Transmission dynamics of pandemic influenza A(H1N1)pdm09 virus in humans and swine in backyard farms in Tumbes, Peru

Influenza and other Respiratory Viruses

Volumn 10, Issue 1, 2016, Pages 47-56

  Tinoco, Yeny O ^a,b   Montgomery, Joel M ^a,c   Kasper, Mathew R ^a   Nelson, Martha I ^d   Razuri, Hugo ^a   Guezala, Maria C ^a   Azziz Baumgartner, Eduardo ^c   Widdowson, Marc Alain ^c   Barnes, John ^c   Gilman, Robert H ^b   Bausch, Daniel G ^a,e   Gonzalez, Armando E ^f  

^a Peru   (Peru)

^b JOHNS HOPKINS BLOOMBERG SCHOOL OF PUBLIC HEALTH   (United States)

^c CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^d NATIONAL INSTITUTES OF HEALTH   (United States)

^e TULANE UNIVERSITY   (United States)

^f UNIVERSIDAD NACIONAL MAYOR DE SAN MARCOS   (Peru)

Author keywords

Antibodies; Backyard pig farms; Human animal transmission; Influenza

Indexed keywords

ANTIBODY TITER; ARTICLE; CROSS-SECTIONAL STUDY; FEMALE; HEMAGGLUTINATION INHIBITION TEST; HUMAN; INCIDENCE; INFLUENZA A (H1N1); MALE; NONHUMAN; PANDEMIC INFLUENZA; PERU; PHYLOGENY; PIG; PIG FARMING; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEROPREVALENCE; VIRUS CULTURE; VIRUS ISOLATION; VIRUS TRANSMISSION; ZOONOSIS; ANIMAL; DISEASE TRANSMISSION; GENETICS; INFLUENZA; INFLUENZA A VIRUS; MOLECULAR GENETICS; ORTHOMYXOVIRIDAE INFECTIONS; PHYSIOLOGY; SWINE DISEASES; TRANSMISSION; VETERINARY;

ANIMALS; DISEASE TRANSMISSION, INFECTIOUS; HUMANS; INFLUENZA A VIRUS; INFLUENZA, HUMAN; MOLECULAR SEQUENCE DATA; ORTHOMYXOVIRIDAE INFECTIONS; PERU; PHYLOGENY; SUS SCROFA; SWINE; SWINE DISEASES;

EID: 84954493575     PISSN: 17502640     EISSN: 17502659     Source Type: Journal    
DOI: 10.1111/irv.12329     Document Type: Article

References (44)

