabidopsis circadian clock defines the network structure of the oscillator
-
PMID: 22403178
-
Huang W, Pérez-García P, Pokhilko A, Millar AJ, Antoshechkin I, Riechmann JL, et al. Mapping the Core of the Arabidopsis Circadian Clock Defines the Network Structure of the Oscillator. Science. 2012; 336(6077):75-9. doi: 10.1126/science.1219075 PMID: 22403178
-
(2012)
Science
, vol.336
, Issue.6077
, pp. 75-79
-
-
Huang, W.1
Pérez-García, P.2
Pokhilko, A.3
Millar, A.J.4
Antoshechkin, I.5
Riechmann, J.L.6
-
4
-
-
84879156583
-
Emerging design principles in the arabidopsis circadian clock
-
PMID: 23597453
-
Carré I, Veflingstad SR. Emerging design principles in the Arabidopsis circadian clock. Seminars in Cell & Developmental Biology. 2013; 24(5):393-8. doi: 10.1016/j.semcdb.2013.03.011 PMID: 23597453
-
(2013)
Seminars in Cell & Developmental Biology
, vol.24
, Issue.5
, pp. 393-398
-
-
Carré, I.1
Veflingstad, S.R.2
-
5
-
-
0033771646
-
Circadian waves of expression of the aprr1/toc1 family of pseudo-response regulators in arabidopsis thaliana: Insight into the plant circadian clock
-
PMID: 11100772
-
Matsushika A, Makino S, Kojima M, Mizuno T. Circadian waves of expression of the APRR1/TOC1 family of pseudo-response regulators in Arabidopsis thaliana: insight into the plant circadian clock. Plant and Cell Physiology. 2000; 41(9):1002-12. PMID: 11100772
-
(2000)
Plant and Cell Physiology
, vol.41
, Issue.9
, pp. 1002-1012
-
-
Matsushika, A.1
Makino, S.2
Kojima, M.3
Mizuno, T.4
-
6
-
-
77952919484
-
Pseudo-response regulators 9,7 and 5 are transcriptional repressors in the arabidopsis circadian clock
-
PMID: 20233950
-
Nakamichi N, Kiba T, Henriques R, Mizuno T, Chua NH, Sakakibara H. PSEUDO-RESPONSE REGULATORS 9,7 and 5 are transcriptional repressors in the Arabidopsis circadian clock. Plant Cell. 2010; 22:594-605. doi: 10.1105/tpc.109.072892 PMID: 20233950
-
(2010)
Plant Cell
, vol.22
, pp. 594-605
-
-
Nakamichi, N.1
Kiba, T.2
Henriques, R.3
Mizuno, T.4
Chua, N.H.5
Sakakibara, H.6
-
7
-
-
79955007772
-
Functional implication of the myb transcription factor rve8/lcl5 in the circadian control of histone acetylation
-
PMID 21205033
-
Farinas B, Mas P. Functional implication of the MYB transcription factor RVE8/LCL5 in the circadian control of histone acetylation. Plant Journal. 2011; 66(2):318-29. doi: 10.1111/j.1365-313X.2011. 04484.x PMID: 21205033
-
(2011)
Plant Journal
, vol.66
, Issue.2
, pp. 318-329
-
-
Farinas, B.1
Mas, P.2
-
8
-
-
79953730633
-
Reveille8 and pseudoreponse regulator5 form a negative feedback loop within the arabidopsis circadian clock
-
PMID: 21483796
-
Rawat R, Takahashi N, Hsu PY, Jones MA, Schwartz J, Salemi MR, et al. REVEILLE8 and PSEUDOREPONSE REGULATOR5 Form a Negative Feedback Loop within the Arabidopsis Circadian Clock. PLoS Genet. 2011; 7(3):e1001350. doi: 10.1371/journal.pgen.1001350 PMID: 21483796
-
(2011)
PLoS Genet
, vol.7
, Issue.3
, pp. e1001350
-
-
Rawat, R.1
Takahashi, N.2
Hsu, P.Y.3
Jones, M.A.4
Schwartz, J.5
Salemi, M.R.6
-
9
-
-
84879065464
-
