메뉴 건너뛰기




Volumn 10, Issue 78, 2011, Pages 18005-18012

Metagenomic analysis of bacterial diversity of Siloam hot water spring, Limpopo, South Africa

Author keywords

454 sequencing; Biodiversity; Hot springs; South Africa; Thermophilic

Indexed keywords

BROMIDE; FLUORIDE; HOT WATER; RNA 16S;

EID: 83355173191     PISSN: 16845315     EISSN: None     Source Type: Journal    
DOI: 10.5897/AJB11.89     Document Type: Article
Times cited : (56)

References (25)
  • 1
    • 80054894369 scopus 로고    scopus 로고
    • Characterization and 16S rDNA identification of thermo-tolerant bacteria isolated from hot springs
    • Abou-Shanab RAI (2007). Characterization and 16S rDNA identification of thermo-tolerant bacteria isolated from hot springs. J. Appl. Sci. Res. 3: 994-1000.
    • (2007) J. Appl. Sci. Res , vol.3 , pp. 994-1000
    • Abou-Shanab, R.A.I.1
  • 2
    • 55449131166 scopus 로고    scopus 로고
    • Bioinformatics for whole-genome shortgun sequencing of microbial communities
    • Chen K, Patcher L (2005). Bioinformatics for whole-genome shortgun sequencing of microbial communities. PLoS Comput. Biol. 1: 24.
    • (2005) PLoS Comput. Biol , vol.1 , pp. 24
    • Chen, K.1    Patcher, L.2
  • 3
    • 0036740530 scopus 로고    scopus 로고
    • Meiothermus taiwanensis sp. nov., a novel filamentous, thermophilic species isolated in Taiwan
    • Chen MY, Lin GH, Lin YT, Tsay SS (2002). Meiothermus taiwanensis sp. nov., a novel filamentous, thermophilic species isolated in Taiwan. Int. J. Syst. Evol. Microbiol. 52(5): 1647-1654.
    • (2002) Int. J. Syst. Evol. Microbiol , vol.52 , Issue.5 , pp. 1647-1654
    • Chen, M.Y.1    Lin, G.H.2    Lin, Y.T.3    Tsay, S.S.4
  • 4
    • 0032902329 scopus 로고    scopus 로고
    • Classification of alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. Nov
    • Coenye T, Falsent E, Vancanneyt M, Hoste B, Govan JRW, Kersters K, Vandamme P (1999). Classification of alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. Nov., Int. J. Syst. Bacteriol. 49: 405-413.
    • (1999) Int. J. Syst. Bacteriol , vol.49 , pp. 405-413
    • Coenye, T.1    Falsent, E.2    Vancanneyt, M.3    Hoste, B.4    Govan, J.R.W.5    Kersters, K.6    Vandamme, P.7
  • 5
    • 34248159346 scopus 로고    scopus 로고
    • High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment
    • DeSantis TZ, Brodie EL, Moberg JP, Zubietta IX, Piceno YM, Andersen GL (2007). High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment. Microbiol. Ecol. 53: 371-383.
    • (2007) Microbiol. Ecol , vol.53 , pp. 371-383
    • Desantis, T.Z.1    Brodie, E.L.2    Moberg, J.P.3    Zubietta, I.X.4    Piceno, Y.M.5    Andersen, G.L.6
  • 6
    • 53749097505 scopus 로고    scopus 로고
    • Polymicrobial nature of chronic diabetic foot ulcer biofilm infections determined using bacterial tag encoded FLX amplicon pyrosequencing (bTEFAP)
    • doi:10.1371/journal.pone.0003326
    • Dowd SE, Wolcott RD, Sun Y, McKeehan T, Smith E, Rhoads D (2008) Polymicrobial nature of chronic diabetic foot ulcer biofilm infections determined using bacterial tag encoded FLX amplicon pyrosequencing (bTEFAP). PLoS ONE, 3: p. 3326. doi:10.1371/journal.pone.0003326.
    • (2008) PLoS ONE , vol.3 , pp. 3326
