The gill microbiota of invasive and indigenous Spondylus oysters from the Mediterranean Sea and northern Red Sea

Environmental Microbiology Reports

Volumn 7, Issue 6, 2015, Pages 860-867

  Roterman, Yahala Rina ^a   Benayahu, Yehuda ^a   Reshef, Lea ^a   Gophna, Uri ^a  

^a TEL AVIV UNIVERSITY   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

ANIMAL; BACTERIUM; BIODIVERSITY; CLASSIFICATION; GENETICS; GILL; INDIAN OCEAN; MEDITERRANEAN SEA; METAGENOME; METAGENOMICS; MICROBIOLOGY; MICROFLORA; OYSTER; PHYLOGENY; SEASON;

ANIMALS; BACTERIA; BIODIVERSITY; GILLS; INDIAN OCEAN; MEDITERRANEAN SEA; METAGENOME; METAGENOMICS; MICROBIOTA; OSTREIDAE; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEASONS;

EID: 84955207220     PISSN: None     EISSN: 17582229     Source Type: Journal    
DOI: 10.1111/1758-2229.12315     Document Type: Article

References (38)

1. Bao, W.-Y., Satuito, C.G., Yang, J.-L., and Kitamura, H. (2007) Larval settlement and metamorphosis of the mussel Mytilus galloprovincialis in response to biofilms. Mar Biol 150: 565-574.
2. Baumann, L., Thao, M.L., Funk, C.J., Falk, B.W., Ng, J.C.K., and Baumann, P. (2004) Sequence analysis of DNA fragments from the genome of the primary endosymbiont of the whitefly Bemisia tabaci. Curr Microbiol 48: 77-81.
3. Bayer, T., Arif, C., Ferrier-Pagès, C., Zoccola, D., Aranda, M., and Voolstra, C. (2013) Bacteria of the genus Endozoicomonas dominate the microbiome of the Mediterranean gorgonian coral Eunicella cavolini. Mar Ecol Prog Ser 479: 75-84.
4. Bayer, T., Neave, M.J., Alsheikh-Hussain, A., Aranda, M., Yum, L.K., Mincer, T., etal. (2013) The microbiome of the Red Sea coral Stylophora pistillata is dominated by tissue-associated Endozoicomonas bacteria. Appl Environ Microbiol 79: 4759-4762.
5. Beinart, R.A., Nyholm, S.V., Dubilier, N., and Girguis, P.R. (2014) Intracellular Oceanospirillales inhabit the gills of the hydrothermal vent snail Alviniconcha with chemosynthetic, γ-Proteobacterial symbionts. Environ Microbiol Rep 6: 656-664.
6. Berg, D. (1996) The indigenous gastrointestinal microflora. Trends Microbiol 4: 430-435.
7. Castro, D., Pujalte, M.J., Lopez-Cortes, L., Garay, E., and Borrego, J.J. (2002) Vibrios isolated from the cultured manila clam (Ruditapes philippinarum): numerical taxonomy and antibacterial activities. J Appl Microbiol 93: 438-447.
8. Çeviker, D., and Albayrak, S. (2006) Three alien molluscs from Iskenderun Bay (SE Turkey). Aquat Invasions 1: 76-79.
9. Crocetta, F., Bitar, G., Zibrowius, H., and Oliverio, M. (2013) Biogeographical homogeneity in the eastern Mediterranean Sea. II. Temporal variation in Lebanese bivalve biota. Aquat Biol 19: 75-84.
10. Fitt, W.K., Coon, S.L., Walch, M., Weiner, R.M., Colwell, R.R., and Bonar, D.B. (1990) Settlement behavior and metamorphosis of oyster larvae (Crassostrea gigas) in response to bacterial supernatants. Mar. Biol. 106: 389-394.
11. Hernández-Zárate, G., and Olmos-Soto, J. (2006) Identification of bacterial diversity in the oyster Crassostrea gigas by fluorescent in situ hybridization and polymerase chain reaction. J Appl Microbiol 100: 664-672.
12. Katoh, K., Misawa, K., Kuma, K., and Miyata, T. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 30: 3059-3066.
13. Katsanevakis, S., Tsiamis, K., Ioannou, G., Michailidis, N., and Zenetos, A. (2009) Inventory of alien marine species of Cyprus (2009). Mediterr Mar Sci 10: 109-133.
14. Kurahashi, M., and Yokota, A. (2007) Endozoicomonas elysicola gen. nov., sp. nov., a gamma-proteobacterium isolated from the sea slug Elysia ornata. Syst Appl Microbiol 30: 202-206.
15. Li, Z.-Y., He, L.-M., Wu, J., and Jiang, Q. (2006) Bacterial community diversity associated with four marine sponges from the South China Sea based on 16S rDNA-DGGE fingerprinting. J Exp Mar Bio Ecol 329: 75-85.
16. Mienis, H., Galili, E., and Rapoport, J. (1993) The spiny oyster, Spondylus spinosus, a well-established Indo-Pacific bivalve in the Eastern Mediterranean off Israel (Mollusca, Bivalvia, Spondylidae). Zool Middle East 9: 83-92.
17. Nishijima, M., Adachi, K., Katsuta, A., Shizuri, Y., and Yamasato, K. (2013) Endozoicomonas numazuensis sp. nov., a gammaproteobacterium isolated from marine sponges, and emended description of the genus Endozoicomonas Kurahashi and Yokota 2007. Int J Syst Evol Microbiol 63: 709-714.
