-
1
-
-
84907193791
-
2014 Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak
-
Gire SK et al. 2014 Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak. Science 345, 1369-1372. (doi:10.1126/Science.1259657)
-
Science
, vol.345
, pp. 1369-1372
-
-
Gire, S.K.1
-
6
-
-
84921319630
-
Spatiotemporal spread of the 2014 outbreak of Ebola virus disease in Liberia and the effectiveness of non-pharmaceutical interventions: A computational modelling analysis
-
Merler S et al. 2015 Spatiotemporal spread of the 2014 outbreak of Ebola virus disease in Liberia and the effectiveness of non-pharmaceutical interventions: a computational modelling analysis. Lancet Infect. Dis. 15, 204-211. (doi:10.1016/S1473-3099(14)71074-6)
-
(2015)
Lancet Infect. Dis.
, vol.15
, pp. 204-211
-
-
Merler, S.1
-
7
-
-
84907982864
-
Assessing the international spreading risk associated with the 2014 West African Ebola outbreak
-
2 Sep 2014, 1st edn
-
Gomes MF, Piontti AP, Rossi L, Chao D, Longini I, Halloran ME, Vespignani A. 2014 Assessing the international spreading risk associated with the 2014 West African Ebola outbreak. PLoS Curr. Outbreaks. 2 Sep 2014, 1st edn. (doi:10.1371/currents.outbreaks. cd818f63d40e24aef769dda7df9e0da5)
-
(2014)
PLoS Curr. Outbreaks.
-
-
Gomes, M.F.1
Piontti, A.P.2
Rossi, L.3
Chao, D.4
Longini, I.5
Halloran, M.E.6
Vespignani, A.7
-
8
-
-
76049115282
-
Multiscale mobility networks and the spatial spreading of infectious diseases
-
Balcan D, Colizza V, Goncalves B, Hu H, Ramasco JJ, Vespignani A. 2009 Multiscale mobility networks and the spatial spreading of infectious diseases. Proc. Natl Acad. Sci. USA 106, 21 484-21 489. (doi:10.1073/pnas.0906910106)
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 21484-21489
-
-
Balcan, D.1
Colizza, V.2
Goncalves, B.3
Hu, H.4
Ramasco, J.J.5
Vespignani, A.6
-
9
-
-
34249883600
-
Large-scale spatial-transmission models of infectious disease
-
Riley S. 2007 Large-scale spatial-transmission models of infectious disease. Science 316, 1298-1301. (doi:10.1126/science.1134695)
-
(2007)
Science
, vol.316
, pp. 1298-1301
-
-
Riley, S.1
-
10
-
-
33646006370
-
Synchrony, waves, and spatial hierarchies in the spread of influenza
-
Viboud C, Bjornstad ON, Smith DL, Simonsen L, Miller MA, Grenfell BT. 2006 Synchrony, waves, and spatial hierarchies in the spread of influenza. Science 312, 447-451. (doi:10.1126/science.1125237)
-
(2006)
Science
, vol.312
, pp. 447-451
-
-
Viboud, C.1
Bjornstad, O.N.2
Smith, D.L.3
Simonsen, L.4
Miller, M.A.5
Grenfell, B.T.6
-
11
-
-
84908249264
-
Ebola: Mobility data
-
Halloran ME et al. 2014 Ebola: mobility data. Science 346, 433.
-
(2014)
Science
, vol.346
, pp. 433
-
-
Halloran, M.E.1
-
12
-
-
84923285575
-
Commentary: Containing the Ebola outbreak: The potential and challenge of mobile network data
-
Wesolowski A, Buckee C, Bengtsson L, Wetter E, Lu X, Tatem A. 2014 Commentary: containing the Ebola outbreak: the potential and challenge of mobile network data. PLoS Curr. Outbreaks.
-
(2014)
PLoS Curr. Outbreaks
-
-
Wesolowski, A.1
Buckee, C.2
Bengtsson, L.3
Wetter, E.4
Lu, X.5
Tatem, A.6
-
13
-
-
84908457460
-
Estimating the future number of cases in the Ebola epidemic: Liberia and Sierra Leone, 2014-2015
-
Meltzer MI et al. 2014 Estimating the future number of cases in the Ebola epidemic: Liberia and Sierra Leone, 2014-2015. MMWR Surveill. Summ. 63(Suppl. 3), 1-14.
-
(2014)
MMWR Surveill. Summ.
, vol.63
, pp. 1-14
-
-
Meltzer, M.I.1
-
14
-
-
84911891126
-
Strategies for containing Ebola in West Africa
-
Pandey A et al. 2014 Strategies for containing Ebola in West Africa. Science 346, 991-995. (doi:10. 1126/science.1260612)
-
(2014)
Science
, vol.346
, pp. 991-995
-
-
Pandey, A.1
-
15
-
-
84919912688
-
Inference and forecast of the current West African Ebola outbreak in Guinea, Sierra Leone and Liberia
-
31 Oct 2014, 1st edn
-
Shaman J, Yang W, Kandula S. 2014 Inference and forecast of the current West African Ebola outbreak in Guinea, Sierra Leone and Liberia. PLoS Curr. Outbreaks. 31 Oct 2014, 1st edn. (doi:10.1371/currents.outbreaks. 3408774290b1a0f2dd7cae877c8b8ff6)
-
(2014)
PLoS Curr. Outbreaks.
