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Volumn 6, Issue , 2016, Pages 1-9

Low diversity of planktonic bacteria in the tropical ocean

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[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84954102971     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep19054     Document Type: Article
Times cited : (63)

References (39)
  • 2
    • 44449137093 scopus 로고    scopus 로고
    • The microbial engines that drive Earth's biogeochemical cycles
    • Falkowski, P. G., Fenchel,T. & DeLong, E. F. The microbial engines that drive Earth's biogeochemical cycles. Science 320, 1034-1039 (2008).
    • (2008) Science , vol.320 , pp. 1034-1039
    • Falkowski, P.G.1    Fenchel, T.2    DeLong, E.F.3
  • 3
    • 34548718221 scopus 로고    scopus 로고
    • Microbial structuring of marine ecosystems
    • Azam, F. & Malfatti, F. Microbial structuring of marine ecosystems. Nat. Rev. Microbiol. 5, 782-791 (2007).
    • (2007) Nat. Rev. Microbiol. , vol.5 , pp. 782-791
    • Azam, F.1    Malfatti, F.2
  • 5
    • 79953002220 scopus 로고    scopus 로고
    • Nitrogen cycle of the open ocean: From genes to ecosystems
    • Zehr, J. P. & Kudela, R. M. Nitrogen cycle of the open ocean: from genes to ecosystems. Ann. Rev. Mar. Sci. 3, 197-225 (2011).
    • (2011) Ann. Rev. Mar. Sci. , vol.3 , pp. 197-225
    • Zehr, J.P.1    Kudela, R.M.2
  • 6
    • 45549109457 scopus 로고    scopus 로고
    • A latitudinal diversity gradient in planktonic marine bacteria
    • Fuhrman, J. A. et al. A latitudinal diversity gradient in planktonic marine bacteria. Proc. Natl. Acad. Sci. USA 105, 7774-7778 (2008).
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 7774-7778
    • Fuhrman, J.A.1
  • 7
    • 1542438057 scopus 로고    scopus 로고
    • On the generality of the latitudinal diversity gradient
    • Hillebrand, H. On the generality of the latitudinal diversity gradient. Am. Nat. 163, 192-211 (2004).
    • (2004) Am. Nat. , vol.163 , pp. 192-211
    • Hillebrand, H.1
  • 8
    • 3042722162 scopus 로고    scopus 로고
    • Strength, slope and variability of marine latitudinal gradients
    • Hillebrand, H. Strength, slope and variability of marine latitudinal gradients. Marine Ecology Progress Series 273, 251-267 (2004).
    • (2004) Marine Ecology Progress Series , vol.273 , pp. 251-267
    • Hillebrand, H.1
  • 10
    • 84890279798 scopus 로고    scopus 로고
    • Why are there so many species in the tropics?
    • Brown, J. H. Why are there so many species in the tropics? Journal of Biogeography 41, 8-22 (2014).
    • (2014) Journal of Biogeography , vol.41 , pp. 8-22
    • Brown, J.H.1
  • 11
    • 33846914243 scopus 로고    scopus 로고
    • Global patterns of diversity and community structure in marine bacterioplankton
    • Pommier, T. et al. Global patterns of diversity and community structure in marine bacterioplankton. Mol. Ecol. 16, 867-880 (2007).
    • (2007) Mol. Ecol. , vol.16 , pp. 867-880
    • Pommier, T.1
  • 13
    • 84867907470 scopus 로고    scopus 로고
    • Pole-to-pole biogeography of surface and deep marine bacterial communities
    • Ghiglione, J. F. et al. Pole-to-pole biogeography of surface and deep marine bacterial communities. Proc. Natl. Acad. Sci. USA 109, 17633-17638 (2012).
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 17633-17638
    • Ghiglione, J.F.1
  • 14
    • 84883172257 scopus 로고    scopus 로고
    • Global marine bacterial diversity peaks at high latitudes in winter
    • Ladau, J. et al. Global marine bacterial diversity peaks at high latitudes in winter. ISME. J. 7, 1669-1677 (2013).
    • (2013) ISME. J. , vol.7 , pp. 1669-1677
    • Ladau, J.1
  • 15
    • 0025205482 scopus 로고
    • Evidence for a simple relationship between natural fluorescence, photosynthesis and chlorophyll in the sea
    • Chamberlin, W. S., Booth, C. R., Kiefer, D. A., Morrow, J. H. & Murphy, R. C. Evidence for a simple relationship between natural fluorescence, photosynthesis and chlorophyll in the sea. Deep Sea Research 37, 951-973 (1990).
