-
1
-
-
0021169826
-
Gemmata obscuriglobus, a new genus and species of the budding bacteria
-
Franzmann PD, Skerman VBD. Gemmata obscuriglobus, a new genus and species of the budding bacteria. Antonie Van Leeuwenhoek. 1984;50:261-8.
-
(1984)
Antonie Van Leeuwenhoek
, vol.50
, pp. 261-268
-
-
Franzmann, P.D.1
Skerman, V.B.D.2
-
3
-
-
0036135994
-
Isolation of Gemmata-like and Isosphaera-like planctomycete bacteria from soil and freshwater
-
Wang J, Jenkins C, Webb RI, Fuerst JA. Isolation of Gemmata-like and Isosphaera-like planctomycete bacteria from soil and freshwater. Appl Environ Microbiol. 2002;68:417-22.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 417-422
-
-
Wang, J.1
Jenkins, C.2
Webb, R.I.3
Fuerst, J.A.4
-
4
-
-
33747162190
-
Detection of representatives of the Planctomycetes in Sphagnum peat bogs by molecular and cultivation approaches
-
Kulichevskaya IS, Pankratov TA, Dedysh SN. Detection of representatives of the Planctomycetes in Sphagnum peat bogs by molecular and cultivation approaches. Mikrobiologiia. 2006;75:329-35.
-
(2006)
Mikrobiologiia
, vol.75
, pp. 329-335
-
-
Kulichevskaya, I.S.1
Pankratov, T.A.2
Dedysh, S.N.3
-
5
-
-
2142800594
-
Molecular evidence for novel planctomycete diversity in a municipal wastewater treatment plant
-
Chouari R, Le Paslier D, Daegelen P, Ginestet P, Weissenbach J, Sghir A. Molecular evidence for novel planctomycete diversity in a municipal wastewater treatment plant. Appl Environ Microbiol. 2003;69:7354-63.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 7354-7363
-
-
Chouari, R.1
Le Paslier, D.2
Daegelen, P.3
Ginestet, P.4
Weissenbach, J.5
Sghir, A.6
-
6
-
-
4644240977
-
Diversity and seasonal changes of uncultured Planctomycetales in river biofilms
-
Brümmer IHM, Felske ADM, Wagner-Döbler I. Diversity and seasonal changes of uncultured Planctomycetales in river biofilms. Appl Environ Microbiol. 2004;70:5094-101.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 5094-5101
-
-
Brümmer, I.H.M.1
Felske, A.D.M.2
Wagner-Döbler, I.3
-
7
-
-
33746077722
-
Diversity of Planctomycetes in soil in relation to soil history and environmental heterogeneity
-
Buckley DH, Huangyutitham V, Nelson TA, Rumberger A, Thies JE. Diversity of Planctomycetes in soil in relation to soil history and environmental heterogeneity. Appl Environ Microbiol. 2006;72:4522-31.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 4522-4531
-
-
Buckley, D.H.1
Huangyutitham, V.2
Nelson, T.A.3
Rumberger, A.4
Thies, J.E.5
-
8
-
-
34547840257
-
Molecular bacterial community analysis of clean rooms where spacecraft are assembled
-
Moissl C, Osman S, La Duc MT, Dekas A, Brodie E, DeSantis T, et al. Molecular bacterial community analysis of clean rooms where spacecraft are assembled. FEMS Microbiol Ecol. 2007;61:509-21.
-
(2007)
FEMS Microbiol Ecol
, vol.61
, pp. 509-521
-
-
Moissl, C.1
Osman, S.2
La Duc, M.T.3
Dekas, A.4
Brodie, E.5
DeSantis, T.6
-
9
-
-
45249094766
-
Different Planctomycetes diversity patterns in latitudinal surface seawater of the open sea and in sediment
-
Shu Q, Jiao N. Different Planctomycetes diversity patterns in latitudinal surface seawater of the open sea and in sediment. J Microbiol. 2008;46:154-9.
