-
1
-
-
84879153397
-
Trends in Klebsiella pneumoniae carbapenemase-positive K. Pneumoniae in US hospitals: Report from the 2007-2009 SENTRY Antimicrobial Surveillance Program
-
PMID: 23659829
-
Kaiser RM, Castanheira M, Jones RN, Tenover F, Lynfield R (2013) Trends in Klebsiella pneumoniae carbapenemase-positive K. pneumoniae in US hospitals: report from the 2007-2009 SENTRY Antimicrobial Surveillance Program. Diagn Microbiol Infect Dis 76: 356-360. doi: 10.1016/j.diagmicrobio. 2013.03.032 PMID: 23659829
-
(2013)
Diagn Microbiol Infect Dis
, vol.76
, pp. 356-360
-
-
Kaiser, R.M.1
Castanheira, M.2
Jones, R.N.3
Tenover, F.4
Lynfield, R.5
-
2
-
-
62749195559
-
The real threat of Klebsiella pneumoniae carbapenemase-producing bacteria
-
Nordmann P, Cuzon G, Naas T (2009) The real threat of Klebsiella pneumoniae carbapenemase-producing bacteria. Lancet Infect Dis 9: 228-236. doi: 10.1016/S1473-3099(09)70054-4 PMID: 19324295
-
(2009)
Lancet Infect Dis
, vol.9
, pp. 228-236
-
-
Nordmann, P.1
Cuzon, G.2
Naas, T.3
-
3
-
-
73849084148
-
Diversity, epidemiology, and genetics of class D beta-lactamases
-
PMID: 19721065
-
Poirel L, Naas T, Nordmann P (2010) Diversity, epidemiology, and genetics of class D beta-lactamases. Antimicrob Agents Chemother 54: 24-38. doi: 10.1128/AAC.01512-08 PMID: 19721065
-
(2010)
Antimicrob Agents Chemother
, vol.54
, pp. 24-38
-
-
Poirel, L.1
Naas, T.2
Nordmann, P.3
-
4
-
-
79956336224
-
Detection of the KPC gene in Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Acinetobacter baumannii during a PCR-based nosocomial surveillance study in Puerto Rico
-
PMID: 21444702
-
Robledo IE, Aquino EE, Vazquez GJ (2011) Detection of the KPC gene in Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Acinetobacter baumannii during a PCR-based nosocomial surveillance study in Puerto Rico. Antimicrob Agents Chemother 55: 2968-2970. doi: 10.1128/AAC.01633-10 PMID: 21444702
-
(2011)
Antimicrob Agents Chemother
, vol.55
, pp. 2968-2970
-
-
Robledo, I.E.1
Aquino, E.E.2
Vazquez, G.J.3
-
5
-
-
67749143997
-
Molecular epidemiology of KPC-producing Klebsiella pneumoniae isolates in the United States: Clonal expansion of multilocus sequence type 258
-
PMID: 19506063
-
Kitchel B, Rasheed JK, Patel JB, Srinivasan A, Navon-Venezia S, Carmeli Y, et al. (2009) Molecular epidemiology of KPC-producing Klebsiella pneumoniae isolates in the United States: clonal expansion of multilocus sequence type 258. Antimicrob Agents Chemother 53: 3365-3370. doi: 10.1128/AAC. 00126-09 PMID: 19506063
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 3365-3370
-
-
Kitchel, B.1
Rasheed, J.K.2
Patel, J.B.3
Srinivasan, A.4
Navon-Venezia, S.5
Carmeli, Y.6
-
6
-
-
84904788820
-
Clonality and Resistome analysis of KPC-producing Klebsiella pneumoniae strain isolated in Korea using whole genome sequencing
-
PMID: 25105122
-
Lee Y, Kim BS, Chun J, Yong JH, Lee YS, Yoo JS, et al. (2014) Clonality and Resistome analysis of KPC-producing Klebsiella pneumoniae strain isolated in Korea using whole genome sequencing. Biomed Res Int 2014: 352862. doi: 10.1155/2014/352862 PMID: 25105122
-
(2014)
Biomed Res Int
, vol.2014
, pp. 352862
-
-
Lee, Y.1
Kim, B.S.2
Chun, J.3
Yong, J.H.4
Lee, Y.S.5
Yoo, J.S.6
-
7
-
-
84916936754
-
Emergence of KPC-producing Klebsiella pneumoniae in Uruguay: Infection control and molecular characterization
-
PMID: 25356345
-
Marquez C, Ingold A, Echeverria N, Acevedo A, Vignoli R, Garcia-Fulgueiras V, et al. (2014) Emergence of KPC-producing Klebsiella pneumoniae in Uruguay: infection control and molecular characterization. New Microbes New Infect 2: 58-63. doi: 10.1002/nmi2.40 PMID: 25356345
