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Volumn 100, Issue 9, 2016, Pages 4189-4199

Discovery of pentangular polyphenols hexaricins A–C from marine Streptosporangium sp. CGMCC 4.7309 by genome mining

Author keywords

Genetic manipulation; Genome mining; Pentangular polyphenol; Polyketide synthase; Streptosporangium

Indexed keywords

BACTERIA; BIOCHEMISTRY; BIOINFORMATICS; BIOSYNTHESIS; KETONES; METABOLITES; MINING; PLANTS (BOTANY); SCAFFOLDS;

EID: 84954174761     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-015-7248-z     Document Type: Article
Times cited : (26)

References (33)
  • 1
    • 84895072793 scopus 로고    scopus 로고
    • Microbial genome mining for accelerated natural products discovery: is a renaissance in the making?
    • COI: 1:CAS:528:DC%2BC3sXhvFCjtrjL, PID: 2434296
    • Bachmann BO, Van Lanen SG, Baltz RH (2014) Microbial genome mining for accelerated natural products discovery: is a renaissance in the making? J Ind Microbiol Biotechnol 41(2):175–184
    • (2014) J Ind Microbiol Biotechnol , vol.41 , Issue.2 , pp. 175-184
    • Bachmann, B.O.1    Van Lanen, S.G.2    Baltz, R.H.3
  • 3
    • 14544294545 scopus 로고    scopus 로고
    • Bioactive Microbial Metabolites
    • COI: 1:CAS:528:DC%2BD2MXht1Cjsrs%3D, PID: 1581317
    • Berdy J (2005) Bioactive Microbial Metabolites. J Antibiot 58(1):1–26
    • (2005) J Antibiot , vol.58 , Issue.1 , pp. 1-26
    • Berdy, J.1
  • 5
    • 84895076285 scopus 로고    scopus 로고
    • Bioinformatics tools for genome mining of polyketide and non-ribosomal peptides
    • COI: 1:CAS:528:DC%2BC3sXhslWhsLvP, PID: 2417421
    • Boddy CN (2014) Bioinformatics tools for genome mining of polyketide and non-ribosomal peptides. J Ind Microbiol Biotechnol 41(2):443–450
    • (2014) J Ind Microbiol Biotechnol , vol.41 , Issue.2 , pp. 443-450
    • Boddy, C.N.1
  • 6
    • 78650502777 scopus 로고    scopus 로고
    • Antibiotic R2, a new angucyclinone compound from Streptosporangium sp. Sg3
    • COI: 1:CAS:528:DC%2BC3cXhsF2mtbvN, PID: 2094072
    • Boudjella H, Zitouni A, Coppel Y, Mathieu F, Monje MC, Sabaou N, Lebrihi A (2010) Antibiotic R2, a new angucyclinone compound from Streptosporangium sp. Sg3. J Antibiot 63(12):709–711
    • (2010) J Antibiot , vol.63 , Issue.12 , pp. 709-711
    • Boudjella, H.1    Zitouni, A.2    Coppel, Y.3    Mathieu, F.4    Monje, M.C.5    Sabaou, N.6    Lebrihi, A.7
  • 7
    • 84875651761 scopus 로고    scopus 로고
    • SpecDis: Quantifying the comparison of calculated and experimental electronic circular dichroism spectra
    • Bruhn T, Schaumlöffel A, Hemberger Y, Bringmann G (2013) SpecDis: Quantifying the comparison of calculated and experimental electronic circular dichroism spectra. Chirality 25(4):243–249
    • (2013) Chirality , vol.25 , Issue.4 , pp. 243-249
    • Bruhn, T.1    Schaumlöffel, A.2    Hemberger, Y.3    Bringmann, G.4
  • 8
    • 84895075252 scopus 로고    scopus 로고
    • Exploitation of the Streptomyces coelicolor A3(2) genome sequence for discovery of new natural products and biosynthetic pathways
    • COI: 1:CAS:528:DC%2BC3sXhvFWqtbjO, PID: 2432220
    • Challis GL (2014) Exploitation of the Streptomyces coelicolor A3(2) genome sequence for discovery of new natural products and biosynthetic pathways. J Ind Microbiol Biotechnol 41(2):219–232
    • (2014) J Ind Microbiol Biotechnol , vol.41 , Issue.2 , pp. 219-232
    • Challis, G.L.1
  • 9
    • 69949151717 scopus 로고    scopus 로고
    • In vivo investigation of the roles of FdmM and FdmM1 in fredericamycin biosynthesis unveiling a new family of oxygenases
    • COI: 1:CAS:528:DC%2BD1MXhtV2nsLvF, PID: 1962024
    • Chen Y, Wendt-Pienkoski E, Rajski SR, Shen B (2009) In vivo investigation of the roles of FdmM and FdmM1 in fredericamycin biosynthesis unveiling a new family of oxygenases. J Biol Chem 284(37):24735–24743
    • (2009) J Biol Chem , vol.284 , Issue.37 , pp. 24735-24743
    • Chen, Y.1    Wendt-Pienkoski, E.2    Rajski, S.R.3    Shen, B.4