-
(2008)
J Microbiol
, vol.46
, pp. 154-159
-
-
Shu, Q.1
Jiao, N.2
-
10
-
-
83355173191
-
Metagenomic analysis of bacterial diversity of Siloam hot water spring, Limpopo
-
Tekere M, Lotter A, Olivier J, Jonker N, Venter SN. Metagenomic analysis of bacterial diversity of Siloam hot water spring, Limpopo. South Africa J Biotechnol. 2011;10:18005-12.
-
(2011)
South Africa J Biotechnol
, vol.10
, pp. 18005-18012
-
-
Tekere, M.1
Lotter, A.2
Olivier, J.3
Jonker, N.4
Venter, S.N.5
-
11
-
-
84874061382
-
Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.)
-
Van Kessel MA, Dutilh BE, Neveling K, Kwint MP, Veltman JA, Flik G, et al. Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.). AMB Express. 2011;1:1-9.
-
(2011)
AMB Express
, vol.1
, pp. 1-9
-
-
Van Kessel, M.A.1
Dutilh, B.E.2
Neveling, K.3
Kwint, M.P.4
Veltman, J.A.5
Flik, G.6
-
12
-
-
79952339121
-
Microbial diversity in nonsulfur, sulfur and iron geothermal steam vents
-
Benson CA, Bizzoco RW, Lipson DA, Kelley ST. Microbial diversity in nonsulfur, sulfur and iron geothermal steam vents. FEMS Microbiol Ecol. 2011;76:74-88.
-
(2011)
FEMS Microbiol Ecol
, vol.76
, pp. 74-88
-
-
Benson, C.A.1
Bizzoco, R.W.2
Lipson, D.A.3
Kelley, S.T.4
-
13
-
-
84886254937
-
Molecular diversity of the Planctomycetes in the human gut microbiota in France and Senegal
-
Cayrou C, Sambe B, Armougom F, Raoult D, Drancourt M. Molecular diversity of the Planctomycetes in the human gut microbiota in France and Senegal. APMIS. 2013;121:1082-90.
-
(2013)
APMIS
, vol.121
, pp. 1082-1090
-
-
Cayrou, C.1
Sambe, B.2
Armougom, F.3
Raoult, D.4
Drancourt, M.5
-
14
-
-
79956136196
-
Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function
-
Fuerst J, Sagulenko E. Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function. Nat Rev Microbiol. 2011;9:403-13.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 403-413
-
-
Fuerst, J.1
Sagulenko, E.2
-
15
-
-
84878297375
-
Three-Dimensional Reconstruction of Bacteria with a complex endomembrane system
-
Santarella-Mellwig R, Pruggnaller S, Roos N, Mattaj IW, Devos DP. Three-Dimensional Reconstruction of Bacteria with a complex endomembrane system. PLoS Biol. 2013;11, e1001565.
-
(2013)
PLoS Biol
, vol.11
-
-
Santarella-Mellwig, R.1
Pruggnaller, S.2
Roos, N.3
Mattaj, I.W.4
Devos, D.P.5
-
16
-
-
62649088069
-
Chromatin Organization and Radio Resistance in the Bacterium Gemmata obscuriglobus
-
Lieber A, Leis A, Kushmaro A, Minsky A, Medalia O. Chromatin Organization and Radio Resistance in the Bacterium Gemmata obscuriglobus. J Bacteriol. 2009;191:1439-45.
-
(2009)
J Bacteriol
, vol.191
, pp. 1439-1445
-
-
Lieber, A.1
Leis, A.2
Kushmaro, A.3
Minsky, A.4
Medalia, O.5
-
17
-
-
77954743125
-
Endocytosis-like protein uptake in the bacterium Gemmata obscuriglobus
-
Lonhienne TG, Sagulenko E, Webb RI, Lee KC, Franke J, Devos DP, et al. Endocytosis-like protein uptake in the bacterium Gemmata obscuriglobus. Proc Natl Acad Sci. 2010;107:12883-8.
