메뉴 건너뛰기




Volumn 11, Issue 11, 2015, Pages

Metabolomic Quantitative Trait Loci (mQTL) Mapping Implicates the Ubiquitin Proteasome System in Cardiovascular Disease Pathogenesis

Author keywords

[No Author keywords available]

Indexed keywords

ACYLCARNITINE; FATTY ACID; GLUCOSE REGULATED PROTEIN 78; PROTEASOME; SHORT CHAIN DICARBOXYLACYLCARNITINE; STROMAL INTERACTION MOLECULE 1; UBIQUITIN; UNCLASSIFIED DRUG; CARNITINE;

EID: 84949255712     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1005553     Document Type: Article
Times cited : (75)

References (38)
  • 2
    • 57149114936 scopus 로고    scopus 로고
    • Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum
    • Gieger C, Geistlinger L, Altmaier E, Hrabe de Angelis M, Kronenberg F, Meitinger T, et al. Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum. PLoS genetics. 2008;4(11):e1000282. doi: 10.1371/journal.pgen.1000282 19043545
    • (2008) PLoS genetics , vol.4 , Issue.11 , pp. 1000282
    • Gieger, C.1    Geistlinger, L.2    Altmaier, E.3    Hrabe de Angelis, M.4    Kronenberg, F.5    Meitinger, T.6
  • 4
    • 77953667219 scopus 로고    scopus 로고
    • Association of a peripheral blood metabolic profile with coronary artery disease and risk of subsequent cardiovascular events
    • Shah SH, Bain JR, Muehlbauer MJ, Stevens RD, Crosslin DR, Haynes C, et al. Association of a peripheral blood metabolic profile with coronary artery disease and risk of subsequent cardiovascular events. Circulation Cardiovascular genetics. 2010;3(2):207–14. doi: 10.1161/CIRCGENETICS.109.852814 20173117
    • (2010) Circulation Cardiovascular genetics , vol.3 , Issue.2 , pp. 207-214
    • Shah, S.H.1    Bain, J.R.2    Muehlbauer, M.J.3    Stevens, R.D.4    Crosslin, D.R.5    Haynes, C.6
  • 5
    • 84861304175 scopus 로고    scopus 로고
    • Baseline metabolomic profiles predict cardiovascular events in patients at risk for coronary artery disease
    • Shah SH, Sun JL, Stevens RD, Bain JR, Muehlbauer MJ, Pieper KS, et al. Baseline metabolomic profiles predict cardiovascular events in patients at risk for coronary artery disease. American heart journal. 2012;163(5):844–50 e1. doi: 10.1016/j.ahj.2012.02.005 22607863
    • (2012) American heart journal , vol.163 , Issue.5 , pp. 844-850
    • Shah, S.H.1    Sun, J.L.2    Stevens, R.D.3    Bain, J.R.4    Muehlbauer, M.J.5    Pieper, K.S.6
  • 6
    • 64349124452 scopus 로고    scopus 로고
    • High heritability of metabolomic profiles in families burdened with premature cardiovascular disease
    • Shah SH, Hauser ER, Bain JR, Muehlbauer MJ, Haynes C, Stevens RD, et al. High heritability of metabolomic profiles in families burdened with premature cardiovascular disease. Molecular systems biology. 2009;5:258. doi: 10.1038/msb.2009.11 19357637
    • (2009) Molecular systems biology , vol.5 , pp. 258
    • Shah, S.H.1    Hauser, E.R.2    Bain, J.R.3    Muehlbauer, M.J.4    Haynes, C.5    Stevens, R.D.6
  • 7
    • 84891620165 scopus 로고    scopus 로고
    • Validation of the association between a branched chain amino acid metabolite profile and extremes of coronary artery disease in patients referred for cardiac catheterization
    • Bhattacharya S, Granger CB, Craig D, Haynes C, Bain J, Stevens RD, et al. Validation of the association between a branched chain amino acid metabolite profile and extremes of coronary artery disease in patients referred for cardiac catheterization. Atherosclerosis. 2014;232(1):191–6. doi: 10.1016/j.atherosclerosis.2013.10.036 24401236
    • (2014) Atherosclerosis , vol.232 , Issue.1 , pp. 191-196
    • Bhattacharya, S.1    Granger, C.B.2    Craig, D.3    Haynes, C.4    Bain, J.5    Stevens, R.D.6
  • 9
    • 84863826750 scopus 로고    scopus 로고
    • BRSK2 is regulated by ER stress in protein level and involved in ER stress-induced apoptosis
