-
1
-
-
33846549173
-
A housekeeper with power of attorney: The rRNA genes in ribosome biogenesis
-
Moss, T., Langlois, F., Gagnon-Kugler, T. & Stefanovsky, V. A housekeeper with power of attorney: the rRNA genes in ribosome biogenesis. Cell Mol Life Sci. 64, 29-49 (2007).
-
(2007)
Cell Mol Life Sci.
, vol.64
, pp. 29-49
-
-
Moss, T.1
Langlois, F.2
Gagnon-Kugler, T.3
Stefanovsky, V.4
-
2
-
-
14744284578
-
C-myc binds to human ribosomal DNA and stimulates transcription of rRNA genes by RNA polymerase I
-
Grandori, C. et al. c-Myc binds to human ribosomal DNA and stimulates transcription of rRNA genes by RNA polymerase I. Nat Cell Biol. 7, 311-8 (2005).
-
(2005)
Nat Cell Biol.
, vol.7
, pp. 311-318
-
-
Grandori, C.1
-
3
-
-
55849109584
-
The epigenetics of rRNA genes: From molecular to chromosome biology
-
McStay, B. & Grummt, I. The epigenetics of rRNA genes: from molecular to chromosome biology. Annu Rev Cell Dev Biol. 24, 131-57, doi: 10.1146/annurev.cellbio.24.110707.175259 (2008).
-
(2008)
Annu Rev Cell Dev Biol.
, vol.24
, pp. 131-157
-
-
McStay, B.1
Grummt, I.2
-
4
-
-
0015422530
-
Location of ribosomal DNA in the human chromosome complement
-
Henderson, A. S., Warburton, D. & Atwood, K. C. Location of ribosomal DNA in the human chromosome complement. Proc Natl Acad Sci USA 69, 3394-8 (1972).
-
(1972)
Proc Natl Acad Sci USA
, vol.69
, pp. 3394-3398
-
-
Henderson, A.S.1
Warburton, D.2
Atwood, K.C.3
-
5
-
-
0037009366
-
The chromatin remodeling complex NoRC targets HDAC1 to the ribosomal gene promoter and represses RNA polymerase I transcription
-
Zhou, Y., Santoro, R. & Grummt, I. The chromatin remodeling complex NoRC targets HDAC1 to the ribosomal gene promoter and represses RNA polymerase I transcription. Embo J. 21, 4632-40 (2002).
-
(2002)
Embo J.
, vol.21
, pp. 4632-4640
-
-
Zhou, Y.1
Santoro, R.2
Grummt, I.3
-
6
-
-
0036844024
-
The nucleolar remodeling complex NoRC mediates heterochromatin formation and silencing of ribosomal gene transcription
-
Santoro, R., Li, J. & Grummt, I. The nucleolar remodeling complex NoRC mediates heterochromatin formation and silencing of ribosomal gene transcription. Nat Genet. 32, 393-6 (2002).
-
(2002)
Nat Genet.
, vol.32
, pp. 393-396
-
-
Santoro, R.1
Li, J.2
Grummt, I.3
-
7
-
-
15044362537
-
Epigenetic mechanism of rRNA gene silencing: Temporal order of NoRC-mediated histone modification, chromatin remodeling, and DNA methylation
-
Santoro, R. & Grummt, I. Epigenetic mechanism of rRNA gene silencing: temporal order of NoRC-mediated histone modification, chromatin remodeling, and DNA methylation. Mol Cell Biol. 25, 2539-46 (2005).
-
(2005)
Mol Cell Biol.
, vol.25
, pp. 2539-2546
-
-
Santoro, R.1
Grummt, I.2
-
8
-
-
48649106585
-
The structure of NoRC-associated RNA is crucial for targeting the chromatin remodelling complex NoRC to the nucleolus
-
Mayer, C., Neubert, M. & Grummt, I. The structure of NoRC-associated RNA is crucial for targeting the chromatin remodelling complex NoRC to the nucleolus. EMBO Rep. 9, 774-80, doi:10.1038/embor.2008.109 (2008).
-
(2008)
EMBO Rep.
