메뉴 건너뛰기




Volumn 62, Issue 1, 2016, Pages 198-207

An empirical approach to signature peptide choice for selected reaction monitoring: Quantification of uromodulin in urine

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDE; TAMM HORSFALL GLYCOPROTEIN; BIOLOGICAL MARKER;

EID: 84954484400     PISSN: 00099147     EISSN: 15308561     Source Type: Journal    
DOI: 10.1373/clinchem.2015.242495     Document Type: Article
Times cited : (18)

References (28)
  • 1
    • 33645721632 scopus 로고    scopus 로고
    • Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
    • Anderson L, Hunter CL. Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins. Mol Cell Proteomics 2006;5:573-88.
    • (2006) Mol Cell Proteomics , vol.5 , pp. 573-588
    • Anderson, L.1    Hunter, C.L.2
  • 2
    • 84883189721 scopus 로고    scopus 로고
    • Development of MRM-based assays for the absolute quantitation of plasma proteins
    • Kuzyk MA, Parker CE, Domanski D, Borchers CH. Development of MRM-based assays for the absolute quantitation of plasma proteins. Methods Mol Biol 2013;1023:53-82.
    • (2013) Methods Mol Biol , vol.1023 , pp. 53-82
    • Kuzyk, M.A.1    Parker, C.E.2    Domanski, D.3    Borchers, C.H.4
  • 3
    • 59149084542 scopus 로고    scopus 로고
    • Targeted proteomic strategy for clinical biomarker discovery
    • Schiess R, Wollscheid B, Aebersold R. Targeted proteomic strategy for clinical biomarker discovery. Mol Oncol 2009;3:33-44.
    • (2009) Mol Oncol , vol.3 , pp. 33-44
    • Schiess, R.1    Wollscheid, B.2    Aebersold, R.3
  • 5
    • 84884670407 scopus 로고    scopus 로고
    • Using pure protein to build a multiple reaction monitoring mass spectrometry assay for targeted detection and quantitation
    • Grote E, Fu Q, Ji W, Liu X, Van Eyk JE. Using pure protein to build a multiple reaction monitoring mass spectrometry assay for targeted detection and quantitation. Methods Mol Biol 2013;1005:199-213.
    • (2013) Methods Mol Biol , vol.1005 , pp. 199-213
    • Grote, E.1    Fu, Q.2    Ji, W.3    Liu, X.4    Van Eyk, J.E.5
  • 6
    • 84881130289 scopus 로고    scopus 로고
    • The effect ofcommon uromodulin variants on urinary protein level and gene transcription
    • Rampoldi L, Kottgen A, Devuyst O. The effect ofcommon uromodulin variants on urinary protein level and gene transcription. Kidney Int 2013;84:410-1.
    • (2013) Kidney Int , vol.84 , pp. 410-411
    • Rampoldi, L.1    Kottgen, A.2    Devuyst, O.3
  • 8
    • 2542464173 scopus 로고    scopus 로고
    • Medullary cystic kidney disease type 2
    • author reply 1143
    • Bleyer AJ, Hart TC. Medullary cystic kidney disease type 2. Am J Kidney Dis 2004;43:1142; author reply 1143.
    • (2004) Am J Kidney Dis , vol.43 , pp. 1142
    • Bleyer, A.J.1    Hart, T.C.2
  • 9
    • 80052264182 scopus 로고    scopus 로고
    • The rediscovery of uromodulin (Tamm-Horsfall protein): From tubulointerstitial nephropathy to chronic kidney disease
    • Rampoldi L, Scolari F, Amoroso A, Ghiggeri G, Devuyst O. The rediscovery of uromodulin (Tamm-Horsfall protein): from tubulointerstitial nephropathy to chronic kidney disease. Kidney Int 2011;80:338-47.
    • (2011) Kidney Int , vol.80 , pp. 338-347
    • Rampoldi, L.1    Scolari, F.2    Amoroso, A.3    Ghiggeri, G.4    Devuyst, O.5
  • 10