  • 10
    • 78649898220 scopus 로고    scopus 로고
    • Characterization of FdmV as an amide synthetase for fredericamycin A biosynthesis in Streptomyces griseus ATCC 43944
    • COI: 1:CAS:528:DC%2BC3cXhsFSmsb7P, PID: 2092638
    • Chen Y, Wendt-Pienkowski E, Ju J, Lin S, Rajski SR, Shen B (2010) Characterization of FdmV as an amide synthetase for fredericamycin A biosynthesis in Streptomyces griseus ATCC 43944. J Biol Chem 285(50):38853–38860
    • (2010) J Biol Chem , vol.285 , Issue.50 , pp. 38853-38860
    • Chen, Y.1    Wendt-Pienkowski, E.2    Ju, J.3    Lin, S.4    Rajski, S.R.5    Shen, B.6
  • 12
    • 0031572413 scopus 로고    scopus 로고
    • High efficiency intergeneric conjugal transfer of plasmid DNA from Escherichia coli to methyl DNA-restricting streptomycetes
    • COI: 1:CAS:528:DyaK2sXmsVKltb0%3D, PID: 935120
    • Flett F, Mersinias V, Smith CP (1997) High efficiency intergeneric conjugal transfer of plasmid DNA from Escherichia coli to methyl DNA-restricting streptomycetes. FEMS Microbiol Lett 155(2):223–229
    • (1997) FEMS Microbiol Lett , vol.155 , Issue.2 , pp. 223-229
    • Flett, F.1    Mersinias, V.2    Smith, C.P.3
  • 15
    • 84876533617 scopus 로고    scopus 로고
    • Building phylogenetic trees from molecular data with MEGA
    • COI: 1:CAS:528:DC%2BC3sXlvFWgsb8%3D, PID: 2348661
    • Hall BG (2013) Building phylogenetic trees from molecular data with MEGA. Mol Biol Evol 30(5):1229–1235
    • (2013) Mol Biol Evol , vol.30 , Issue.5 , pp. 1229-1235
    • Hall, B.G.1
  • 16
    • 84901009939 scopus 로고    scopus 로고
    • Recent advances in genome-based polyketide discovery
    • COI: 1:CAS:528:DC%2BC2cXhsFyhsr7O, PID: 2476257
    • Helfrich EJ, Reiter S, Piel J (2014) Recent advances in genome-based polyketide discovery. Curr Opin Biotechnol 29:107–115
    • (2014) Curr Opin Biotechnol , vol.29 , pp. 107-115
    • Helfrich, E.J.1    Reiter, S.2    Piel, J.3
  • 18
    • 84886795914 scopus 로고    scopus 로고
    • The determinants of activity and specificity in actinorhodin type II polyketide ketoreductase
    • COI: 1:CAS:528:DC%2BC3sXhsVClsLvP, PID: 2403528
    • Javidpour P, Bruegger J, Srithahan S, Korman TP, Crump MP, Crosby J, Burkart MD, Tsai SC (2013) The determinants of activity and specificity in actinorhodin type II polyketide ketoreductase. Chem Biol 20(10):1225–1234
    • (2013) Chem Biol , vol.20 , Issue.10 , pp. 1225-1234
    • Javidpour, P.1    Bruegger, J.2    Srithahan, S.3    Korman, T.P.4    Crump, M.P.5    Crosby, J.6    Burkart, M.D.7    Tsai, S.C.8
  • 19
    • 84920272234 scopus 로고    scopus 로고
    • Mining soil metagenomes to better understand the evolution of natural product structural diversity: pentangular polyphenols as a case study
    • COI: 1:CAS:528:DC%2BC2cXitFOgs7%2FP, PID: 2552178
    • Kang HS, Brady SF (2014) Mining soil metagenomes to better understand the evolution of natural product structural diversity: pentangular polyphenols as a case study. J Am Chem Soc 136(52):18111–18119
    • (2014) J Am Chem Soc , vol.136 , Issue.52 , pp. 18111-18119
    • Kang, H.S.1    Brady, S.F.2
  • 21
    • 0030753178 scopus 로고    scopus 로고
    • Ligation independent cloning irrespective of restriction site compatibility
    • COI: 1:CAS:528:DyaK2sXmvFSku7Y%3D, PID: 932167
    • Li C, Evans RM (1997) Ligation independent cloning irrespective of restriction site compatibility. Nucleic Acids Res 25(20):4165–4166
    • (1997) Nucleic Acids Res , vol.25 , Issue.20 , pp. 4165-4166
    • Li, C.1    Evans, R.M.2
  • 22
    • 84922572979 scopus 로고    scopus 로고
    • An efficient blue-white screening based gene inactivation system for Streptomyces
    • COI: 1:CAS:528:DC%2BC2MXht1Oiurw%3D, PID: 2566678
    • Li P, Li J, Guo Z, Tang W, Han J, Meng X, Hao T, Zhu Y, Zhang L, Chen Y (2015) An efficient blue-white screening based gene inactivation system for Streptomyces. Appl Microbiol Biotechnol 99(4):1923–1933
    • (2015) Appl Microbiol Biotechnol , vol.99 , Issue.4 , pp. 1923-1933