    • Wang Y, Wan B, Li D, Zhou J, Li R, Bai M, et al. BRSK2 is regulated by ER stress in protein level and involved in ER stress-induced apoptosis. Biochemical and biophysical research communications. 2012;423(4):813–8. doi: 10.1016/j.bbrc.2012.06.046 22713462
    • (2012) Biochemical and biophysical research communications , vol.423 , Issue.4 , pp. 813-818
    • Wang, Y.1    Wan, B.2    Li, D.3    Zhou, J.4    Li, R.5    Bai, M.6
  • 10
    • 84862781811 scopus 로고    scopus 로고
    • A pro-inflammatory role of deubiquitinating enzyme cylindromatosis (CYLD) in vascular smooth muscle cells
    • Liu S, Lv J, Han L, Ichikawa T, Wang W, Li S, et al. A pro-inflammatory role of deubiquitinating enzyme cylindromatosis (CYLD) in vascular smooth muscle cells. Biochemical and biophysical research communications. 2012;420(1):78–83. doi: 10.1016/j.bbrc.2012.02.118 22406061
    • (2012) Biochemical and biophysical research communications , vol.420 , Issue.1 , pp. 78-83
    • Liu, S.1    Lv, J.2    Han, L.3    Ichikawa, T.4    Wang, W.5    Li, S.6
  • 12
    • 33847391557 scopus 로고    scopus 로고
    • Simultaneous quantification of acylcarnitine isomers containing dicarboxylic acylcarnitines in human serum and urine by high-performance liquid chromatography/electrospray ionization tandem mass spectrometry
    • Maeda Y, Ito T, Suzuki A, Kurono Y, Ueta A, Yokoi K, et al. Simultaneous quantification of acylcarnitine isomers containing dicarboxylic acylcarnitines in human serum and urine by high-performance liquid chromatography/electrospray ionization tandem mass spectrometry. Rapid communications in mass spectrometry: RCM. 2007;21(5):799–806. 17279485
    • (2007) Rapid communications in mass spectrometry: RCM , vol.21 , Issue.5 , pp. 799-806
    • Maeda, Y.1    Ito, T.2    Suzuki, A.3    Kurono, Y.4    Ueta, A.5    Yokoi, K.6
  • 13
    • 1842764661 scopus 로고    scopus 로고
    • Synthesis of dicarboxylic acylcarnitines
    • Johnson DW, Synthesis of dicarboxylic acylcarnitines. Chemistry and physics of lipids. 2004;129(2):161–71. 15081857
    • (2004) Chemistry and physics of lipids , vol.129 , Issue.2 , pp. 161-171
    • Johnson, D.W.1
  • 14
    • 67650620318 scopus 로고    scopus 로고
    • Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes
    • Reyes-Turcu FE, Ventii KH, Wilkinson KD, Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes. Annual review of biochemistry. 2009;78:363–97. doi: 10.1146/annurev.biochem.78.082307.091526 19489724
    • (2009) Annual review of biochemistry , vol.78 , pp. 363-397
    • Reyes-Turcu, F.E.1    Ventii, K.H.2    Wilkinson, K.D.3
  • 15
    • 77955868822 scopus 로고    scopus 로고
    • Association of genome-wide variation with the risk of incident heart failure in adults of European and African ancestry: a prospective meta-analysis from the cohorts for heart and aging research in genomic epidemiology (CHARGE) consortium
    • Smith NL, Felix JF, Morrison AC, Demissie S, Glazer NL, Loehr LR, et al. Association of genome-wide variation with the risk of incident heart failure in adults of European and African ancestry: a prospective meta-analysis from the cohorts for heart and aging research in genomic epidemiology (CHARGE) consortium. Circulation Cardiovascular genetics. 2010;3(3):256–66. doi: 10.1161/CIRCGENETICS.109.895763 20445134
    • (2010) Circulation Cardiovascular genetics , vol.3 , Issue.3 , pp. 256-266
    • Smith, N.L.1    Felix, J.F.2    Morrison, A.C.3    Demissie, S.4    Glazer, N.L.5    Loehr, L.R.6
  • 16
    • 85027955558 scopus 로고    scopus 로고
    • Platelet-derived growth factor maintains stored calcium through a nonclustering Orai1 mechanism but evokes clustering if the endoplasmic reticulum is stressed by store depletion
    • McKeown L, Moss NK, Turner P, Li J, Heath N, Burke D, et al. Platelet-derived growth factor maintains stored calcium through a nonclustering Orai1 mechanism but evokes clustering if the endoplasmic reticulum is stressed by store depletion. Circulation research. 2012;111(1):66–76. doi: 10.1161/CIRCRESAHA.111.263616 22556336