    • (1990) Deep Sea Research , vol.37 , pp. 951-973
    • Chamberlin, W.S.1    Booth, C.R.2    Kiefer, D.A.3    Morrow, J.H.4    Murphy, R.C.5
  • 16
    • 84929997716 scopus 로고    scopus 로고
    • Ocean plankton. Determinants of community structure in the global plankton interactome
    • Lima-Mendez, G. et al. Ocean plankton. Determinants of community structure in the global plankton interactome. Science. 348, 1262073 (2015).
    • (2015) Science , vol.348 , pp. 1262073
    • Lima-Mendez, G.1
  • 17
    • 84929992013 scopus 로고    scopus 로고
    • Ocean plankton. Structure and function of the global ocean microbiome
    • Sunagawa, S. et al. Ocean plankton. Structure and function of the global ocean microbiome. Science. 348, 1261359 (2015).
    • (2015) Science , vol.348 , pp. 1261359
    • Sunagawa, S.1
  • 18
    • 84857029292 scopus 로고    scopus 로고
    • Seasonality in ocean microbial communities
    • Giovannoni, S. J. & Vergin, K. L. Seasonality in ocean microbial communities. Science. 335, 671-676 (2012).
    • (2012) Science , vol.335 , pp. 671-676
    • Giovannoni, S.J.1    Vergin, K.L.2
  • 19
    • 33751059692 scopus 로고    scopus 로고
    • The marine viromes of four oceanic regions
    • Angly, F. E. et al. The marine viromes of four oceanic regions. PLoS. Biol. 4, e368 (2006).
    • (2006) PLoS. Biol. , vol.4 , pp. e368
    • Angly, F.E.1
  • 20
    • 84929998256 scopus 로고    scopus 로고
    • Ocean plankton. Patterns and ecological drivers of ocean viral communities
    • Brum, J. R. et al. Ocean plankton. Patterns and ecological drivers of ocean viral communities. Science. 348, 1261498 (2015).
    • (2015) Science , vol.348 , pp. 1261498
    • Brum, J.R.1
  • 21
    • 0035413667 scopus 로고    scopus 로고
    • K-selection, alpha-selection, effectiveness, and tolerance in competition: Density-dependent selection revisited
    • Joshi, A., Prasad, N. G. & Shakarad, M. K-selection, alpha-selection, effectiveness, and tolerance in competition: density-dependent selection revisited. J Genet. 80, 63-75 (2001).
    • (2001) J Genet. , vol.80 , pp. 63-75
    • Joshi, A.1    Prasad, N.G.2    Shakarad, M.3
  • 22
    • 84899759560 scopus 로고    scopus 로고
    • The strengths of r- and K-selection shape diversity-disturbance relationships
    • Bohn, K., Pavlick, R., Reu, B. & Kleidon, A. The strengths of r- and K-selection shape diversity-disturbance relationships. PLoS One. 9, e95659 (2014).
    • (2014) PLoS One , vol.9
    • Bohn, K.1    Pavlick, R.2    Reu, B.3    Kleidon, A.4
  • 23
    • 70349458100 scopus 로고    scopus 로고
    • The genomic basis of trophic strategy in marine bacteria
    • Lauro, F. M. et al. The genomic basis of trophic strategy in marine bacteria. Proc. Natl. Acad. Sci. USA. 106, 15527-15533 (2009).
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 15527-15533
    • Lauro, F.M.1
  • 24
    • 84868369211 scopus 로고    scopus 로고
    • Streamlining and core genome conservation among highly divergent members of the SAR11 clade
    • Grote, J. et al. Streamlining and core genome conservation among highly divergent members of the SAR11 clade. MBio. 3, e00252-12 (2012).
    • (2012) MBio , vol.3 , pp. e00252-e00312
    • Grote, J.1
  • 25
    • 84879932140 scopus 로고    scopus 로고
    • Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean
    • Swan, B. K. et al. Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean. Proc. Natl. Acad. Sci. USA 110, 11463-11468 (2013).
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 11463-11468
    • Swan, B.K.1
  • 26
    • 84904997234 scopus 로고    scopus 로고
    • Implications of streamlining theory for microbial ecology
    • Giovannoni, S. J., Cameron, T. J. & Temperton, B. Implications of streamlining theory for microbial ecology. ISME J 8, 1553-1565 (2014).
    • (2014) ISME J , vol.8 , pp. 1553-1565
    • Giovannoni, S.J.1    Cameron, T.J.2    Temperton, B.3
  • 27
    • 84895074799 scopus 로고    scopus 로고
    • Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches
    • Wemheuer, B. et al. Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches. FEMS Microbiol. Ecol. 87, 378-389 (2014).