    • Li, P.1    Li, J.2    Guo, Z.3    Tang, W.4    Han, J.5    Meng, X.6    Hao, T.7    Zhu, Y.8    Zhang, L.9    Chen, Y.10
  • 23
    • 77954815505 scopus 로고    scopus 로고
    • Isolation of the lysolipin gene cluster of Streptomyces tendae Tü 4042
    • COI: 1:CAS:528:DC%2BC3cXmvFyls78%3D, PID: 2039925
    • Lopez P, Hornung A, Welzel K, Unsin C, Wohlleben W, Weber T, Pelzer S (2010) Isolation of the lysolipin gene cluster of Streptomyces tendae Tü 4042. Gene 461(1–2):5–14
    • (2010) Gene , vol.461 , Issue.1-2 , pp. 5-14
    • Lopez, P.1    Hornung, A.2    Welzel, K.3    Unsin, C.4    Wohlleben, W.5    Weber, T.6    Pelzer, S.7
  • 25
    • 0342518010 scopus 로고
    • Distribution of the actinomycetes in soil. IV. The isolation and classification of the genus Streptosporangium
    • Nonomura H, Ohara Y (1960) Distribution of the actinomycetes in soil. IV. The isolation and classification of the genus Streptosporangium. J Ferment Bioeng 38:405–409
    • (1960) J Ferment Bioeng , vol.38 , pp. 405-409
    • Nonomura, H.1    Ohara, Y.2
  • 26
  • 28
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • COI: 1:CAS:528:DyaK2MXitlSgu74%3D, PID: 798441
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22(22):4673–4680
    • (1994) Nucleic Acids Res , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 29
    • 0028240445 scopus 로고
    • WS79089A, B and C, new endothelin converting enzyme inhibitors isolated from Streptosporangium roseum. No. 79089
    • COI: 1:CAS:528:DyaK2cXlt12msb4%3D, PID: 804006
    • Tsurumi Y, Ohhata N, Iwamoto T, Shigematsu N, Sakamoto K, Nishikawa M, Kiyoto S, Okuhara M (1994) WS79089A, B and C, new endothelin converting enzyme inhibitors isolated from Streptosporangium roseum. No. 79089. J Antibiot 47(6):619–630
    • (1994) J Antibiot , vol.47 , Issue.6 , pp. 619-630
    • Tsurumi, Y.1    Ohhata, N.2    Iwamoto, T.3    Shigematsu, N.4    Sakamoto, K.5    Nishikawa, M.6    Kiyoto, S.7    Okuhara, M.8
  • 30
    • 79851507787 scopus 로고    scopus 로고
    • Genomics-inspired discovery of natural products
    • COI: 1:CAS:528:DC%2BC3MXhvFKitLY%3D, PID: 2111166
    • Winter JM, Behnken S, Hertweck C (2011) Genomics-inspired discovery of natural products. Curr Opin Chem Biol 15(1):22–31
    • (2011) Curr Opin Chem Biol , vol.15 , Issue.1 , pp. 22-31
    • Winter, J.M.1    Behnken, S.2    Hertweck, C.3
  • 31
    • 34248586053 scopus 로고    scopus 로고
    • Molecular analysis of the benastatin biosynthetic pathway and genetic engineering of altered fatty acid-polyketide hybrids
    • COI: 1:CAS:528:DC%2BD2sXkt1ShsL4%3D, PID: 1743911
    • Xu Z, Schenk A, Hertweck C (2007) Molecular analysis of the benastatin biosynthetic pathway and genetic engineering of altered fatty acid-polyketide hybrids. J Am Chem Soc 129(18):6022–6030
    • (2007) J Am Chem Soc , vol.129 , Issue.18 , pp. 6022-6030
    • Xu, Z.1    Schenk, A.2    Hertweck, C.3
  • 32
    • 65549083361 scopus 로고    scopus 로고
    • Strategies for the discovery of new natural products by genome mining
    • COI: 1:CAS:528:DC%2BD1MXjsVaisr8%3D, PID: 1916583
    • Zerikly M, Challis GL (2009) Strategies for the discovery of new natural products by genome mining. Chembiochem 10(4):625–633
    • (2009) Chembiochem , vol.10 , Issue.4 , pp. 625-633
    • Zerikly, M.1    Challis, G.L.2
  • 33
    • 84858965936 scopus 로고    scopus 로고
    • Unveiling the post-PKS redox tailoring steps in biosynthesis of the type II polyketide antitumor antibiotic xantholipin
    • COI: 1:CAS:528:DC%2BC38XksFeisLc%3D, PID: 2244459
    • Zhang W, Wang L, Kong L, Wang T, Chu Y, Deng Z, You D (2012) Unveiling the post-PKS redox tailoring steps in biosynthesis of the type II polyketide antitumor antibiotic xantholipin. Chem Biol 19(3):422–432
    • (2012) Chem Biol , vol.19 , Issue.3 , pp. 422-432
    • Zhang, W.1    Wang, L.2    Kong, L.3    Wang, T.4    Chu, Y.5    Deng, Z.6    You, D.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.