-
(2010)
Proc Natl Acad Sci
, vol.107
, pp. 12883-12888
-
-
Lonhienne, T.G.1
Sagulenko, E.2
Webb, R.I.3
Lee, K.C.4
Franke, J.5
Devos, D.P.6
-
18
-
-
84989174889
-
From genome mining to phenotypic microarrays: Planctomycetes as source for novel bioactive molecules
-
Jeske O, Jogler M, Petersen J, Sikorski J, Jogler C. From genome mining to phenotypic microarrays: Planctomycetes as source for novel bioactive molecules. Antonie Van Leeuwenhoek. 2013;1-17.
-
(2013)
Antonie Van Leeuwenhoek
, pp. 1-17
-
-
Jeske, O.1
Jogler, M.2
Petersen, J.3
Sikorski, J.4
Jogler, C.5
-
19
-
-
0036048733
-
Gene discovery within the planctomycete division of the domain Bacteria using sequence tags from genomic DNA libraries
-
Jenkins C, Kedar V, Fuerst JA. Gene discovery within the planctomycete division of the domain Bacteria using sequence tags from genomic DNA libraries. Genome Biol. 2002;3:1-11.
-
(2002)
Genome Biol
, vol.3
, pp. 1-11
-
-
Jenkins, C.1
Kedar, V.2
Fuerst, J.A.3
-
20
-
-
84875887336
-
Bringing Planctomycetes into pure culture
-
Lage OM, Bondoso J. Bringing Planctomycetes into pure culture. Front Microbiol. 2012;3:405.
-
(2012)
Front Microbiol
, vol.3
, pp. 405
-
-
Lage, O.M.1
Bondoso, J.2
-
21
-
-
77957237160
-
Broad-spectrum antibiotic resistance of Planctomycetes organisms determined by Etest
-
Cayrou C, Raoult D, Drancourt M. Broad-spectrum antibiotic resistance of Planctomycetes organisms determined by Etest. J Antimicrob Chemother. 2010;65:2119-22.
-
(2010)
J Antimicrob Chemother
, vol.65
, pp. 2119-2122
-
-
Cayrou, C.1
Raoult, D.2
Drancourt, M.3
-
22
-
-
84878247256
-
Genotyping of Rhodopirellula baltica organisms using multispacer sequence typing
-
Cayrou C, Terra A, Drancourt M. Genotyping of Rhodopirellula baltica organisms using multispacer sequence typing. Mar Ecol. 2013;34:251-4.
-
(2013)
Mar Ecol
, vol.34
, pp. 251-254
-
-
Cayrou, C.1
Terra, A.2
Drancourt, M.3
-
23
-
-
78649709234
-
Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of environmental organisms: the Planctomycetes paradigm
-
Cayrou C, Raoult D, Drancourt M. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of environmental organisms: the Planctomycetes paradigm. Environ Microbiol Rep. 2010;2:752-60.
-
(2010)
Environ Microbiol Rep
, vol.2
, pp. 752-760
-
-
Cayrou, C.1
Raoult, D.2
Drancourt, M.3
-
24
-
-
84890615066
-
Non-contiguous finished genome sequence and description of Oceanobacillus massiliensis sp. nov
-
Roux V, Million M, Robert C, Magne A, Raoult D. Non-contiguous finished genome sequence and description of Oceanobacillus massiliensis sp. nov. Stand Genomic Sci. 2013;9:370.
-
(2013)
Stand Genomic Sci
, vol.9
, pp. 370
-
-
Roux, V.1
Million, M.2
Robert, C.3
Magne, A.4
Raoult, D.5
-
25
-
-
84884741950
-
Molecular studies neglect apparently gram-negative populations in the human gut microbiota
-
Hugon P, Lagier JC, Robert C, Lepolard C, Papazian L, Musso D, et al. Molecular studies neglect apparently gram-negative populations in the human gut microbiota. J Clin Microbiol. 2013;51:3286-93.