, vol.9
, pp. 774-780
-
-
Mayer, C.1
Neubert, M.2
Grummt, I.3
-
9
-
-
78049261451
-
Wisely chosen paths-regulation of rRNA synthesis: Delivered on 30 June 2010 at the 35th FEBS congress in Gothenburg, Sweden
-
Grummt, I. Wisely chosen paths-regulation of rRNA synthesis: delivered on 30 June 2010 at the 35th FEBS Congress in Gothenburg, Sweden. Febs J. 277, 4626-39, doi: 10.1111/j.1742-4658.2010.07892.x (2010).
-
(2010)
Febs J.
, vol.277
, pp. 4626-4639
-
-
Grummt, I.1
-
10
-
-
34547774654
-
Different epigenetic layers engage in complex crosstalk to define the epigenetic state of mammalian rRNA genes
-
Grummt, I. Different epigenetic layers engage in complex crosstalk to define the epigenetic state of mammalian rRNA genes. Hum Mol Genet. 16 Spec No 1, R21-7 (2007).
-
(2007)
Hum Mol Genet.
, vol.16
, Issue.1
, pp. R21-R27
-
-
Grummt, I.1
-
11
-
-
33845707730
-
NoRC-dependent nucleosome positioning silences rRNA genes
-
Li, J., Langst, G. & Grummt, I. NoRC-dependent nucleosome positioning silences rRNA genes. Embo J. 25, 5735-41 (2006).
-
(2006)
Embo J.
, vol.25
, pp. 5735-5741
-
-
Li, J.1
Langst, G.2
Grummt, I.3
-
12
-
-
0842347401
-
Recruitment of the nucleolar remodeling complex NoRC establishes ribosomal DNA silencing in chromatin
-
Strohner, R. et al. Recruitment of the nucleolar remodeling complex NoRC establishes ribosomal DNA silencing in chromatin. Mol Cell Biol. 24, 1791-8 (2004).
-
(2004)
Mol Cell Biol.
, vol.24
, pp. 1791-1798
-
-
Strohner, R.1
-
13
-
-
34547743163
-
Activation of RNA polymerase I transcription by cockayne syndrome group B protein and histone methyltransferase G9a
-
Yuan, X., Feng, W., Imhof, A., Grummt, I. & Zhou, Y. Activation of RNA polymerase I transcription by cockayne syndrome group B protein and histone methyltransferase G9a. Mol Cell. 27, 585-95 (2007).
-
(2007)
Mol Cell
, vol.27
, pp. 585-595
-
-
Yuan, X.1
Feng, W.2
Imhof, A.3
Grummt, I.4
Zhou, Y.5
-
14
-
-
77954954525
-
The NoRC complex mediates the heterochromatin formation and stability of silent rRNA genes and centromeric repeats
-
Guetg, C. et al. The NoRC complex mediates the heterochromatin formation and stability of silent rRNA genes and centromeric repeats. Embo J. 29, 2135-46, doi: 10.1038/emboj.2010.17 (2010).
-
(2010)
Embo J.
, vol.29
, pp. 2135-2146
-
-
Guetg, C.1
-
15
-
-
3242885608
-
The chromatin remodeling complex NoRC and TTF-I cooperate in the regulation of the mammalian rRNA genes in vivo
-
Nemeth, A., Strohner, R., Grummt, I. & Langst, G. The chromatin remodeling complex NoRC and TTF-I cooperate in the regulation of the mammalian rRNA genes in vivo. Nucleic Acids Res. 32, 4091-9 (2004).
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 4091-4099
-
-
Nemeth, A.1
Strohner, R.2
Grummt, I.3
Langst, G.4
-
16
-
-
0034791175
-
Molecular mechanisms mediating methylation-dependent silencing of ribosomal gene transcription
-
Santoro, R. & Grummt, I. Molecular mechanisms mediating methylation-dependent silencing of ribosomal gene transcription. Mol Cell. 8, 719-25 (2001).
-
(2001)
Mol Cell
, vol.8
, pp. 719-725
-
-
Santoro, R.1
Grummt, I.2
-
17
-
-
59449110517
-
UBF levels determine the number of active ribosomal RNA genes in mammals
-
Sanij, E. et al. UBF levels determine the number of active ribosomal RNA genes in mammals. J Cell Biol. 183, 1259-74, doi: 10.1083/jcb.200805146 (2008).