    • (2012) Circulation research , vol.111 , Issue.1 , pp. 66-76
    • McKeown, L.1    Moss, N.K.2    Turner, P.3    Li, J.4    Heath, N.5    Burke, D.6
  • 18
    • 0033166694 scopus 로고    scopus 로고
    • SGT1 encodes an essential component of the yeast kinetochore assembly pathway and a novel subunit of the SCF ubiquitin ligase complex
    • Kitagawa K, Skowyra D, Elledge SJ, Harper JW, Hieter P, SGT1 encodes an essential component of the yeast kinetochore assembly pathway and a novel subunit of the SCF ubiquitin ligase complex. Molecular cell. 1999;4(1):21–33. 10445024
    • (1999) Molecular cell , vol.4 , Issue.1 , pp. 21-33
    • Kitagawa, K.1    Skowyra, D.2    Elledge, S.J.3    Harper, J.W.4    Hieter, P.5
  • 20
    • 84880724298 scopus 로고    scopus 로고
    • Protein kinase g positively regulates proteasome-mediated degradation of misfolded proteins
    • Ranek MJ, Terpstra EJ, Li J, Kass DA, Wang X, Protein kinase g positively regulates proteasome-mediated degradation of misfolded proteins. Circulation. 2013;128(4):365–76. doi: 10.1161/CIRCULATIONAHA.113.001971 23770744
    • (2013) Circulation , vol.128 , Issue.4 , pp. 365-376
    • Ranek, M.J.1    Terpstra, E.J.2    Li, J.3    Kass, D.A.4    Wang, X.5
  • 21
    • 72949098288 scopus 로고    scopus 로고
    • On to the road to degradation: atherosclerosis and the proteasome
    • Herrmann J, Lerman LO, Lerman A, On to the road to degradation: atherosclerosis and the proteasome. Cardiovascular research. 2010;85(2):291–302. doi: 10.1093/cvr/cvp333 19815565
    • (2010) Cardiovascular research , vol.85 , Issue.2 , pp. 291-302
    • Herrmann, J.1    Lerman, L.O.2    Lerman, A.3
  • 23
    • 0033969078 scopus 로고    scopus 로고
    • Induction of ubiquitin-conjugating enzyme by aggregated low density lipoprotein in human macrophages and its implications for atherosclerosis
    • Kikuchi J, Furukawa Y, Kubo N, Tokura A, Hayashi N, Nakamura M, et al. Induction of ubiquitin-conjugating enzyme by aggregated low density lipoprotein in human macrophages and its implications for atherosclerosis. Arteriosclerosis, thrombosis, and vascular biology. 2000;20(1):128–34. 10634809
    • (2000) Arteriosclerosis, thrombosis, and vascular biology , vol.20 , Issue.1 , pp. 128-134
    • Kikuchi, J.1    Furukawa, Y.2    Kubo, N.3    Tokura, A.4    Hayashi, N.5    Nakamura, M.6
  • 26
    • 77649309347 scopus 로고    scopus 로고
    • Preventive effect of a proteasome inhibitor on the formation of accelerated atherosclerosis in rabbits with uremia
    • Feng B, Zhang Y, Mu J, Ye Z, Zeng W, Qi W, et al. Preventive effect of a proteasome inhibitor on the formation of accelerated atherosclerosis in rabbits with uremia. Journal of cardiovascular pharmacology. 2010;55(2):129–38. doi: 10.1097/FJC.0b013e3181c87f8e 19935080
    • (2010) Journal of cardiovascular pharmacology , vol.55 , Issue.2 , pp. 129-138
    • Feng, B.1    Zhang, Y.2    Mu, J.3    Ye, Z.4    Zeng, W.5    Qi, W.6
  • 28
    • 33744978316 scopus 로고    scopus 로고
    • Increased activity of the ubiquitin-proteasome system in patients with symptomatic carotid disease is associated with enhanced inflammation and may destabilize the atherosclerotic plaque: effects of rosiglitazone treatment
    • Marfella R, D'Amico M, Di Filippo C, Baldi A, Siniscalchi M, Sasso FC, et al. Increased activity of the ubiquitin-proteasome system in patients with symptomatic carotid disease is associated with enhanced inflammation and may destabilize the atherosclerotic plaque: effects of rosiglitazone treatment. Journal of the American College of Cardiology. 2006;47(12):2444–55. 16781372
    • (2006) Journal of the American College of Cardiology , vol.47 , Issue.12 , pp. 2444-2455
