3CPET: Finding co-factor complexes from ChIA-PET data using a hierarchical Dirichlet process

Genome Biology

Volumn 16, Issue 1, 2015, Pages

  Djekidel, Mohamed Nadhir ^a   Liang, Zhengyu ^a   Wang, Qi ^a   Hu, Zhirui ^a   Li, Guipeng ^a   Chen, Yang ^a   Zhang, Michael Q ^a,b  

^a TSINGHUA UNIVERSITY   (China)

^b UNIVERSITY OF TEXAS AT DALLAS   (United States)

Author keywords

ChIA PET; Chromatin interactions; Co factors; Hierarchical Dirichlet proces

Indexed keywords

3CPET; ARTICLE; BAYESIAN LEARNING; BINDING SITE; CHROMATIN INTERACTION ANALYSIS BY PAIRED END TAG SEQUENCING; CHROMATIN STRUCTURE; HIERARCHICAL DIRICHLET PROCESS; NONPARAMETRIC TEST; PROCESS MODEL; PROTEIN PROTEIN INTERACTION; SEQUENCE ANALYSIS; SIMULATION; ALGORITHM; CHEMISTRY; CHROMATIN; HUMAN; MCF-7 CELL LINE; METABOLISM;

CHROMATIN; PROTEIN BINDING; TRANSCRIPTION FACTOR;

ALGORITHMS; CHROMATIN; HUMANS; MCF-7 CELLS; PROTEIN BINDING; TRANSCRIPTION FACTORS;

EID: 84951765264     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/s13059-015-0851-6     Document Type: Article

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