Accurate timekeeping is controlled by a cycling activator in arabidopsis
-
Hsu PY, Devisetty UK, Harmer SL, Chory J. Accurate timekeeping is controlled by a cycling activator in Arabidopsis. eLife. 2013; 2
-
(2013)
ELife
, vol.2
-
-
Hsu, P.Y.1
Devisetty, U.K.2
Harmer, S.L.3
Chory, J.4
-
10
-
-
79953084035
-
Light-regulated wd1 and pseudo-response regulator9 form a positive feedback regulatory loop in the arabidopsis circadian clock
-
PMID: 21357491
-
Wang Y, Wu J-F, Nakamichi N, Sakakibara H, Nam H-G, Wu S-H. LIGHT-REGULATED WD1 and PSEUDO-RESPONSE REGULATOR9 Form a Positive Feedback Regulatory Loop in the Arabidopsis Circadian Clock. Plant Cell. 2011; 23(2):486-98. doi: 10.1105/tpc.110.081661 PMID: 21357491
-
(2011)
Plant Cell
, vol.23
, Issue.2
, pp. 486-498
-
-
Wang, Y.1
Wu, J.-F.2
Nakamichi, N.3
Sakakibara, H.4
Nam, H.-G.5
Wu, S.-H.6
-
11
-
-
84880391363
-
Lnk genes integrate light and clock signaling networks at the core of the arabidopsis oscillator
-
Rugnone ML, Faigón Soverna A, Sanchez SE, Schlaen RG, Hernando CE, Seymour DK, et al. LNK genes integrate light and clock signaling networks at the core of the Arabidopsis oscillator. Proceedings of the National Academy of Sciences. 2013; 110(29):12120-5.
-
(2013)
Proceedings of the National Academy of Sciences
, vol.110
, Issue.29
, pp. 12120-12125
-
-
Rugnone, M.L.1
Faigón Soverna, A.2
Sanchez, S.E.3
Schlaen, R.G.4
Hernando, C.E.5
Seymour, D.K.6
-
12
-
-
34548355182
-
A functional link between rhythmic changes in chromatin structure and the arabidopsis biological clock
-
PMID: 17616736
-
Perales M, Mas P. A Functional Link between Rhythmic Changes in Chromatin Structure and the Arabidopsis Biological Clock. Plant Cell. 2007; 19(7):2111-23. PMID: 17616736
-
(2007)
Plant Cell
, vol.19
, Issue.7
, pp. 2111-2123
-
-
Perales, M.1
Mas, P.2
-
13
-
-
58249105076
-
Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids
-
PMID: 19029881
-
Ni Z, Kim E-D, Ha M, Lackey E, Liu J, Zhang Y, et al. Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids. Nature. 2009; 457(7227):327-31. doi: 10.1038/nature07523 PMID: 19029881
-
(2009)
Nature
, vol.457
, Issue.7227
, pp. 327-331
-
-
Ni, Z.1
Kim, E.-D.2
Ha, M.3
Lackey, E.4
Liu, J.5
Zhang, Y.6
-
14
-
-
78649714225
-
The functional interplay between protein kinase ck2 and cca1 transcriptional activity is essential for clock temperature compensation in arabidopsis
-
PMID: 21079791
-
Portolés S, Más P. The Functional Interplay between Protein Kinase CK2 and CCA1 Transcriptional Activity Is Essential for Clock Temperature Compensation in Arabidopsis. PLoS Genet. 2010; 6(11): e1001201. doi: 10.1371/journal.pgen.1001201 PMID: 21079791
-
(2010)
PLoS Genet
, vol.6
, Issue.11
, pp. e1001201
-
-
Portolés, S.1
Más, P.2
-
15
-
-
85027917365
-
Coordinated transcriptional regulation underlying the circadian clock in arabidopsis
-
PMID: 21499259
-
Li G, Siddiqui H, Teng Y, Lin R, Wan X-y, Li J, et al. Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis. Nat Cell Biol. 2011; 13(5):616-22. doi: 10.1038/ncb2219 PMID: 21499259
-