    • Dowd, S.E.1    Wolcott, R.D.2    Sun, Y.3    McKeehan, T.4    Smith, E.5    Rhoads, D.6
  • 8
    • 58149204132 scopus 로고    scopus 로고
    • Bacterial community composition in thermophilic microbial mats from five hot springs in central Tibet
    • Lau MCY, Aitchison JC, Pointing SB (2009). Bacterial community composition in thermophilic microbial mats from five hot springs in central Tibet. Extremophiles, 13: 39-149.
    • (2009) Extremophiles , vol.13 , pp. 39-149
    • Lau, M.C.Y.1    Aitchison, J.C.2    Pointing, S.B.3
  • 9
    • 54549106898 scopus 로고    scopus 로고
    • Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
    • Liu Z, DeSantis TZ, Andersen GL, Knight R (2008). Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers. Nucleic Acids Res. 36: 120.
    • (2008) Nucleic Acids Res , vol.36 , pp. 120
    • Liu, Z.1    Desantis, T.Z.2    Andersen, G.L.3    Knight, R.4
  • 10
    • 0001660253 scopus 로고
    • Thermal waters of the Union of South Africa and South West Africa
    • Kent LE (1949). Thermal waters of the Union of South Africa and South West Africa. Trans. Geol. Soc. W. Afr. 52: 231-264.
    • (1949) Trans. Geol. Soc. W. Afr , vol.52 , pp. 231-264
    • Kent, L.E.1
  • 13
    • 33644829921 scopus 로고    scopus 로고
    • Archeal and bacterial communities in geochemically diverse hotsprings of Yellowstone National Park, USA
    • Meyer-Dombard DR, Shock EL, Amend JP (2005). Archeal and bacterial communities in geochemically diverse hotsprings of Yellowstone National Park, USA. Geobiology, 3: 211-227.
    • (2005) Geobiology , vol.3 , pp. 211-227
    • Meyer-Dombard, D.R.1    Shock, E.L.2    Amend, J.P.3
  • 14
    • 70349917781 scopus 로고    scopus 로고
    • Isolation and characterisation of aerobic thermophilic bacteria from the Savusavu Hot spring in Fiji
    • Narayan VV, Hatha MA, Morgan HW, Rao D (2008). Isolation and characterisation of aerobic thermophilic bacteria from the Savusavu Hot spring in Fiji. Microbes Environ. 23: 350-352.
    • (2008) Microbes Environ , vol.23 , pp. 350-352
    • Narayan, V.V.1    Hatha, M.A.2    Morgan, H.W.3    Rao, D.4
  • 20
    • 27944471010 scopus 로고    scopus 로고
    • Extremophilic microbes: Diversity and perspectives
    • Satyanarayana T, Raghukumar C, Shivaji S (2005). Extremophilic microbes: diversity and perspectives. Curr. Sci. 89: 78-90.
    • (2005) Curr. Sci , vol.89 , pp. 78-90
    • Satyanarayana, T.1    Raghukumar, C.2    Shivaji, S.3
  • 21
    • 23944495106 scopus 로고    scopus 로고
    • Metagenomics for studying unculturable microorganisms: Cutting the Gordian Knot
    • Schloss P, Handelsman J (2005). Metagenomics for studying unculturable microorganisms: cutting the Gordian Knot. Genome Biol. 6: 229.
    • (2005) Genome Biol , vol.6 , pp. 229
    • Schloss, P.1    Handelsman, J.2
  • 25
    • 0042242559 scopus 로고    scopus 로고
    • Geographic Barriers Isolate endemic populations of hyperthermophilic archaea
    • DOI: 10.1126/science.1086909
    • Whitaker RJ, Grogan DW, Taylor, JW (2003). Geographic Barriers Isolate endemic populations of hyperthermophilic archaea. Science: 301: p. 976 DOI: 10.1126/science.1086909.
    • (2003) Science , vol.301 , pp. 976
    • Whitaker, R.J.1    Grogan, D.W.2    Taylor, J.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.