Viral persistence in surface and drinking water: Suitability of PCR pre-treatment with intercalating dyes

Water Research

Volumn 91, Issue , 2016, Pages 68-76

  Prevost, B ^a   Goulet, M ^b   Lucas, F S ^a   Joyeux, M ^b   Moulin, L ^b   Wurtzer, S ^b  

^a AGROPARISTECH   (France)

^b EAU de Paris   (France)

Author keywords

Drinking water; EMA; Enteric viruses; Persistence; PMA; Surface water

Indexed keywords

CHLORINATION; GENES; MOLECULAR BIOLOGY; NUCLEIC ACIDS; PLANTS (BOTANY); POLYMERASE CHAIN REACTION; RISK PERCEPTION; SURFACE WATERS; TEMPERATURE; VIRUSES; WATER; WATER TREATMENT;

DISINFECTION TREATMENTS; DRINKING WATER PLANTS; DRINKING WATER SAMPLES; EMA; ENTERIC VIRUS; INFECTIOUS PARTICLES; PERSISTENCE; PMA;

POTABLE WATER;

CHLORINE; DRINKING WATER; RIVER WATER; SURFACE WATER; COLORING AGENT; FRESH WATER; INTERCALATING AGENT;

DRINKING WATER; DYE; GENOME; POLYMERASE CHAIN REACTION; SURFACE WATER; VIRUS; WATER TEMPERATURE; WATER TREATMENT;

ADENOVIRIDAE; ARTICLE; CHLORINATION; CONTROLLED STUDY; ENTERIC VIRUS; ENTEROVIRUS; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ULTRAVIOLET RADIATION; VIRAL CONTAMINATION; VIRUS GENOME; VIRUS INFECTIVITY; VIRUS LOAD; WATER CONTAMINATION; WATER QUALITY; WATER TEMPERATURE; DISINFECTION; ENVIRONMENTAL MONITORING; HALOGENATION; ISOLATION AND PURIFICATION; PROCEDURES; VIROLOGY; VIRUS;

ADENOVIRIDAE; COXSACKIEVIRUS; MIRIDAE;

ADENOVIRIDAE; COLORING AGENTS; DISINFECTION; DRINKING WATER; ENTEROVIRUS; ENVIRONMENTAL MONITORING; FRESH WATER; HALOGENATION; INTERCALATING AGENTS; POLYMERASE CHAIN REACTION; ULTRAVIOLET RAYS; VIRUSES;

EID: 84953439291     PISSN: 00431354     EISSN: 18792448     Source Type: Journal    
DOI: 10.1016/j.watres.2015.12.049     Document Type: Article

References (34)