(2011)
Nat Cell Biol
, vol.13
, Issue.5
, pp. 616-622
-
-
Li, G.1
Siddiqui, H.2
Teng, Y.3
Lin, R.4
Wan, X.-Y.5
Li, J.6
-
16
-
-
84863012419
-
Cca1 and elf3 interact in the control of hypocotyl length and flowering time in arabidopsis
-
PMID 22190341
-
Lu SX, Webb CJ, Knowles SM, Kim SHJ, Wang Z, Tobin EM. CCA1 and ELF3 Interact in the Control of Hypocotyl Length and Flowering Time in Arabidopsis. Plant Physiology. 2012; 158(2):1079-88. doi: 10. 1104/pp.111.189670 PMID: 22190341
-
(2012)
Plant Physiology
, vol.158
, Issue.2
, pp. 1079-1088
-
-
Lu, S.X.1
Webb, C.J.2
Knowles, S.M.3
Kim, S.H.J.4
Wang, Z.5
Tobin, E.M.6
-
17
-
-
22544468054
-
Lux arrhythmo encodes a myb domain protein essential for circadian rhythms
-
Epub 2005/07/12. PMID: 16006522
-
Hazen SP, Schultz TF, Pruneda-Paz JL, Borevitz JO, Ecker JR, Kay SA. LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms. Proc Natl Acad Sci U S A. 2005; 102(29):1038792. Epub 2005/07/12. PMID: 16006522
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, Issue.29
, pp. 1038792
-
-
Hazen, S.P.1
Schultz, T.F.2
Pruneda-Paz, J.L.3
Borevitz, J.O.4
Ecker, J.R.5
Kay, S.A.6
-
18
-
-
66649133364
-
Posttranslational regulation of circadian clock associated1 in the circadian oscillator of arabidopsis
-
PMID: 19339503
-
Yakir E, Hilman D, Kron I, Hassidim M, Melamed-Book N, Green RM. Posttranslational Regulation of CIRCADIAN CLOCK ASSOCIATED1 in the Circadian Oscillator of Arabidopsis. Plant Physiol. 2009; 150:844-57. doi: 10.1104/pp.109.137414 PMID: 19339503
-
(2009)
Plant Physiol
, vol.150
, pp. 844-857
-
-
Yakir, E.1
Hilman, D.2
Kron, I.3
Hassidim, M.4
Melamed-Book, N.5
Green, R.M.6
-
19
-
-
0036100299
-
Lhy and cca1 are partially redundant genes required to maintain circadian rhythms in arabidopsis
-
PMID: 12015970
-
Mizoguchi T, Wheatley K, Hanzawa Y, Wright L, Mizoguchi M, Song HR, et al. LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis. Developmental Cell. 2002; 2(5):629-41. PMID: 12015970
-
(2002)
Developmental Cell
, vol.2
, Issue.5
, pp. 629-641
-
-
Mizoguchi, T.1
Wheatley, K.2
Hanzawa, Y.3
Wright, L.4
Mizoguchi, M.5
Song, H.R.6
-
20
-
-
0037197943
-
Critical role for cca1 and lhy in maintaining circadian rhythmicity in arabidopsis
-
PMID: 12007421
-
Alabadi D, Yanovsky MJ, Mas P, Harmer SL, Kay SA. Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis. Current Biology. 2002; 12(9):757-61. PMID: 12007421
-
(2002)
Current Biology
, vol.12
, Issue.9
, pp. 757-761
-
-
Alabadi, D.1
Yanovsky, M.J.2
Mas, P.3
Harmer, S.L.4
Kay, S.A.5
-
21
-
-
70849110155
-
Evolutionarily conserved regulatory motifs in the promoter of the arabidopsis clock gene late elongated hypocotyl
-
PMID: 19789276
-
Spensley M, Kim J-Y, Picot E, Reid J, Ott S, Helliwell C, et al. Evolutionarily Conserved Regulatory Motifs in the Promoter of the Arabidopsis Clock Gene LATE ELONGATED HYPOCOTYL. Plant Cell. 2009; 21:2606-23. doi: 10.1105/tpc.109.069898 PMID: 19789276
-
(2009)
Plant Cell
, vol.21
, pp. 2606-2623
-
-
Spensley, M.1
Kim, J.-Y.2
Picot, E.3
Reid, J.4
Ott, S.5