-
-
Shaman, J.1
Yang, W.2
Kandula, S.3
-
16
-
-
34247475255
-
Understanding the dynamics of Ebola epidemics
-
Legrand J, Grais RF, Boelle PY, Valleron AJ, Flahault A. 2007 Understanding the dynamics of Ebola epidemics. Epidemiol. Infect. 135, 610-621. (doi:10.1017/S0950268806007217)
-
(2007)
Epidemiol. Infect.
, vol.135
, pp. 610-621
-
-
Legrand, J.1
Grais, R.F.2
Boelle, P.Y.3
Valleron, A.J.4
Flahault, A.5
-
17
-
-
84948680269
-
Temporal changes in Ebola transmission in Sierra Leone and implications for control requirements: A real-time modelling study
-
Feb 2015 1st edn
-
Camacho A et al. 2015 Temporal changes in Ebola transmission in Sierra Leone and implications for control requirements: a real-time modelling study. PLoS Curr. Outbreaks. 10 Feb 2015, 1st edn. (doi:10.1371/currents.outbreaks.406ae55e83ec 0b5193e30856b9235ed2)
-
(2015)
PLoS Curr. Outbreaks.
, vol.10
-
-
Camacho, A.1
-
18
-
-
84922226137
-
Modeling the impact of interventions on an epidemic of Ebola in Sierra Leone and Liberia
-
Rivers C, Lofgren E, Marathe M, Eubank S, Lewis B. 2014 Modeling the impact of interventions on an epidemic of Ebola in Sierra Leone and Liberia. PLoS Curr. Outbreaks. (doi:10.1371/currents.outbreaks. 4d41fe5d6c05e9df30ddce33c66d084c)
-
(2014)
PLoS Curr. Outbreaks
-
-
Rivers, C.1
Lofgren, E.2
Marathe, M.3
Eubank, S.4
Lewis, B.5
-
19
-
-
84940367230
-
The Western Africa Ebola virus disease epidemic exhibits both global exponential and local polynomial growth rates
-
21 Jan 2015, 1st edn
-
Chowell G, Viboud C, Hyman J, Simonsen L. 2015 The Western Africa Ebola virus disease epidemic exhibits both global exponential and local polynomial growth rates. PLoS Curr. Outbreaks. 21 Jan 2015, 1st edn. (doi:10.1371/currents.outbreaks. 8b55f4bad99ac5 c5db3663e916803261)
-
(2015)
PLoS Curr. Outbreaks.
-
-
Chowell, G.1
Viboud, C.2
Hyman, J.3
Simonsen, L.4
-
20
-
-
84922250260
-
Ebola cases and health system demand in Liberia
-
Drake JM, Kaul RB, Alexander LW, O'Regan SM, Kramer AM, Pulliam JT, Ferrari MJ, Park AW. 2015 Ebola cases and health system demand in Liberia. PLoS Biol. 13, e1002056. (doi:10.1371/journal.pbio. 1002056)
-
(2015)
PLoS Biol.
, vol.13
-
-
Drake, J.M.1
Kaul, R.B.2
Alexander, L.W.3
O'Regan, S.M.4
Kramer, A.M.5
Pulliam, J.T.6
Ferrari, M.J.7
Park, A.W.8
-
23
-
-
84924132651
-
Inference of seasonal and pandemic influenza transmission dynamics
-
Yang W, Lipsitch M, Shaman J. 2015 Inference of seasonal and pandemic influenza transmission dynamics. Proc. Natl Acad. Sci. USA 112, 2723-2728. (doi:10.1073/pnas.1415012112)
-
(2015)
Proc. Natl Acad. Sci. USA
, vol.112
, pp. 2723-2728
-
-
Yang, W.1
Lipsitch, M.2
Shaman, J.3
-
24
-
-
79955765273
-
Cholera epidemic in Haiti, 2010: Using a transmission model to explain spatial spread of disease and identify optimal control interventions
-
Tuite AR, Tien J, Eisenberg M, Earn DJ, Ma J, Fisman DN. 2011 Cholera epidemic in Haiti, 2010: using a transmission model to explain spatial spread of disease and identify optimal control interventions. Ann. Intern. Med. 154, 593-601. (doi:10.7326/0003-4819-154-9-201105030-00334)
-
(2011)
Ann. Intern. Med.