-
(2013)
J Clin Microbiol
, vol.51
, pp. 3286-3293
-
-
Hugon, P.1
Lagier, J.C.2
Robert, C.3
Lepolard, C.4
Papazian, L.5
Musso, D.6
-
26
-
-
33947302827
-
Taxonomic parameters revisited: tarnished gold standards
-
Stackebrandt E, Ebers J. Taxonomic parameters revisited: tarnished gold standards. Microbiol Today. 2006;33:152-5.
-
(2006)
Microbiol Today
, vol.33
, pp. 152-155
-
-
Stackebrandt, E.1
Ebers, J.2
-
27
-
-
43449108562
-
The minimum information about a genome sequence (MIGS) specification
-
Field D, Garrity G, Gray T, Morrison N, Selengut J, Sterk P, et al. The minimum information about a genome sequence (MIGS) specification. Nat Biotechnol. 2008;26:541-7.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 541-547
-
-
Field, D.1
Garrity, G.2
Gray, T.3
Morrison, N.4
Selengut, J.5
Sterk, P.6
-
28
-
-
79959979274
-
PHAST: a fast phage search tool
-
Zhou Y, Liang Y, Lynch KH, Dennis JJ, Wishart DS. PHAST: a fast phage search tool. Nucleic Acids Res. 2011;39:W347-52. doi:10.1093/nar/gkr485.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. W347-W352
-
-
Zhou, Y.1
Liang, Y.2
Lynch, K.H.3
Dennis, J.J.4
Wishart, D.S.5
-
29
-
-
84883353135
-
AntiSMASH 2.0 a versatile platform for genome mining of secondary metabolite producers
-
Blin K, Medema MH, Kazempour D, Fischbach MA, Breitling R, Takano E, et al. AntiSMASH 2.0 a versatile platform for genome mining of secondary metabolite producers. Nucleic Acids Res. 2013;41:W204-12. doi:10.1093/nar/gkt449.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. W204-W212
-
-
Blin, K.1
Medema, M.H.2
Kazempour, D.3
Fischbach, M.A.4
Breitling, R.5
Takano, E.6
-
30
-
-
84867587461
-
Identification of acquired antimicrobial resistance genes
-
Zankari E, Hasman H, Cosentino S, Vestergaard M, Rasmussen S, Lund O, et al. Identification of acquired antimicrobial resistance genes. J Antimicrob Chemother. 2012;67:2640-4.
-
(2012)
J Antimicrob Chemother
, vol.67
, pp. 2640-2644
-
-
Zankari, E.1
Hasman, H.2
Cosentino, S.3
Vestergaard, M.4
Rasmussen, S.5
Lund, O.6
-
31
-
-
34547579396
-
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
-
Grissa I, Vergnaud G, Pourcel C. CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats. Nucleic Acids Res. 2007;35:W52-7.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. W52-W57
-
-
Grissa, I.1
Vergnaud, G.2
Pourcel, C.3
-
32
-
-
77952891045
-
Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs
-
Auch AF, Klenk HP, Göker M. Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs. Stand Genomic Sci. 2010;2:142-8. doi:10.4056/sigs.541628.
-
(2010)
Stand Genomic Sci
, vol.2
, pp. 142-148
-
-
Auch, A.F.1
Klenk, H.P.2
Göker, M.3
-
33
-
-
84871043181
-
Identification of proteins likely to be involved in morphogenesis, cell division, and signal transduction in planctomycetes by comparative genomics
-
Jogler C, Waldmann J, Huang X, Jogler M, Glöckner FO, Mascher T, et al. Identification of proteins likely to be involved in morphogenesis, cell division, and signal transduction in planctomycetes by comparative genomics. J Bacteriol. 2012;194:6419-30.
-
(2012)
J Bacteriol
, vol.194
, pp. 6419-6430
-
-
Jogler, C.1
Waldmann, J.2
Huang, X.3
Jogler, M.4
Glöckner, F.O.5
Mascher, T.6
-
34
-
-
77951957095
-
Two new families of the FtsZ-tubulin protein superfamily implicated in membrane remodeling in diverse bacteria and archaea
-
Makarova KS, Koonin EV. Two new families of the FtsZ-tubulin protein superfamily implicated in membrane remodeling in diverse bacteria and archaea. Biol Direct. 2010;5:33.