Helliwell, C.6
-
22
-
-
11844289579
-
Overlapping and distinct roles of prr7 and prr9 in the arabidopsis clock
-
PMID: 15649364
-
Farré EM, Harmer SL, Harmon FG, Yanovsky MJ, Kay SA. Overlapping and distinct roles of PRR7 and PRR9 in the Arabidopsis clock. Current Biology. 2005; 15:47-54. PMID: 15649364
-
(2005)
Current Biology
, vol.15
, pp. 47-54
-
-
Farré, E.M.1
Harmer, S.L.2
Harmon, F.G.3
Yanovsky, M.J.4
Kay, S.A.5
-
23
-
-
0032568796
-
Constitutive expression of the circadian clock associated (cca1) gene disrupts circadian rhythms and suppresses its own expression
-
PMID: 9657153
-
Wang Z-Y, Tobin EM. Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED (CCA1) gene disrupts circadian rhythms and suppresses its own expression. Cell. 1998; 93:1207-17. PMID: 9657153
-
(1998)
Cell
, vol.93
, pp. 1207-1217
-
-
Wang, Z.-Y.1
Tobin, E.M.2
-
24
-
-
0006180620
-
The late elongated hypocotyl mutation of arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering
-
PMID: 9657154
-
Schaffer R, Ramsay N, Samach A, Corden S, Putterill J, Carré IA, et al. The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering. Cell. 1998; 93:1219-29. PMID: 9657154
-
(1998)
Cell
, vol.93
, pp. 1219-1229
-
-
Schaffer, R.1
Ramsay, N.2
Samach, A.3
Corden, S.4
Putterill, J.5
Carré, I.A.6
-
25
-
-
84905455464
-
Rethinking transcriptional activation in the arabidopsis circadian clock
-
PMID: 25033214
-
Fogelmark K, Troein C. Rethinking Transcriptional Activation in the Arabidopsis Circadian Clock. PLoS Comput Biol. 2014; 10(7):e1003705. doi: 10.1371/journal.pcbi.1003705 PMID: 25033214
-
(2014)
PLoS Comput Biol
, vol.10
, Issue.7
, pp. e1003705
-
-
Fogelmark, K.1
Troein, C.2
-
26
-
-
33846050368
-
Experimental validation of a predicted feedback loop in the multi-oscillator clock of arabidopsis thaliana
-
PMID: 17102804
-
Locke J, Kozma-Bognár L, Gould P, B F, Kevei E, Nagy F, et al. Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana. Molecular Systems Biology. 2006; 2:59. PMID: 17102804
-
(2006)
Molecular Systems Biology
, vol.2
, pp. 59
-
-
Locke, J.1
Kozma-Bognár, L.2
Gould, P.B.F.3
Kevei, E.4
Nagy, F.5
-
27
-
-
20444398523
-
Pseudo-response regulators prr9, prr7 and prr5, together play essential roles close to the circadian clock of arabidopsis thaliana
-
PMID: 15767265
-
Nakamichi N, Kita M, Ito S, Yamashino T, Mizuno T. PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, Together Play Essential Roles Close to the Circadian Clock of Arabidopsis thaliana. Plant and Cell Physiology. 2005; 46(5):686-98. PMID: 15767265
-
(2005)
Plant and Cell Physiology
, vol.46
, Issue.5
, pp. 686-698
-
-
Nakamichi, N.1
Kita, M.2
Ito, S.3
Yamashino, T.4
Mizuno, T.5
-
28
-
-
20444382245
-
Pseudo-response regulator 7 and 9 are partially redundant genes esential for the temperature responsiveness of the arabidopsis circadian clock
-
Salome PA, McClung CR. PSEUDO-RESPONSE REGULATOR 7 and 9 are partially redundant genes esential for the temperature responsiveness of the Arabidopsis circadian clock. Plant Cell. 2005; 17 (791-803).