    • 67349175651 scopus 로고    scopus 로고
    • Multiple loci associated with indices of renal function and chronic kidney disease
    • Kottgen A, Glazer NL, Dehghan A, Hwang SJ, Katz R, Li M, et al. Multiple loci associated with indices of renal function and chronic kidney disease. Nat Genet 2009;41:712-7.
    • (2009) Nat Genet , vol.41 , pp. 712-717
    • Kottgen, A.1    Glazer, N.L.2    Dehghan, A.3    Hwang, S.J.4    Katz, R.5    Li, M.6
  • 11
    • 77957326576 scopus 로고    scopus 로고
    • Association of variants at UMOD with chronic kidney disease and kidney stones: Role of age and comorbid diseases
    • Gudbjartsson DF, Holm H, Indridason OS, Thorleifsson G, Edvardsson V, Sulem P, et al. Association of variants at UMOD with chronic kidney disease and kidney stones: role of age and comorbid diseases. PLoS genetics 2010;6:e1001039.
    • (2010) PLoS Genetics , vol.6 , pp. e1001039
    • Gudbjartsson, D.F.1    Holm, H.2    Indridason, O.S.3    Thorleifsson, G.4    Edvardsson, V.5    Sulem, P.6
  • 12
    • 78449233580 scopus 로고    scopus 로고
    • Genome-wide association study of blood pressure extremes identifies variant near umod associated with hypertension
    • Padmanabhan S, Melander O, Johnson T, Di Blasio AM, Lee WK, Gentilini D, et al. Genome-wide association study of blood pressure extremes identifies variant near umod associated with hypertension. PLoS genetics 2010;6:e1001177.
    • (2010) PLoS Genetics , vol.6 , pp. e1001177
    • Padmanabhan, S.1    Melander, O.2    Johnson, T.3    Di Blasio, A.M.4    Lee, W.K.5    Gentilini, D.6
  • 13
    • 84889887136 scopus 로고    scopus 로고
    • Common noncodingUMODgene variants induce salt-sensitive hypertension and kidney damage by increasing uromodulin expression
    • Trudu M, Janas S, Lanzani C, Debaix H, Schaeffer C, Ikehata M, et al. Common noncodingUMODgene variants induce salt-sensitive hypertension and kidney damage by increasing uromodulin expression. Nat Med 2013;19:1655-60.
    • (2013) Nat Med , vol.19 , pp. 1655-1660
    • Trudu, M.1    Janas, S.2    Lanzani, C.3    Debaix, H.4    Schaeffer, C.5    Ikehata, M.6
  • 14
    • 35649000519 scopus 로고    scopus 로고
    • Practical points in urinary proteomics
    • Thongboonkerd V. Practical points in urinary proteomics. J Proteome Res 2007;6:3881-90.
    • (2007) J Proteome Res , vol.6 , pp. 3881-3890
    • Thongboonkerd, V.1
  • 15
    • 84878644042 scopus 로고    scopus 로고
    • Targeted quantitation of proteins by mass spectrometry
    • Liebler DC, Zimmerman LJ. Targeted quantitation of proteins by mass spectrometry. Biochemistry 2013;52:3797-806.
    • (2013) Biochemistry , vol.52 , pp. 3797-3806
    • Liebler, D.C.1    Zimmerman, L.J.2
  • 16
    • 84860872156 scopus 로고    scopus 로고
    • The development of selected reaction monitoring methods for targeted proteomics via empirical refinement
    • Bereman MS, MacLean B, Tomazela DM, Liebler DC, MacCoss MJ. The development of selected reaction monitoring methods for targeted proteomics via empirical refinement. Proteomics 2012;12:1134-41.
    • (2012) Proteomics , vol.12 , pp. 1134-1141
    • Bereman, M.S.1    MacLean, B.2    Tomazela, D.M.3    Liebler, D.C.4    MacCoss, M.J.5
  • 21
    • 84879598151 scopus 로고    scopus 로고