-
(2010)
Biol Direct
, vol.5
, pp. 33
-
-
Makarova, K.S.1
Koonin, E.V.2
-
35
-
-
84871177496
-
Peptidoglycan: a post-genomic analysis
-
Cayrou C, Henrissat B, Gouret P, Pontarotti P, Drancourt M. Peptidoglycan: a post-genomic analysis. BMC Microbiol. 2012;12:294.
-
(2012)
BMC Microbiol
, vol.12
, pp. 294
-
-
Cayrou, C.1
Henrissat, B.2
Gouret, P.3
Pontarotti, P.4
Drancourt, M.5
-
36
-
-
8844266097
-
The 1.2-megabase genome sequence of Mimivirus
-
Raoult D, Audic S, Robert C, Abergel C, Renesto P, Ogata H, et al. The 1.2-megabase genome sequence of Mimivirus. Science. 2004;306:1344-50.
-
(2004)
Science
, vol.306
, pp. 1344-1350
-
-
Raoult, D.1
Audic, S.2
Robert, C.3
Abergel, C.4
Renesto, P.5
Ogata, H.6
-
37
-
-
0021139615
-
Cell wall studies on budding bacteria of the Planctomyces/Pasteuria group and on a Prosthecomicrobium sp
-
König E, Schlesner H, Hirsch P. Cell wall studies on budding bacteria of the Planctomyces/Pasteuria group and on a Prosthecomicrobium sp. Arch Microbiol. 1984;138:200-5.
-
(1984)
Arch Microbiol
, vol.138
, pp. 200-205
-
-
König, E.1
Schlesner, H.2
Hirsch, P.3
-
38
-
-
34548415876
-
Genome analysis of Minibacterium massiliensis highlights the convergent evolution of water-living bacteria
-
Audic S, Robert C, Campagna B, Parinelle H, Claverie JM, Raoult D, et al. Genome analysis of Minibacterium massiliensis highlights the convergent evolution of water-living bacteria. PLoS Genet. 2007;3, e138.
-
(2007)
PLoS Genet
, vol.3
-
-
Audic, S.1
Robert, C.2
Campagna, B.3
Parinelle, H.4
Claverie, J.M.5
Raoult, D.6
-
39
-
-
36448991500
-
ClustalW and ClustalX version 2
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, et al. ClustalW and ClustalX version 2. Bioinformatics. 2007;23:2947-8.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
-
40
-
-
79957613599
-
MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Mol Biol Evol. 2011;28:2731-9.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
41
-
-
0025300402
-
Towards a natural system of organisms: proposal for the domains Archae, Bacteria, and Eukarya
-
Woese CR, Kandler O, Wheelis ML. Towards a natural system of organisms: proposal for the domains Archae, Bacteria, and Eukarya. Proc Natl Acad Sci U S A. 1990;87:4576-9.
-
(1990)
Proc Natl Acad Sci U S A
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
44
-
-
0001748999
-
Assignment of the genera Planctomyces and Pirella to a new family Planctomycetaceae fam. nov. and description of the order Planctomycetales ord. nov
-
Schlesner H, Stackebrandt E. Assignment of the genera Planctomyces and Pirella to a new family Planctomycetaceae fam. nov. and description of the order Planctomycetales ord. nov. Syst Appl Microbiol. 1986;8:174-6.
-
(1986)
Syst Appl Microbiol
, vol.8
, pp. 174-176
-
-
Schlesner, H.1
Stackebrandt, E.2
-
45
-
-
0034069495
-
Gene ontology: tool for the unification of biology. The gene ontology consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, et al. Gene ontology: tool for the unification of biology. The gene ontology consortium. Nat Genet. 2000;25:25-9.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
|