-
(2014)
New Microbes New Infect
, vol.2
, pp. 58-63
-
-
Marquez, C.1
Ingold, A.2
Echeverria, N.3
Acevedo, A.4
Vignoli, R.5
Garcia-Fulgueiras, V.6
-
8
-
-
84880301557
-
First outbreak of KPC-3-producing Klebsiella pneumoniae (ST258) clinical isolates in a Mexican Medical Center
-
PMID: 23733454
-
Rodriguez-Zulueta P, Silva-Sanchez J, Barrios H, Reyes-Mar J, Velez-Perez F, Arroyo-Escalante S, et al. (2013) First outbreak of KPC-3-producing Klebsiella pneumoniae (ST258) clinical isolates in a Mexican Medical Center. Antimicrob Agents Chemother 57: 4086-4088. doi: 10.1128/AAC.02530-12 PMID: 23733454
-
(2013)
Antimicrob Agents Chemother
, vol.57
, pp. 4086-4088
-
-
Rodriguez-Zulueta, P.1
Silva-Sanchez, J.2
Barrios, H.3
Reyes-Mar, J.4
Velez-Perez, F.5
Arroyo-Escalante, S.6
-
9
-
-
84904015627
-
Epidemic Klebsiella pneumoniae ST258 is a hybrid strain
-
PMID: 24961694
-
Chen L, Mathema B, Pitout JD, DeLeo FR, Kreiswirth BN (2014) Epidemic Klebsiella pneumoniae ST258 is a hybrid strain. MBio 5: e01355-01314. doi: 10.1128/mBio.01355-14 PMID: 24961694
-
(2014)
MBio
, vol.5
, pp. e01355
-
-
Chen, L.1
Mathema, B.2
Pitout, J.D.3
DeLeo, F.R.4
Kreiswirth, B.N.5
-
10
-
-
84897487143
-
Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258 Klebsiella pneumoniae
-
PMID: 24639510
-
Deleo FR, Chen L, Porcella SF, Martens CA, Kobayashi SD, Porter AR, et al. (2014) Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258 Klebsiella pneumoniae. Proc Natl Acad Sci U S A 111: 4988-4993. doi: 10.1073/pnas.1321364111 PMID: 24639510
-
(2014)
Proc Natl Acad Sci U S A
, vol.111
, pp. 4988-4993
-
-
Deleo, F.R.1
Chen, L.2
Porcella, S.F.3
Martens, C.A.4
Kobayashi, S.D.5
Porter, A.R.6
-
11
-
-
84907202946
-
Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae
-
PMID: 25232178
-
Conlan S, Thomas PJ, Deming C, Park M, Lau AF, Dekker JP, et al. (2014) Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae. Sci Transl Med 6: 254ra126. doi: 10.1126/scitranslmed.3009845 PMID: 25232178
-
(2014)
Sci Transl Med
, vol.6
, pp. 254ra126
-
-
Conlan, S.1
Thomas, P.J.2
Deming, C.3
Park, M.4
Lau, A.F.5
Dekker, J.P.6
-
12
-
-
84923248071
-
Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. Pneumoniae at a Single Institution: Insights into Endemicity from Whole-Genome Sequencing
-
PMID: 25561339
-
Mathers AJ, Stoesser N, Sheppard AE, Pankhurst L, Giess A, Yeh AJ, et al. (2015) Klebsiella pneumoniae Carbapenemase (KPC)-Producing K. pneumoniae at a Single Institution: Insights into Endemicity from Whole-Genome Sequencing. Antimicrob Agents Chemother 59: 1656-1663. doi: 10.1128/AAC. 04292-14 PMID: 25561339
-
(2015)
Antimicrob Agents Chemother
, vol.59
, pp. 1656-1663
-
-
Mathers, A.J.1
Stoesser, N.2
Sheppard, A.E.3
Pankhurst, L.4
Giess, A.5
Yeh, A.J.6
-
13
-
-
84865323065
-
Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing
-
PMID: 22914622
-
Snitkin ES, Zelazny AM, Thomas PJ, Stock F, Henderson DK, Palmore TN, et al. (2012) Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing. Sci Transl Med 4: 148ra116. doi: 10.1126/scitranslmed.3004129 PMID: 22914622
-
(2012)
Sci Transl Med
, vol.4
, pp. 148ra116
-
-
Snitkin, E.S.1
Zelazny, A.M.2
Thomas, P.J.3
Stock, F.4
Henderson, D.K.5
Palmore, T.N.6
-
15
-
-
85083605161
-
-
ID Week. San Francisco, CA
-
McCool S, Clarke L, Querry A, Pasculle AW, Rack L, Neilsen C, et al. (2013) Carbapenem-resistant Enterobacteriacease (CRE) Klebsiella pneumonia (KP) Cluster Analysis. ID Week. San Francisco, CA.