1. Nelson MI, Gramer MR, Vincent AL, Holmes EC. Global transmission of influenza viruses from humans to swine. J Gen Virol 2012; 93(Pt 10):2195-2203.
2. Vijaykrishna D, Smith GJ, Pybus OG et al. Long-term evolution and transmission dynamics of swine influenza A virus. Nature 2011; 473:519-522.
3. Dawood FS, Jain S, Finelli L et al. Emergence of a novel swine-origin influenza A (H1N1) virus in humans. N Engl J Med 2009; 360:2605-2615.
4. Pasma T, Joseph T. Pandemic (H1N1) 2009 infection in swine herds, Manitoba, Canada. Emerg Infect Dis 2010; 16:706-708.
5. Trevennec K, Leger L, Lyazrhi F et al. Transmission of pandemic influenza H1N1 (2009) in Vietnamese swine in 2009-2010. Influenza Other Respir Viruses 2012; 6:348-357.
6. Kim SH, Moon OK, Lee KK et al. Outbreak of pandemic influenza (H1N1) 2009 in pigs in Korea. Vet Rec 2011; 169:155.
7. Moreno A, Di Trani L, Alborali L et al. First pandemic H1N1 outbreak from a pig farm in Italy. Open Virol J 2010; 4:52-56.
8. Njabo KY, Fuller TL, Chasar A et al. Pandemic A/H1N1/2009 influenza virus in swine, Cameroon, 2010. Vet Microbiol 2012; 156:189-192.
9. Forgie SE, Keenliside J, Wilkinson C et al. Swine outbreak of pandemic influenza A virus on a Canadian research farm supports human-to-swine transmission. Clin Infect Dis 2011; 52:10-18.
10. Kitikoon P, Sreta D, Tuanudom R et al. Serological evidence of pig-to-human influenza virus transmission on Thai swine farms. Vet Microbiol 2011; 148:413-418.
11. Sreta D, Tantawet S, Na Ayudhya SN et al. Pandemic (H1N1) 2009 virus on commercial swine farm, Thailand. Emerg Infect Dis 2010; 16:1587-1590.
12. Song MS, Lee JH, Pascua PN et al. Evidence of human-to-swine transmission of the pandemic (H1N1) 2009 influenza virus in South Korea. J Clin Microbiol 2010; 48:3204-3211.
13. Howden KJ, Brockhoff EJ, Caya FD et al. An investigation into human pandemic influenza virus (H1N1) 2009 on an Alberta swine farm. Can Vet J 2009; 50:1153-1161.
14. Perera HK, Wickramasinghe G, Cheung CL et al. Swine influenza in Sri Lanka. Emerg Infect Dis 2013; 19:481-484.
15. Pereda A, Cappuccio J, Quiroga MA et al. Pandemic (H1N1) 2009 outbreak on pig farm, Argentina. Emerg Infect Dis 2010; 16:304-307.
16. Ducatez MF, Hause B, Stigger-Rosser E et al. Multiple reassortment between pandemic (H1N1) 2009 and endemic influenza viruses in pigs, United States. Emerg Infect Dis 2011; 17:1624-1629.
17. Howard WA, Essen SC, Strugnell BW et al. Reassortant pandemic (H1N1) 2009 virus in pigs, United Kingdom. Emerg Infect Dis 2011; 17:1049-1052.
18. Starick E, Lange E, Fereidouni S et al. Reassorted pandemic (H1N1) 2009 influenza A virus discovered from pigs in Germany. J Gen Virol 2011; 92(Pt 5):1184-1188.
19. Vijaykrishna D, Poon LL, Zhu HC et al. Reassortment of pandemic H1N1/2009 influenza A virus in swine. Science 2010; 328:1529.
20. Zhu H, Zhou B, Fan X et al. Novel reassortment of Eurasian avian-like and pandemic/2009 influenza viruses in swine: infectious potential for humans. J Virol 2011; 85:10432-10439.
21. Karlsson E, Ciuoderis KA, Freiden P et al. Prevalence and characterization of influenza viruses in diverse species in Los Llanos, Colombia. Emerg Microbes Infect 2013; 2:e20.
22. McCune S, Arriola CS, Gilman RH et al. Interspecies interactions and potential influenza A virus risk in small swine farms in Peru. BMC Infect Dis 2012; 12:58.
23. Ministerio de Agricultura P. Sector Pecuario - Situación Porcina. Lima-Peru 2014. Available at http://www.minag.gob.pe/portal/sector-agrario/pecuaria/situacion-de-las-actividades-de-crianza-y-produccion/porcinos (Accessed 9 October 2014).
24. Razuri H, Romero C, Tinoco Y et al. Population-based active surveillance cohort studies for influenza: lessons from Peru. Bull World Health Organ 2012; 90:318-320.
25. Chowell G, Viboud C, Munayco CV et al. Spatial and temporal characteristics of the 2009 A/H1N1 influenza pandemic in Peru. PLoS One 2011; 6:e21287.
26. Garcia HH, Gonzalez AE, Rodriguez S et al. [Epidemiology and control of cysticercosis in Peru]. Rev Peru Med Exp Salud Publica 2010; 27:592-597.
27. Gilman RH, Gonzalez AE, Llanos-Zavalaga F, Tsang VC, Garcia HH. Prevention and control of Taenia solium taeniasis/cysticercosis in Peru. Pathog Glob Health 2012; 106:312-318.
28. WHO. WHO Manual on Animal Influenza Diagnosis and Surveillance. Geneva: World Health Organization, Response DoCDSa, 2002.
29. Valheim M, Gamlem H, Gjerset B, Germundsson A, Lium B. Pathological findings and distribution of pandemic influenza A (H1N1) 2009 virus in lungs from naturally infected fattening pigs in Norway. Influenza Res Treat 2011; 2011:565787.
30. Tinoco Y, Razuri H, Ortiz EJ et al. Preliminary population-based epidemiological and clinical data on 2009 pandemic H1N1 influenza A (pH1N1) from Lima, Peru. Influenza Other Respir Viruses 2009; 3:253-256.
31. CDC. Serologic detection of human influenza virus infections by hemagglutination-inhibition assay using turkey RBCs [SOP]. SOP No LP-003, 2009; 20.
32. Health WOfA. Manual of Diagnostic Tests and Vaccines for Terrestrial Animals (Mammals, Birds, and Bees). Paris: Health WOfA, 2008.
33. Hoffmann E, Stech J, Guan Y, Webster RG, Perez DR. Universal primer set for the full-length amplification of all influenza A viruses. Arch Virol 2001; 146:2275-2289.
34. WHO. CDC protocol of realtime RTPCR for influenza A(H1N1) 2009 updated (6 October 2009); 28 April 2009: Available at http://www.who.int/csr/resources/publications/swineflu/CDCRealtimeRTPCR_SwineH1Assay-2009_20090430.pdf (Accessed 15 November 2014).
35. Chenna R, Sugawara H, Koike T et al. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res 2003; 31:3497-3500.
36. Nelson M, Spiro D, Wentworth D et al. The early diversification of influenza A/H1N1pdm. PLoS Curr 2009; 1:RRN1126.
37. Renshaw HW. Influence of antibody-mediated immune suppression on clinical, viral, and immune responses to swine influenza infection. Am J Vet Res 1975; 36:5-13.
38. Fleck RBA. Evaluation of a maternal antibody decay curve for H1N1 swine influenza virus using the hemagglutination inhibition and the IDEXX ELISA tests. American Association of Swine Veterinarians.
39. Thacker B, editor. Vaccination strategies for swine influenza virus. Keeping pace with SIV: Proceedings from the Allen D Leman Swine Conference; 2000. Minneapolis, MN.
40. Lange E, Kalthoff D, Blohm U et al. Pathogenesis and transmission of the novel swine-origin influenza virus A/H1N1 after experimental infection of pigs. J Gen Virol 2009; 90(Pt 9):2119-2123.
41. Levin KA. Study design III: cross-sectional studies. Evid Based Dent 2006; 7:24-25.
42. Pereda A, Rimondi A, Cappuccio J et al. Evidence of reassortment of pandemic H1N1 influenza virus in swine in Argentina: are we facing the expansion of potential epicenters of influenza emergence? Influenza Other Respir Viruses 2011; 5:409-412.
43. Chiapponi C, Baioni L, Luppi A, Moreno A, Castellan A, Foni E. Full-genome sequence of a reassortant H1N1 swine influenza virus isolated from pigs in Italy. Genome Announc 2013; 1:e00778-13.
44. Fan X, Zhu H, Zhou B et al. Emergence and dissemination of a swine H3N2 reassortant influenza virus with 2009 pandemic H1N1 genes in pigs in China. J Virol 2012; 86:2375-2378.