    • Constrained selected reaction monitoring: Quantification of selected posttranslational modifications and protein isoforms
    • Liu X, Jin Z, O'Brien R, Bathon J, Dietz HC, Grote E, Van Eyk JE. Constrained selected reaction monitoring: quantification of selected posttranslational modifications and protein isoforms. Methods 2013;61:304-12.
    • (2013) Methods , vol.61 , pp. 304-312
    • Liu, X.1    Jin, Z.2    O'Brien, R.3    Bathon, J.4    Dietz, H.C.5    Grote, E.6    Van Eyk, J.E.7
  • 22
    • 84887924792 scopus 로고    scopus 로고
    • Absolute quantitation of proteins in human blood by multiplexed multiple reaction monitoring mass spectrometry
    • Percy AJ, Chambers AG, Parker CE, Borchers CH. Absolute quantitation of proteins in human blood by multiplexed multiple reaction monitoring mass spectrometry. Methods Mol Biol 2013;1000:167-89.
    • (2013) Methods Mol Biol , vol.1000 , pp. 167-189
    • Percy, A.J.1    Chambers, A.G.2    Parker, C.E.3    Borchers, C.H.4
  • 23
    • 0024591825 scopus 로고
    • The Atherosclerosis Risk in Communities (ARIC) study: Design and objectives. The ARIC investigators
    • The Atherosclerosis Risk in Communities (ARIC) study: design and objectives. The ARIC investigators. Am J Epidemiol 1989;129:687-702.
    • (1989) Am J Epidemiol , vol.129 , pp. 687-702
  • 25
    • 84903700861 scopus 로고    scopus 로고
    • From lost in translation to paradise found: Enabling protein biomarker method transfer by mass spectrometry
    • Grant RP, Hoofnagle AN. From lost in translation to paradise found: enabling protein biomarker method transfer by mass spectrometry. Clin Chem 2014;60:941-4.
    • (2014) Clin Chem , vol.60 , pp. 941-944
    • Grant, R.P.1    Hoofnagle, A.N.2
  • 26
    • 84865791474 scopus 로고    scopus 로고
    • Peptide production and decay rates affect the quantitative accuracy of protein cleavage isotope dilution mass spectrometry (PC-IDMS)
    • Shuford CM, Sederoff RR, Chiang VL, Muddiman DC. Peptide production and decay rates affect the quantitative accuracy of protein cleavage isotope dilution mass spectrometry (PC-IDMS). Mol Cell Proteomics 2012;11:814-23.
    • (2012) Mol Cell Proteomics , vol.11 , pp. 814-823
    • Shuford, C.M.1    Sederoff, R.R.2    Chiang, V.L.3    Muddiman, D.C.4
  • 27
    • 77951757994 scopus 로고    scopus 로고
    • Multiplex assays for biomarker research and clinical application: Translational science coming of age
    • Fu Q, Schoenhoff FS, Savage WJ, Zhang P, Van Eyk JE. Multiplex assays for biomarker research and clinical application: translational science coming of age. Proteomics Clin Appl 2010;4:271-84.
    • (2010) Proteomics Clin Appl , vol.4 , pp. 271-284
    • Fu, Q.1    Schoenhoff, F.S.2    Savage, W.J.3    Zhang, P.4    Van Eyk, J.E.5
  • 28
    • 84887212435 scopus 로고    scopus 로고
    • Development of epitope-blocking ELISA for universal detection of antibodies to human H5N1 influenza viruses
    • Prabakaran M, Ho HT, Prabhu N, Velumani S, Szyporta M, He F, et al. Development of epitope-blocking ELISA for universal detection of antibodies to human H5N1 influenza viruses. PLoS ONE 2009;4:e4566.
    • (2009) PLoS ONE , vol.4 , pp. e4566
    • Prabakaran, M.1    Ho, H.T.2    Prabhu, N.3    Velumani, S.4    Szyporta, M.5    He, F.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.