    • Marfella, R.1    D'Amico, M.2    Di Filippo, C.3    Baldi, A.4    Siniscalchi, M.5    Sasso, F.C.6
  • 30
    • 77956358731 scopus 로고    scopus 로고
    • Reclassification of cardiovascular risk using integrated clinical and molecular biosignatures: Design of and rationale for the Measurement to Understand the Reclassification of Disease of Cabarrus and Kannapolis (MURDOCK) Horizon 1 Cardiovascular Disease Study
    • Shah SH, Granger CB, Hauser ER, Kraus WE, Sun JL, Pieper K, et al. Reclassification of cardiovascular risk using integrated clinical and molecular biosignatures: Design of and rationale for the Measurement to Understand the Reclassification of Disease of Cabarrus and Kannapolis (MURDOCK) Horizon 1 Cardiovascular Disease Study. American heart journal. 2010;160(3):371–9 e2. doi: 10.1016/j.ahj.2010.06.051 20826242
    • (2010) American heart journal , vol.160 , Issue.3 , pp. 371-379
    • Shah, S.H.1    Granger, C.B.2    Hauser, E.R.3    Kraus, W.E.4    Sun, J.L.5    Pieper, K.6
  • 32
    • 77955894071 scopus 로고    scopus 로고
    • METAL: fast and efficient meta-analysis of genomewide association scans
    • Willer CJ, Li Y, Abecasis GR, METAL: fast and efficient meta-analysis of genomewide association scans. Bioinformatics. 2010;26(17):2190–1. doi: 10.1093/bioinformatics/btq340 20616382
    • (2010) Bioinformatics , vol.26 , Issue.17 , pp. 2190-2191
    • Willer, C.J.1    Li, Y.2    Abecasis, G.R.3
  • 33
    • 84874396967 scopus 로고    scopus 로고
    • MethylPCA: a toolkit to control for confounders in methylome-wide association studies
    • Chen W, Gao G, Nerella S, Hultman CM, Magnusson PK, Sullivan PF, et al. MethylPCA: a toolkit to control for confounders in methylome-wide association studies. BMC bioinformatics. 2013;14:74. doi: 10.1186/1471-2105-14-74 23452721
    • (2013) BMC bioinformatics , vol.14 , pp. 74
    • Chen, W.1    Gao, G.2    Nerella, S.3    Hultman, C.M.4    Magnusson, P.K.5    Sullivan, P.F.6
  • 34
    • 46249088370 scopus 로고    scopus 로고
    • lumi: a pipeline for processing Illumina microarray
    • Du P, Kibbe WA, Lin SM, lumi: a pipeline for processing Illumina microarray. Bioinformatics. 2008;24(13):1547–8. doi: 10.1093/bioinformatics/btn224 18467348
    • (2008) Bioinformatics , vol.24 , Issue.13 , pp. 1547-1548
    • Du, P.1    Kibbe, W.A.2    Lin, S.M.3
  • 35
    • 84876806540 scopus 로고    scopus 로고
    • A data-driven approach to preprocessing Illumina 450K methylation array data
    • Pidsley R, CC YW, Volta M, Lunnon K, Mill J, Schalkwyk LC, A data-driven approach to preprocessing Illumina 450K methylation array data. BMC genomics. 2013;14:293. doi: 10.1186/1471-2164-14-293 23631413
    • (2013) BMC genomics , vol.14 , pp. 293
    • Pidsley, R.1    Cc, Y.W.2    Volta, M.3    Lunnon, K.4    Mill, J.5    Schalkwyk, L.C.6
  • 36
    • 84872564830 scopus 로고    scopus 로고
    • A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data
    • Teschendorff AE, Marabita F, Lechner M, Bartlett T, Tegner J, Gomez-Cabrero D, et al. A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data. Bioinformatics. 2013;29(2):189–96. doi: 10.1093/bioinformatics/bts680 23175756
    • (2013) Bioinformatics , vol.29 , Issue.2 , pp. 189-196
    • Teschendorff, A.E.1    Marabita, F.2    Lechner, M.3    Bartlett, T.4    Tegner, J.5    Gomez-Cabrero, D.6
  • 37
    • 84926507971 scopus 로고    scopus 로고
    • limma powers differential expression analyses for RNA-sequencing and microarray studies
    • Ritchie ME, Phipson B, Wu D, Hu Y, Law CW, Shi W, et al. limma powers differential expression analyses for RNA-sequencing and microarray studies. Nucleic acids research. 2015;43(7):e47. doi: 10.1093/nar/gkv007 25605792
    • (2015) Nucleic acids research , vol.43 , Issue.7 , pp. 47
    • Ritchie, M.E.1    Phipson, B.2    Wu, D.3    Hu, Y.4    Law, C.W.5    Shi, W.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.