    • (2014) FEMS Microbiol. Ecol. , vol.87 , pp. 378-389
    • Wemheuer, B.1
  • 28
    • 84887704068 scopus 로고    scopus 로고
    • Microbial mechanisms coupling carbon and phosphorus cycles in phosphorus-limited northern Adriatic Sea
    • Malfatti, F. et al. Microbial mechanisms coupling carbon and phosphorus cycles in phosphorus-limited northern Adriatic Sea. Sci. Total. Environ. 470-471, 1173-1183 (2014).
    • (2014) Sci. Total. Environ. , vol.470-471 , pp. 1173-1183
    • Malfatti, F.1
  • 29
    • 84923358931 scopus 로고    scopus 로고
    • Illumina sequencing-based analysis of free-living bacterial community dynamics during an Akashiwo sanguine bloom in Xiamen sea
    • Yang, C. et al. Illumina sequencing-based analysis of free-living bacterial community dynamics during an Akashiwo sanguine bloom in Xiamen sea, China. Sci. Rep. 5, 8476 (2015).
    • (2015) China. Sci. Rep. , vol.5 , pp. 8476
    • Yang, C.1
  • 30
    • 84860488672 scopus 로고    scopus 로고
    • Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom
    • Teeling, H. et al. Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom. Science 336, 608-611 (2012).
    • (2012) Science , vol.336 , pp. 608-611
    • Teeling, H.1
  • 31
    • 84928999701 scopus 로고    scopus 로고
    • Bacterial and archaeal biogeography of the deep chlorophyll maximum in the South Pacific Gyre
    • Walsh, E. A., Smith, D. C., Sogin, M. L. & D'Hondt, S. Bacterial and archaeal biogeography of the deep chlorophyll maximum in the South Pacific Gyre. Aquatic microbial ecology 75, 1-13 (2015).
    • (2015) Aquatic Microbial Ecology , vol.75 , pp. 1-13
    • Walsh, E.A.1    Smith, D.C.2    Sogin, M.L.3    D'Hondt, S.4
  • 32
    • 78650623430 scopus 로고    scopus 로고
    • Distribution of Roseobacter RCA and SAR11 lineages in the North Sea and characteristics of an abundant RCA isolate
    • Giebel, H. A. et al. Distribution of Roseobacter RCA and SAR11 lineages in the North Sea and characteristics of an abundant RCA isolate. ISME J 5, 8-19 (2011).
    • (2011) ISME J , vol.5 , pp. 8-19
    • Giebel, H.A.1
  • 33
    • 0033865159 scopus 로고    scopus 로고
    • Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities
    • Gasol, J. M. & Del Giorgio, P. A. Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities. Scientia Marina 64, 197-224 (2000).
    • (2000) Scientia Marina , vol.64 , pp. 197-224
    • Gasol, J.M.1    Del Giorgio, P.A.2
  • 35
    • 84906944491 scopus 로고    scopus 로고
    • Comparing the anterior nare bacterial community of two discrete human populations using Illumina amplicon sequencing
    • Camarinha-Silva, A. et al. Comparing the anterior nare bacterial community of two discrete human populations using Illumina amplicon sequencing. Environ. Microbiol. 16, 2939-2952 (2014).
    • (2014) Environ. Microbiol. , vol.16 , pp. 2939-2952
    • Camarinha-Silva, A.1
  • 36
    • 84921328229 scopus 로고    scopus 로고
    • High-resolution taxonomic profiling of the subgingival microbiome for biomarker discovery and periodontitis diagnosis
    • Szafranski, S. P. et al. High-resolution taxonomic profiling of the subgingival microbiome for biomarker discovery and periodontitis diagnosis. Appl. Environ. Microbiol. 81, 1047-1058 (2015).
    • (2015) Appl. Environ. Microbiol. , vol.81 , pp. 1047-1058
    • Szafranski, S.P.1
  • 37
    • 84855589634 scopus 로고    scopus 로고
    • In-depth characterization via complementing culture-independent approaches of the microbial community in an acidic hot spring of the Colombian Andes
    • Bohorquez, L. C. et al. In-depth characterization via complementing culture-independent approaches of the microbial community in an acidic hot spring of the Colombian Andes. Microb. Ecol. 63, 103-115 (2012).
    • (2012) Microb. Ecol. , vol.63 , pp. 103-115
    • Bohorquez, L.C.1
  • 38
    • 84864134721 scopus 로고    scopus 로고
    • SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
    • Pruesse, E., Peplies, J. & Glockner, F. O. SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes. Bioinformatics. 28, 1823-1829 (2012).
    • (2012) Bioinformatics , vol.28 , pp. 1823-1829
    • Pruesse, E.1    Peplies, J.2    Glockner, F.O.3
  • 39
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse, E. et al. SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res. 35, 7188-7196 (2007).
    • (2007) Nucleic Acids Res. , vol.35 , pp. 7188-7196
    • Pruesse, E.1


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