1. Allmann E., Pan L., Li L., Li D., Wang S., Lu Y. Presence of enteroviruses in recreational water in Wuhan, China. J. Virol. Methods 2013, 193(2):327-331.
2. Cheong S., Lee C., Song S.W., Choi W.C., Lee C.H., Kim S.J. Enteric viruses in raw vegetables and groundwater used for irrigation in South Korea. Appl. Environ. Microbiol. 2009, 75(24):7745-7751.
3. Coudray-Meunier C., Fraisse A., Martin-Latil S., Guillier L., Perelle S. Discrimination of infectious hepatitis A virus and rotavirus by combining dyes and surfactants with RT-qPCR. BMC Microbiol. 2013, 13:216.
4. Ehlers M.M., Grabow W.O., Pavlov D.N. Detection of enteroviruses in untreated and treated drinking water supplies in South Africa. Water Res. 2005, 39(11):2253-2258.
5. Eischeid A.C., Linden K.G. Molecular indications of protein damage in adenoviruses after UV disinfection. Appl. Environ. Microbiol. 2011, 77(3):1145-1147.
6. Eischeid A.C., Meyer J.N., Linden K.G. UV disinfection of adenoviruses: molecular indications of DNA damage efficiency. Appl. Environ. Microbiol. 2009, 75(1):23-28.
7. Gallimore C.I., Lewis D., Taylor C., Cant A., Gennery A., Gray J.J. Chronic excretion of a norovirus in a child with cartilage hair hypoplasia (CHH). J. Clin. Virol. Off. Publ. Pan Am. Soc. Clin. Virol. 2004, 30(2):196-204.
8. Gerba C.P., Gramos D.M., Nwachuku N. Comparative inactivation of enteroviruses and adenovirus 2 by UV light. Appl. Environ. Microbiol. 2002, 68(10):5167-5169.
9. Gibson K.E., Opryszko M.C., Schissler J.T., Guo Y., Schwab K.J. Evaluation of human enteric viruses in surface water and drinking water resources in southern Ghana. Am. J. Trop. Med. Hyg. 2011, 84(1):20-29.
10. Grondahl-Rosado R.C., Yarovitsyna E., Trettenes E., Myrmel M., Robertson L.J. A one Year study on the concentrations of norovirus and enteric adenoviruses in wastewater and A surface drinking water source in Norway. Food Environ. Virol. December 2014, 6(4):232-245.
11. Haramoto E., Katayama H., Oguma K., Ohgaki S. Recovery of naked viral genomes in water by virus concentration methods. J. Virol. Methods 2007, 142(1-2):169-173.
12. Haramoto E., Kitajima M., Otagiri M. Development of a reverse transcription-quantitative PCR assay for detection of salivirus/klassevirus. Appl. Environ. Microbiol. 2013, 79(11):3529-3532.
13. Heerden J., Ehlers M.M., Vivier J.C., Grabow W.O. Risk assessment of adenoviruses detected in treated drinking water and recreational water. J. Appl. Microbiol. 2005, 99(4):926-933.
14. Hierhlzer, J.C. and Killington, R.A. (eds), 1996. Academic Press, London.
15. Iritani N., Kaida A., Abe N., Kubo H., Sekiguchi J., Yamamoto S.P., Goto K., Tanaka T., Noda M. Detection and genetic characterization of human enteric viruses in oyster-associated gastroenteritis outbreaks between 2001 and 2012 in Osaka City, Japan. J. Med. Virol. 2014, 86(12):2019-2025.
16. Karim M.R., Fout G.S., Johnson C.H., White K.M., Parshionikar S.U. Propidium monoazide reverse transcriptase PCR and RT-qPCR for detecting infectious enterovirus and norovirus. J. Virol. Methods 2015, 219:51-61.
17. Kim K., Katayama H., Kitajima M., Tohya Y., Ohgaki S. Development of a real-time RT-PCR assay combined with ethidium monoazide treatment for RNA viruses and its application to detect viral RNA after heat exposure. Water Sci. Technol. A J. Int. Assoc. Water Pollut. Res. 2011, 63(3):502-507.
18. Kitajima M., Gerba C.P. Aichi virus 1: environmental occurrence and behavior. Pathogens 2015, 4(2):256-268.
19. Kluge M., Fleck J.D., Soliman M.C., Luz R.B., Fabres R.B., Comerlato J., Silva J.V., Staggemeier R., Vecchia A.D., Capalonga R., Oliveira A.B., Henzel A., Rigotto C., Spilki F.R. Human adenovirus (HAdV), human enterovirus (hEV), and genogroup A rotavirus (GARV) in tap water in southern Brazil. J. Water Health 2014, 12(3):526-532.
20. Kokkinos P., Kozyra I., Lazic S., Bouwknegt M., Rutjes S., Willems K., Moloney R., de Roda Husman A.M., Kaupke A., Legaki E., D'Agostino M., Cook N., Rzezutka A., Petrovic T., Vantarakis A. Harmonised investigation of the occurrence of human enteric viruses in the leafy green vegetable supply chain in three European countries. Food Environ. Virol. 2012, 4(4):179-191.
21. Leifels M., Jurzik L., Wilhelm M., Hamza I.A. Use of ethidium monoazide and propidium monoazide to determine viral infectivity upon inactivation by heat, UV- exposure and chlorine. Int. J. Hyg. Environ. Health 2015, 218(8):686-693.
22. Loury P., Le Guyader F.S., Le Saux J.C., Ambert-Balay K., Parrot P., Hubert B. A norovirus oyster-related outbreak in a nursing home in France, January 2012. Epidemiol. Infect. 2015, 143(12):2486-2493.
23. Morillo S.G., Luchs A., Cilli A., do Carmo Sampaio Tavares Timenetsky M. Rapid detection of norovirus in naturally contaminated food: foodborne gastroenteritis outbreak on a cruise ship in Brazil, 2010. Food Environ. Virol. 2012, 4(3):124-129.
24. Neesanant P., Sirinarumitr T., Chantakru S., Boonyaprakob U., Chuwongkomon K., Bodhidatta L., Sethabutr O., Abente E.J., Supawat K., Mason C.J. Optimization of one-step real-time reverse transcription-polymerase chain reaction assays for norovirus detection and molecular epidemiology of noroviruses in Thailand. J. Virol. Methods 2013, 194(1-2):317-325.
25. Nielsen A.C., Gyhrs M.L., Nielsen L.P., Pedersen C., Bottiger B. Gastroenteritis and the novel picornaviruses aichi virus, cosavirus, saffold virus, and salivirus in young children. J. Clin. Virol. Off. Publ. Pan Am. Soc. Clin. Virol. 2013, 57(3):239-242.
26. Ogorzaly L., Bertrand I., Paris M., Maul A., Gantzer C. Occurrence, survival, and persistence of human adenoviruses and F-specific RNA phages in raw groundwater. Appl. Environ. Microbiol. 2010, 76(24):8019-8025.
27. Oka T., Katayama K., Hansman G.S., Kageyama T., Ogawa S., Wu F.T., White P.A., Takeda N. Detection of human sapovirus by real-time reverse transcription-polymerase chain reaction. J. Med. Virol. 2006, 78(10):1347-1353.
28. Prevost B., Lucas F.S., Goncalves A., Richard F., Moulin L., Wurtzer S. Large scale survey of enteric viruses in river and waste water underlines the health status of the local population. Environ. Int. 2015, 79:42-50.
29. Rodriguez R.A., Bounty S., Linden K.G. Long-range quantitative PCR for determining inactivation of adenovirus 2 by ultraviolet light. J. Appl. Microbiol. 2013, 114(6):1854-1865.
30. Seitz S.R., Leon J.S., Schwab K.J., Lyon G.M., Dowd M., McDaniels M., Abdulhafid G., Fernandez M.L., Lindesmith L.C., Baric R.S., Moe C.L. Norovirus infectivity in humans and persistence in water. Appl. Environ. Microbiol. 2011, 77(19):6884-6888.
31. W.H.O.G Manual for the Laboratory Diagnosis and Virological Surveillance of Influenza 2011.
32. Wurtzer S., Prevost B., Lucas F.S., Moulin L. Detection of enterovirus in environmental waters: a new optimized method compared to commercial real-time RT-qPCR kits. J. Virol. methods 2014, 209:47-54.
33. Ye X.Y., Ming X., Zhang Y.L., Xiao W.Q., Huang X.N., Cao Y.G., Gu K.D. Real-time PCR detection of enteric viruses in source water and treated drinking water in Wuhan, China. Curr. Microbiol. 2012, 65(3):244-253.
34. Zhou J., Wang X.C., Ji Z., Xu L., Yu Z. Source identification of bacterial and viral pathogens and their survival/fading in the process of wastewater treatment, reclamation, and environmental reuse. World J. Microbiol. Biotechnol. 2015, 31(1):109-120.