-
(2008)
J Cell Biol.
, vol.183
, pp. 1259-1274
-
-
Sanij, E.1
-
18
-
-
73449096759
-
The role of UBF in regulating the structure and dynamics of transcriptionally active rDNA chromatin
-
Sanij, E. & Hannan, R. D. The role of UBF in regulating the structure and dynamics of transcriptionally active rDNA chromatin. Epigenetics. 4, 374-82 (2009).
-
(2009)
Epigenetics
, vol.4
, pp. 374-382
-
-
Sanij, E.1
Hannan, R.D.2
-
19
-
-
0024392359
-
Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle
-
Conconi, A., Widmer, R. M., Koller, T. & Sogo, J. M. Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle. Cell. 57, 753-61 (1989).
-
(1989)
Cell
, vol.57
, pp. 753-761
-
-
Conconi, A.1
Widmer, R.M.2
Koller, T.3
Sogo, J.M.4
-
20
-
-
67549119096
-
CTCF: Master weaver of the genome
-
Phillips, J. E. & Corces, V. G. CTCF: master weaver of the genome. Cell. 137, 1194-211, doi: 10.1016/j.cell.2009.06.001 (2009).
-
(2009)
Cell
, vol.137
, pp. 1194-1211
-
-
Phillips, J.E.1
Corces, V.G.2
-
21
-
-
33744506421
-
Targeting of CTCF to the nucleolus inhibits nucleolar transcription through a poly(ADP-ribosyl)ation-dependent mechanism
-
Torrano, V. et al. Targeting of CTCF to the nucleolus inhibits nucleolar transcription through a poly(ADP-ribosyl)ation-dependent mechanism. J Cell Sci. 119, 1746-59 (2006).
-
(2006)
J Cell Sci.
, vol.119
, pp. 1746-1759
-
-
Torrano, V.1
-
22
-
-
70349312354
-
ChIP-seq: Advantages and challenges of a maturing technology
-
Park, P. J. ChIP-seq: advantages and challenges of a maturing technology. Nat Rev Genet. 10, 669-80, doi: 10.1038/nrg2641 (2009).
-
(2009)
Nat Rev Genet.
, vol.10
, pp. 669-680
-
-
Park, P.J.1
-
23
-
-
79960202884
-
Integrative genomic analysis of human ribosomal DNA
-
Zentner, G. E., Saiakhova, A., Manaenkov, P., Adams, M. D. & Scacheri, P. C. Integrative genomic analysis of human ribosomal DNA. Nucleic Acids Res. 39, 4949-60, doi: 10.1093/nar/gkq1326 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 4949-4960
-
-
Zentner, G.E.1
Saiakhova, A.2
Manaenkov, P.3
Adams, M.D.4
Scacheri, P.C.5
-
24
-
-
0027270476
-
Chromatin structures and transcription of rDNA in yeast saccharomyces cerevisiae
-
Dammann, R., Lucchini, R., Koller, T. & Sogo, J. M. Chromatin structures and transcription of rDNA in yeast Saccharomyces cerevisiae. Nucleic Acids Res. 21, 2331-8 (1993).
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 2331-2338
-
-
Dammann, R.1
Lucchini, R.2
Koller, T.3
Sogo, J.M.4
-
25
-
-
0021724904
-
Psoralen-crosslinking of DNA as a probe for the structure of active nucleolar chromatin
-
Sogo, J. M., Ness, P. J., Widmer, R. M., Parish, R. W. & Koller, T. Psoralen-crosslinking of DNA as a probe for the structure of active nucleolar chromatin. J Mol Biol. 178, 897-919 (1984).
-
(1984)
J Mol Biol.
, vol.178
, pp. 897-919
-
-
Sogo, J.M.1
Ness, P.J.2
Widmer, R.M.3
Parish, R.W.4
Koller, T.5
-
26
-
-
0023660883
-
Structure of the extrachromosomal ribosomal RNA chromatin of physarum polycephalum
-
Lucchini, R., Pauli, U., Braun, R., Koller, T. & Sogo, J. M. Structure of the extrachromosomal ribosomal RNA chromatin of Physarum polycephalum. J Mol Biol. 196, 829-43 (1987).
-
(1987)
J Mol Biol.