18. Penn, K., Wu, D., Eisen, J.A., and Ward, N. (2006) Characterization of bacterial communities associated with deep-sea corals on Gulf of Alaska seamounts. Appl Environ Microbiol 72: 1680-1683.
19. Por, F.D. (1971) One hundred years of Suez Canal-a century of Lessepsian migration: retrospect and viewpoints. Syst Biol 20: 138-159.
20. Prieur, D., Mevel, G., Nicolas, J.L., Plusquellec, A., and Vigneulle, M. (1990) Interactions between bivalve molluscs and bacteria in the marine environment. Oceanogr Mar Biol Annu Rev 28: 277-352.
21. Romanenko, L.A., Uchino, M., Kalinovskaya, N.I., and Mikhailov, V.V. (2008) Isolation, phylogenetic analysis and screening of marine mollusc-associated bacteria for antimicrobial, hemolytic and surface activities. Microbiol Res 163: 633-644.
22. Santos-Garcia, D., Farnier, P.-A., Beitia, F., Zchori-Fein, E., Vavre, F., Mouton, L., etal. (2012) Complete genome sequence of 'Candidatus Portiera aleyrodidarum' BT-QVLC, an obligate symbiont that supplies amino acids and carotenoids to Bemisia tabaci. J Bacteriol 194: 6654-6655.
23. Satuito, C.G., Shimizu, K., and Fusetani, N. (1997) Studies on the factors influencing larval settlement in Balanus amphitrite and Mytilus galloprovincialis. Hydrobiologia 358: 275-280.
24. Schuett, C., Doepke, H., Grathoff, A., and Gedde, M. (2007) Bacterial aggregates in the tentacles of the sea anemone Metridium senile. Helgol Mar Res 61: 211-216.
25. Segata, N., Izard, J., Waldron, L., Gevers, D., Miropolsky, L., Garrett, W.S., and Huttenhower, C. (2011) Metagenomic biomarker discovery and explanation. Genome Biol 12: R60.
26. Shabtay, A. (2011) The invasive oyster Spondylus spinosus Schreibers, 1793 in the Israeli Mediterranean coast.
27. Shabtay, A., Tikochinski, Y., Benayahu, Y., and Rilov, G. (2013) Preliminary data on the genetic structure of a highly successful invading population of oyster suggesting its establishment dynamics in the Levant. Mar Biol Res 10: 407-415.
28. Slothouber Galbreath, J.G.M., Smith, J.E., Terry, R.S., Becnel, J.J., and Dunn, A.M. (2004) Invasion success of Fibrillanosema crangonycis, n.sp., n.g.: A novel vertically transmitted microsporidian parasite from the invasive amphipod host Crangonyx pseudogracilis. Int J Parasitol 34: 235-244.
29. Thiel, V., Leininger, S., Schmaljohann, R., Brümmer, F., and Imhoff, J.F. (2007) Sponge-specific bacterial associations of the Mediterranean sponge Chondrilla nucula (Demospongiae, Tetractinomorpha). Microb Ecol 54: 101-111.
30. Tritar, S., Prieur, D., and Weiner, R. (1992) Effects of bacterial on the settlement of oysters, Crassostrea gigas (Thunberg, 1793) and Ostrea edulis Linnaeus, 1750, and the scallop, Pecten maximus (Linnaeus, 1758). J Shellfish Res 11: 325-330.
31. Vermeij, G.J. (1996) An agenda for invasion biology. Biol Conserv 78: 3-9.
32. Waterbury, J.B., Bradford, C., and Turner, R.D. (1983) A cellulolytic nitrogen-fixing bacterium cultured from the gland of Deshayes in shipworms (Bivalvia: Teredinidae). Science 221: 1401-1403.
33. Webster, N.S., Smith, L.D., Heyward, A.J., Watts, J.E.M., Webb, R.I., Blackall, L.L., and Negri, A.P. (2004) Metamorphosis of a scleractinian coral in response to microbial biofilms. Appl Environ Microbiol 70: 1213-1221.
34. Wentrup, C., Wendeberg, A., Huang, J.Y., Borowski, C., and Dubilier, N. (2013) Shift from widespread symbiont infection of host tissues to specific colonization of gills in juvenile deep-sea mussels. ISME J 7: 1244-1247.
35. Yang, C.-S., Chen, M.-H., Arun, A.B., Chen, C.A., Wang, J.-T., and Chen, W.-M. (2010) Endozoicomonas montiporae sp. nov., isolated from the encrusting pore coral Montipora aequituberculata. Int J Syst Evol Microbiol 60: 1158-1162.
36. Zielinski, F.U., Pernthaler, A., Duperron, S., Raggi, L., Giere, O., Borowski, C., and Dubilier, N. (2009) Widespread occurrence of an intranuclear bacterial parasite in vent and seep bathymodiolin mussels. Environ Microbiol 11: 1150-1167.
37. Zurel, D., Benayahu, Y., Or, A., Kovacs, A., and Gophna, U. (2011) Composition and dynamics of the gill microbiota of an invasive Indo-Pacific oyster in the eastern Mediterranean Sea. Environ Microbiol 13: 1467-1476.
38. Zurel, D., Gophna, U., and Benayahu, Y. (2012) Parity and disparity between two Chama oysters: the reproductive biology of the Indo-Pacific C.pacifica Broderip, invasive to the Mediterranean Sea; and C.savignyi Lamy, indigenous to the Red Sea. Mar Ecol 33: 261-271.