-
1
-
-
77449121614
-
Target-enrichment strategies for next-generation sequencing
-
Mamanova, L., et al. Target-enrichment strategies for next-generation sequencing. Nat. Methods 7, 111-118 (2010
-
(2010)
Nat. Methods
, vol.7
, pp. 111-118
-
-
Mamanova, L.1
-
2
-
-
0024605518
-
Analysis of any point mutation in DNA the amplification refractory mutation system (ARMS)
-
Newton, C.R., et al. Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS). Nucleic Acids Res. 17, 2503-2516 (1989
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 2503-2516
-
-
Newton, C.R.1
-
3
-
-
84874533657
-
Combining highly multiplexed PCR with semiconductor-based sequencing for rapid cancer genotyping
-
Beadling, C., et al. Combining highly multiplexed PCR with semiconductor-based sequencing for rapid cancer genotyping. J. Mol. Diagn. 15, 171-176 (2013
-
(2013)
J. Mol. Diagn
, vol.15
, pp. 171-176
-
-
Beadling, C.1
-
4
-
-
79951475133
-
A decade's perspective on DNA sequencing technology
-
Mardis, E.R. A decade's perspective on DNA sequencing technology. Nature 470, 198-203 (2011
-
(2011)
Nature
, vol.470
, pp. 198-203
-
-
Mardis, E.R.1
-
5
-
-
84869457261
-
The expanding scope of DNA sequencing
-
Shendure, J., & Aiden, E.L. The expanding scope of DNA sequencing. Nat. Biotechnol. 30, 1084-1094 (2012
-
(2012)
Nat. Biotechnol
, vol.30
, pp. 1084-1094
-
-
Shendure, J.1
Aiden, E.L.2
-
6
-
-
84975795680
-
An integrated map of genetic variation from 1, 092 human genomes
-
1000 Genomes Project Consortium., et al.
-
1000 Genomes Project Consortium., et al. An integrated map of genetic variation from 1, 092 human genomes. Nature 491, 56-65 (2012
-
(2012)
Nature
, vol.491
, pp. 56-65
-
-
-
7
-
-
84863116178
-
Thermodynamic optimization of nucleic acid hybridization specificity
-
Zhang, D.Y., Chen, S.X., & Yin, P. Thermodynamic optimization of nucleic acid hybridization specificity. Nat. Chem. 4, 208-214 (2012
-
(2012)
Nat. Chem
, vol.4
, pp. 208-214
-
-
Zhang, D.Y.1
Chen, S.X.2
Yin, P.3
-
8
-
-
84932600780
-
Simulation-guided probe design for consistently ultraspecific hybridization
-
Wang, J.S., & Zhang, D.Y. Simulation-guided probe design for consistently ultraspecific hybridization. Nat. Chem. 7, 545-553 (2015
-
(2015)
Nat. Chem
, vol.7
, pp. 545-553
-
-
Wang, J.S.1
Zhang, D.Y.2
-
9
-
-
0033033430
-
Thermodynamic basis of the enhanced specificity of structured DNA probes
-
Bonnet, G., Tyagi, S., Libchaber, A., & Kramer, F.R. Thermodynamic basis of the enhanced specificity of structured DNA probes. Proc. Natl. Acad. Sci. USA 96, 6171-6176 (1999
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 6171-6176
-
-
Bonnet, G.1
Tyagi, S.2
Libchaber, A.3
Kramer, F.R.4
-
10
-
-
43249095784
-
Predicting stability of DNA duplexes in solutions containing magnesium and monovalent cations
-
Owczarzy, R., Moreira, B.G., You, Y., Behlke, M.A., & Walder, J.A. Predicting stability of DNA duplexes in solutions containing magnesium and monovalent cations. Biochemistry 47, 5336-5353 (2008
-
(2008)
Biochemistry
, vol.47
, pp. 5336-5353
-
-
Owczarzy, R.1
Moreira, B.G.2
You, Y.3
Behlke, M.A.4
Walder, J.A.5
-
11
-
-
84865022311
-
Primer3-new capabilities and interfaces
-
Untergasser, A., et al. Primer3-new capabilities and interfaces. Nucleic Acids Res. 40, e115 (2012
-
(2012)
Nucleic Acids Res
, vol.40
, pp. e115
-
-
Untergasser, A.1
-
12
-
-
78649297854
-
Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing
-
Teer, J.K., et al. Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing. Genome Res. 20, 1420-1431 (2010
-
(2010)
Genome Res
, vol.20
, pp. 1420-1431
-
-
Teer, J.K.1
-
13
-
-
84925582188
-
Anchored multiplex PCR for targeted next-generation sequencing
-
Zheng, Z., et al. Anchored multiplex PCR for targeted next-generation sequencing. Nat. Med. 20, 1479-1484 (2014
-
(2014)
Nat. Med
, vol.20
, pp. 1479-1484
-
-
Zheng, Z.1
-
14
-
-
58549109608
-
Accurate SHAPE-directed RNA structure determination
-
Deigan, K.E., Li, T.W., Mathews, D.H., & Weeks, K.M. Accurate SHAPE-directed RNA structure determination. Proc. Natl. Acad. Sci. USA 106, 97-102 (2009
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 97-102