-
(2013)
Carbapenem-resistant Enterobacteriacease (CRE) Klebsiella Pneumonia (KP) Cluster Analysis
-
-
McCool, S.1
Clarke, L.2
Querry, A.3
Pasculle, A.W.4
Rack, L.5
Neilsen, C.6
-
16
-
-
53749091581
-
Comparison of PFGE and multilocus sequence typing for analysis of Klebsiella pneumoniae isolates
-
PMID: 18809566
-
Vimont S, Mnif B, Fevre C, Brisse S (2008) Comparison of PFGE and multilocus sequence typing for analysis of Klebsiella pneumoniae isolates. J Med Microbiol 57: 1308-1310. doi: 10.1099/jmm.0.2008/003798-0 PMID: 18809566
-
(2008)
J Med Microbiol
, vol.57
, pp. 1308-1310
-
-
Vimont, S.1
Mnif, B.2
Fevre, C.3
Brisse, S.4
-
17
-
-
23744446161
-
Multilocus sequence typing of Klebsiella pneumoniae nosocomial isolates
-
PMID: 16081970
-
Diancourt L, Passet V, Verhoef J, Grimont PA, Brisse S (2005) Multilocus sequence typing of Klebsiella pneumoniae nosocomial isolates. J Clin Microbiol 43: 4178-4182. PMID: 16081970
-
(2005)
J Clin Microbiol
, vol.43
, pp. 4178-4182
-
-
Diancourt, L.1
Passet, V.2
Verhoef, J.3
Grimont, P.A.4
Brisse, S.5
-
18
-
-
60649091495
-
Characterization of blaKPC-containing Klebsiella pneumoniae isolates detected in different institutions in the Eastern USA
-
PMID: 19155227
-
Endimiani A, Hujer AM, Perez F, Bethel CR, Hujer KM, Kroeger J, et al. (2009) Characterization of blaKPC-containing Klebsiella pneumoniae isolates detected in different institutions in the Eastern USA. J Antimicrob Chemother 63: 427-437. doi: 10.1093/jac/dkn547 PMID: 19155227
-
(2009)
J Antimicrob Chemother
, vol.63
, pp. 427-437
-
-
Endimiani, A.1
Hujer, A.M.2
Perez, F.3
Bethel, C.R.4
Hujer, K.M.5
Kroeger, J.6
-
20
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
PMID: 19451168
-
Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760. doi: 10.1093/bioinformatics/btp324 PMID: 19451168
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
21
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
PMID: 19505943
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25: 2078-2079. doi: 10.1093/bioinformatics/btp352 PMID: 19505943
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
-
22
-
-
84899553363
-
RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies
-
PMID: 24451623
-
Stamatakis A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312-1313. doi: 10.1093/bioinformatics/btu033 PMID: 24451623
-
(2014)
Bioinformatics
, vol.30
, pp. 1312-1313
-
-
Stamatakis, A.1
-
23
-
-
0028924342
-
A general method for detecting and sizing large plasmids
-
PMID: 7793624
-
Barton BM, Harding GP, Zuccarelli AJ (1995) A general method for detecting and sizing large plasmids. Anal Biochem 226: 235-240. PMID: 7793624
-
(1995)
Anal Biochem
, vol.226
, pp. 235-240
-
-
Barton, B.M.1
Harding, G.P.2
Zuccarelli, A.J.3
-
24
-
-
27744561623
-
Characterization of the highly variable region surrounding the bla(CTX-M-9) gene in non-related Escherichia coli from Barcelona
-
PMID: 16188915
-
Garcia A, Navarro F, Miro E, Mirelis B, Campoy S, Coll P (2005) Characterization of the highly variable region surrounding the bla(CTX-M-9) gene in non-related Escherichia coli from Barcelona. J Antimicrob Chemother 56: 819-826. PMID: 16188915
-
(2005)
J Antimicrob Chemother
, vol.56
, pp. 819-826
-
-
Garcia, A.1
Navarro, F.2
Miro, E.3
Mirelis, B.4
Campoy, S.5
Coll, P.6
-
26
-
-
84880798154
-
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
-
PMID: 23644548
-
Chin CS, Alexander DH, Marks P, Klammer AA, Drake J, Heiner C, et al. (2013) Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data. Nat Methods 10: 563-569. doi: 10.1038/nmeth.2474 PMID: 23644548
-
(2013)
Nat Methods
, vol.10
, pp. 563-569
-
-
Chin, C.S.1