-
(2005)
Plant Cell
, vol.17
, pp. 791-803
-
-
Salome, P.A.1
McClung, C.R.2
-
29
-
-
55849139827
-
Testing time: Can ethanol-induced pulses of proposed oscillator components phase shift rhythms in arabidopsis
-
PMID: 19060255
-
Knowles SM, Lu SX, Tobin EM. Testing Time: Can Ethanol-Induced Pulses of Proposed Oscillator Components Phase Shift Rhythms in Arabidopsis J Biol Rhythms. 2008; 23:463-71. doi: 10.1177/0748730408326749 PMID: 19060255
-
(2008)
J Biol Rhythms
, vol.23
, pp. 463-471
-
-
Knowles, S.M.1
Lu, S.X.2
Tobin, E.M.3
-
30
-
-
0037072666
-
Dependence on heterochromatic histone h3 methylation patterns on the arabidopsis gene ddm1
-
PMID: 12077425
-
Gendrel A-V, Lippman Z, Yordan C, Colot V, Martienssem RA. Dependence on heterochromatic Histone H3 methylation patterns on the Arabidopsis gene DDM1. Science. 2002; 297:1871-3. PMID: 12077425
-
(2002)
Science
, vol.297
, pp. 1871-1873
-
-
Gendrel, A.-V.1
Lippman, Z.2
Yordan, C.3
Colot, V.4
Martienssem, R.A.5
-
31
-
-
0037450767
-
Light-regulated translation mediates gated induction of the arabidopsis clock protein lhy
-
PMID: 12574129
-
Kim JY, Song HR, Taylor BL, Carre IA. Light-regulated translation mediates gated induction of the Arabidopsis clock protein LHY. The Embo Journal. 2003; 22(4):935-44. PMID: 12574129
-
(2003)
The Embo Journal
, vol.22
, Issue.4
, pp. 935-944
-
-
Kim, J.Y.1
Song, H.R.2
Taylor, B.L.3
Carre, I.A.4
-
32
-
-
33847661809
-
Protocol for the fast chromatin immunoprecipitation (chip) method
-
PMID: 17406230
-
Nelson JD, Denisenko O, Bomsztyk K. Protocol for the fast chromatin immunoprecipitation (ChIP) method. Nat Protocols. 2006; 1(1):179-85. PMID: 17406230
-
(2006)
Nat Protocols
, vol.1
, Issue.1
, pp. 179-185
-
-
Nelson, J.D.1
Denisenko, O.2
Bomsztyk, K.3
-
33
-
-
40449100030
-
Direct multiplexed measurement of gene expression with color-coded probe pairs
-
Geiss GK, Bumgarner RE, Birditt B, Dahl T, Dowidar N, Dunaway DL, et al. Direct multiplexed measurement of gene expression with color-coded probe pairs. Nat Biotech. 2008; 26(3):317-25.
-
(2008)
Nat Biotech
, vol.26
, Issue.3
, pp. 317-325
-
-
Geiss, G.K.1
Bumgarner, R.E.2
Birditt, B.3
Dahl, T.4
Dowidar, N.5
Dunaway, D.L.6
|