, vol.196
, pp. 829-843
-
-
Lucchini, R.1
Pauli, U.2
Braun, R.3
Koller, T.4
Sogo, J.M.5
-
27
-
-
0035801407
-
NoRC-A novel member of mammalian ISWI-containing chromatin remodeling machines
-
Strohner, R. et al. NoRC-a novel member of mammalian ISWI-containing chromatin remodeling machines. Embo J. 20, 4892-900 (2001).
-
(2001)
Embo J.
, vol.20
, pp. 4892-4900
-
-
Strohner, R.1
-
28
-
-
33644869971
-
The chromatin remodelling complex WSTF-SNF2h interacts with nuclear myosin 1 and has a role in RNA polymerase I transcription
-
Percipalle, P. et al. The chromatin remodelling complex WSTF-SNF2h interacts with nuclear myosin 1 and has a role in RNA polymerase I transcription. EMBO Rep. 7, 525-30 (2006).
-
(2006)
EMBO Rep.
, vol.7
, pp. 525-530
-
-
Percipalle, P.1
-
29
-
-
84868104218
-
Interaction of nucleolin with ribosomal RNA genes and its role in RNA polymerase I transcription
-
Cong, R. et al. Interaction of nucleolin with ribosomal RNA genes and its role in RNA polymerase I transcription. Nucleic Acids Res. 40, 9441-54, doi: 10.1093/nar/gks720 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 9441-9454
-
-
Cong, R.1
-
30
-
-
84891770045
-
MacroH2A1 histone variant represses rDNA transcription
-
Cong, R. et al. macroH2A1 histone variant represses rDNA transcription. Nucleic Acids Res. 42, 181-92, doi: 10.1093/nar/gkt863 (2014).
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 181-192
-
-
Cong, R.1
-
31
-
-
78049456151
-
CTCF regulates the local epigenetic state of ribosomal DNA repeats
-
van de Nobelen, S. et al. CTCF regulates the local epigenetic state of ribosomal DNA repeats. Epigenetics Chromatin. 3, 19, doi: 10.1186/1756-8935-3-19 (2010).
-
(2010)
Epigenetics Chromatin
, vol.3
, pp. 19
-
-
Van De-Nobelen, S.1
-
32
-
-
20844440353
-
MAD1 and c-MYC regulate UBF and rDNA transcription during granulocyte differentiation
-
Poortinga, G. et al. MAD1 and c-MYC regulate UBF and rDNA transcription during granulocyte differentiation. Embo J. 23, 3325-35 (2004).
-
(2004)
Embo J.
, vol.23
, pp. 3325-3335
-
-
Poortinga, G.1
-
33
-
-
0842285679
-
Identification of the molecular requirements for an RAR alpha-mediated cell cycle arrest during granulocytic differentiation
-
Walkley, C. R. et al. Identification of the molecular requirements for an RAR alpha-mediated cell cycle arrest during granulocytic differentiation. Blood. 103, 1286-95 (2004).
-
(2004)
Blood
, vol.103
, pp. 1286-1295
-
-
Walkley, C.R.1
-
34
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead, B., Trapnell, C., Pop, M. & Salzberg, S. L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10, R25, doi:10.1186/gb-2009-10-3-r25 (2009).
-
(2009)
Genome Biol.
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
35
-
-
54949147307
-
F-seq: A feature density estimator for high-throughput sequence tags
-
Boyle, A. P., Guinney, J., Crawford, G. E. & Furey, T. S. F-Seq: a feature density estimator for high-throughput sequence tags. Bioinformatics. 24, 2537-8, doi: 10.1093/bioinformatics/btn480 (2008).
-
(2008)
Bioinformatics
, vol.24
, pp. 2537-2538
-
-
Boyle, A.P.1
Guinney, J.2
Crawford, G.E.3
Furey, T.S.4
-
37
-
-
55749094855
-
An integrated software system for analyzing ChIP-chip and ChIP-seq data
-
Ji, H. et al. An integrated software system for analyzing ChIP-chip and ChIP-seq data. Nat Biotechnol 26, 1293-300, doi: 10.1038/nbt.1505 (2008).
-
(2008)
Nat Biotechnol
, vol.26
, pp. 1293-1300
-
-
Ji, H.1
|