Alexander, D.H.2
Marks, P.3
Klammer, A.A.4
Drake, J.5
Heiner, C.6
-
27
-
-
84902590942
-
Resistance determinants and mobile genetic elements of an NDM-1-encoding Klebsiella pneumoniae strain
-
PMID: 24905728
-
Hudson CM, Bent ZW, Meagher RJ, Williams KP (2014) Resistance determinants and mobile genetic elements of an NDM-1-encoding Klebsiella pneumoniae strain. PLoS One 9: e99209. doi: 10.1371/journal.pone.0099209 PMID: 24905728
-
(2014)
PLoS One
, vol.9
, pp. e99209
-
-
Hudson, C.M.1
Bent, Z.W.2
Meagher, R.J.3
Williams, K.P.4
-
28
-
-
77957350912
-
Complete nucleotide sequence of KPC-3- encoding plasmid pKpQIL in the epidemic Klebsiella pneumoniae sequence type 258
-
PMID: 20696875
-
Leavitt A, Chmelnitsky I, Carmeli Y, Navon-Venezia S (2010) Complete nucleotide sequence of KPC-3- encoding plasmid pKpQIL in the epidemic Klebsiella pneumoniae sequence type 258. Antimicrob Agents Chemother 54: 4493-4496. doi: 10.1128/AAC.00175-10 PMID: 20696875
-
(2010)
Antimicrob Agents Chemother
, vol.54
, pp. 4493-4496
-
-
Leavitt, A.1
Chmelnitsky, I.2
Carmeli, Y.3
Navon-Venezia, S.4
-
29
-
-
84898636778
-
Comparative genomic analysis of KPC-encoding pKpQIL-like plasmids and their distribution in New Jersey and New York Hospitals
-
PMID: 24614371
-
Chen L, Chavda KD, Melano RG, Jacobs MR, Koll B, Hong T, et al. (2014) Comparative genomic analysis of KPC-encoding pKpQIL-like plasmids and their distribution in New Jersey and New York Hospitals. Antimicrob Agents Chemother 58: 2871-2877. doi: 10.1128/AAC.00120-14 PMID: 24614371
-
(2014)
Antimicrob Agents Chemother
, vol.58
, pp. 2871-2877
-
-
Chen, L.1
Chavda, K.D.2
Melano, R.G.3
Jacobs, M.R.4
Koll, B.5
Hong, T.6
-
30
-
-
84907690490
-
New Delhi metallobeta- lactamase-producing carbapenem-resistant Escherichia coli associated with exposure to duodenoscopes
-
PMID: 25291580
-
Epstein L, Hunter JC, Arwady MA, Tsai V, Stein L, Gribogiannis M, et al. (2014) New Delhi metallobeta- lactamase-producing carbapenem-resistant Escherichia coli associated with exposure to duodenoscopes. JAMA 312: 1447-1455. doi: 10.1001/jama.2014.12720 PMID: 25291580
-
(2014)
JAMA
, vol.312
, pp. 1447-1455
-
-
Epstein, L.1
Hunter, J.C.2
Arwady, M.A.3
Tsai, V.4
Stein, L.5
Gribogiannis, M.6
-
31
-
-
77953563050
-
Endoscopy-associated transmission of carbapenem-resistant Klebsiella pneumoniae producing KPC-2 beta-lactamase
-
PMID: 20382724
-
Naas T, Cuzon G, Babics A, Fortineau N, Boytchev I, Gayral F, et al. (2010) Endoscopy-associated transmission of carbapenem-resistant Klebsiella pneumoniae producing KPC-2 beta-lactamase. J Antimicrob Chemother 65: 1305-1306. doi: 10.1093/jac/dkq117 PMID: 20382724
-
(2010)
J Antimicrob Chemother
, vol.65
, pp. 1305-1306
-
-
Naas, T.1
Cuzon, G.2
Babics, A.3
Fortineau, N.4
Boytchev, I.5
Gayral, F.6
-
32
-
-
84898543210
-
Klebsiella spp. in endoscopy-associated infections: We may only be seeing the tip of the iceberg
-
PMID: 24166131
-
Gastmeier P, Vonberg RP (2014) Klebsiella spp. in endoscopy-associated infections: we may only be seeing the tip of the iceberg. Infection 42: 15-21. doi: 10.1007/s15010-013-0544-6 PMID: 24166131
-
(2014)
Infection
, vol.42
, pp. 15-21
-
-
Gastmeier, P.1
Vonberg, R.P.2
-
33
-
-
84875750271
-
Transmission of infection by flexible gastrointestinal endoscopy and bronchoscopy
-
PMID: 23554415
-
Kovaleva J, Peters FT, van der Mei HC, Degener JE (2013) Transmission of infection by flexible gastrointestinal endoscopy and bronchoscopy. Clin Microbiol Rev 26: 231-254. doi: 10.1128/CMR.00085-12 PMID: 23554415
-
(2013)
Clin Microbiol Rev
, vol.26
, pp. 231-254
-
-
Kovaleva, J.1
Peters, F.T.2
Van Der Mei, H.C.3
Degener, J.E.4
|