-
-
Deigan, K.E.1
Li, T.W.2
Mathews, D.H.3
Weeks, K.M.4
-
16
-
-
0031462334
-
Measuring the thermodynamics of RNA secondary structure formation
-
SantaLucia, J., & Turner, D.H. Measuring the thermodynamics of RNA secondary structure formation. Biopolymers 44, 309-319 (1997
-
(1997)
Biopolymers
, vol.44
, pp. 309-319
-
-
SantaLucia, J.1
Turner, D.H.2
-
17
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31, 3406-3415 (2003
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
18
-
-
78149355812
-
NUPACK: Analysis and design of nucleic acid systems
-
Zadeh, J.N., et al. NUPACK: analysis and design of nucleic acid systems. J. Comput. Chem. 32, 170-173 (2011
-
(2011)
J. Comput. Chem
, vol.32
, pp. 170-173
-
-
Zadeh, J.N.1
-
19
-
-
80054757012
-
Performance comparison of exome DNA sequencing technologies
-
Clark, M.J., et al. Performance comparison of exome DNA sequencing technologies. Nat. Biotechnol. 29, 908-914 (2011
-
(2011)
Nat. Biotechnol
, vol.29
, pp. 908-914
-
-
Clark, M.J.1
-
20
-
-
35348847064
-
SNP genotyping: Technologies and biomedical applications
-
Kim, S., & Misra, A. SNP genotyping: technologies and biomedical applications. Annu. Rev. Biomed. Eng. 9, 289-320 (2007
-
(2007)
Annu. Rev. Biomed. Eng
, vol.9
, pp. 289-320
-
-
Kim, S.1
Misra, A.2
-
21
-
-
0029670262
-
Molecular beacons: Probes that fluoresce upon hybridization
-
Tyagi, S., & Kramer, F.R. Molecular beacons: probes that fluoresce upon hybridization. Nat. Biotechnol. 14, 303-308 (1996
-
(1996)
Nat. Biotechnol
, vol.14
, pp. 303-308
-
-
Tyagi, S.1
Kramer, F.R.2
-
22
-
-
40449100030
-
Direct multiplexed measurement of gene expression with color-coded probe pairs
-
Geiss, G.K., et al. Direct multiplexed measurement of gene expression with color-coded probe pairs. Nat. Biotechnol. 26, 317-325 (2008
-
(2008)
Nat. Biotechnol
, vol.26
, pp. 317-325
-
-
Geiss, G.K.1
-
23
-
-
78651330430
-
COSMIC: Mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer
-
Forbes, S.A., et al. COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer. Nucleic Acids Res. 39, D945-D950 (2011
-
(2011)
Nucleic Acids Res
, vol.39
, pp. D945-D950
-
-
Forbes, S.A.1
-
24
-
-
84857567340
-
Nucleic acid hybridization: Robust sequence discrimination
-
Altan-Bonnet, G., & Kramer, F.R. Nucleic acid hybridization: robust sequence discrimination. Nat. Chem. 4, 155-157 (2012
-
(2012)
Nat. Chem
, vol.4
, pp. 155-157
-
-
Altan-Bonnet, G.1
Kramer, F.R.2
-
25
-
-
72249110882
-
Control of DNA strand displacement kinetics using toehold exchange
-
Zhang, D.Y., & Winfree, E. Control of DNA strand displacement kinetics using toehold exchange. J. Am. Chem. Soc. 131, 17303-17314 (2009
-
(2009)
J. Am. Chem. Soc
, vol.131
, pp. 17303-17314
-
-
Zhang, D.Y.1
Winfree, E.2
-
26
-
-
59849113821
-
Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing
-
Gnirke, A., et al. Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing. Nat. Biotechnol. 27, 182-189 (2009
-
(2009)
Nat. Biotechnol
, vol.27
, pp. 182-189
-
-
Gnirke, A.1
-
27
-
-
33947116356
-
Multifunctional encoded particles for high-throughput biomolecule analysis
-
Pregibon, D.C., Toner, M., & Doyle, P.S. Multifunctional encoded particles for high-throughput biomolecule analysis. Science 315, 1393-1396 (2007
-
(2007)
Science
, vol.315
, pp. 1393-1396
-
-
Pregibon, D.C.1
Toner, M.2
Doyle, P.S.3
-
28
-
-
84932633736
-
An electrochemical clamp assay for direct, rapid analysis of circulating nucleic acids in serum
-
Das, J., et al. An electrochemical clamp assay for direct, rapid analysis of circulating nucleic acids in serum. Nat. Chem. 7, 569-575 (2015
-
(2015)
Nat. Chem
, vol.7
, pp. 569-575
-
-
Das, J.1
-
29
-
-
27544436206
-
Label-free detection of peptide nucleic acid-DNA hybridization using localized surface plasmon resonance based optical biosensor
-
Endo, T., Kerman, K., Nagatani, N., Takamura, Y., & Tamiya, E. Label-free detection of peptide nucleic acid-DNA hybridization using localized surface plasmon resonance based optical biosensor. Anal. Chem. 77, 6976-6984 (2005
-
(2005)
Anal. Chem
, vol.77
, pp. 6976-6984
-
-
Endo, T.1
Kerman, K.2
Nagatani, N.3
Takamura, Y.4
Tamiya, E.5
|