, vol.154
, pp. 593-601
-
-
Tuite, A.R.1
Tien, J.2
Eisenberg, M.3
Earn, D.J.4
Ma, J.5
Fisman, D.N.6
-
25
-
-
0035655814
-
An ensemble adjustment Kalman filter for data assimilation
-
Anderson JL. 2001 An ensemble adjustment Kalman filter for data assimilation. Mon. Weather Rev. 129, 2884-2903. (doi:10.1175/1520-0493(2001)129,2884:aeakff.2.0.co;2)
-
(2001)
Mon. Weather Rev.
, vol.129
, pp. 2884-2903
-
-
Anderson, J.L.1
-
26
-
-
84870859794
-
Forecasting seasonal outbreaks of influenza
-
Shaman J, Karspeck A. 2012 Forecasting seasonal outbreaks of influenza. Proc. Natl Acad. Sci. USA 109, 20 425-20 430. (doi:10.1073/pnas. 1208772109)
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 20425-20430
-
-
Shaman, J.1
Karspeck, A.2
-
27
-
-
84901348387
-
Comparison of filtering methods for the modeling and retrospective forecasting of influenza epidemics
-
Yang W, Karspeck A, Shaman J. 2014 Comparison of filtering methods for the modeling and retrospective forecasting of influenza epidemics. PLoS Comput. Biol. 10, e1003583. (doi:10.1371/journal.pcbi.1003583)
-
(2014)
PLoS Comput. Biol.
, vol.10
-
-
Yang, W.1
Karspeck, A.2
Shaman, J.3
-
28
-
-
84908072433
-
Ebola virus disease in West Africa: The first 9 months of the epidemic and forward projections
-
WHO Ebola Response Team. 2014 Ebola virus disease in West Africa: the first 9 months of the epidemic and forward projections. N. Engl. J. Med. 371, 1481-1495. (doi:10.1056/NEJMoa1411100)
-
(2014)
N. Engl. J. Med.
, vol.371
, pp. 1481-1495
-
-
-
29
-
-
84922311621
-
West African Ebola epidemic after one year: Slowing but not yet under control
-
WHO Ebola Response Team. 2015 West African Ebola epidemic after one year: slowing but not yet under control. N. Engl. J. Med. 372, 584-587. (doi:10.1056/NEJMc1414992)
-
(2015)
N. Engl. J. Med.
, vol.372
, pp. 584-587
-
-
-
30
-
-
84924759811
-
Modeling internal migration flows in sub-Saharan Africa using census microdata
-
Garcia AJ, Pindolia DK, Lopiano KK, Tatem AJ. 2014 Modeling internal migration flows in sub-Saharan Africa using census microdata. Migration Stud. (doi:10.1093/migration/mnu036)
-
(2014)
Migration Stud
-
-
Garcia, A.J.1
Pindolia, D.K.2
Lopiano, K.K.3
Tatem, A.J.4
-
31
-
-
84958576391
-
Understanding the emergence of Ebola virus disease in Sierra Leone: Stalking the virus in the threatening wake of emergence
-
20 April 2015, 1st edn
-
Wauquier N et al. 2015 Understanding the emergence of Ebola virus disease in Sierra Leone: stalking the virus in the threatening wake of emergence. PLoS Curr. Outbreaks. 20 April 2015, 1st edn. (doi:10.1371/currents.outbreaks.9a6530ab7bb9096b3414323 0ab01cdef )
-
(2015)
PLoS Curr. Outbreaks.
-
-
Wauquier, N.1
-
32
-
-
84926359252
-
Avoidable errors in the modelling of outbreaks of emerging pathogens, with special reference to Ebola
-
King AA, Domenech de Cellés M, Magpantay FMG, Rohani P. 2015 Avoidable errors in the modelling of outbreaks of emerging pathogens, with special reference to Ebola. Proc R. Soc. B 282, 20150347. (doi:10.1098/rspb.2015.0347)
-
(2015)
Proc R. Soc. B
, vol.282
, pp. 20150347
-
-
King, A.A.1
Domenech De Cellés, M.2
Magpantay, F.M.G.3
Rohani, P.4
-
35
-
-
84994053884
-
Coupled lattice model with commuter-like coupling
-
1st edn. Princeton, NJ: Princeton University Press
-
Keeling MJ, Rohani P. 2007 Coupled lattice model with commuter-like coupling. In Modeling infectious diseases in humans and animals, 256, 1st edn. Princeton, NJ: Princeton University Press.
-
(2007)
Modeling Infectious Diseases in Humans and Animals
, pp. 256
-
-
Keeling, M.J.1
Rohani, P.2
-
37
-
-
85024429815
-
A new approach to linear filtering and prediction problems
-
Kalman RE. 1960 A new approach to linear filtering and prediction problems. J. Basic Eng. 82, 35-45. (doi:10.1115/1.3662552)
-
(1960)
J. Basic Eng.
, vol.82
, pp. 35-45
-
-
Kalman, R.E.1
-
38
-
-
84890239936
-
Real-time influenza forecasts during the 2012-2013 season
-
Shaman J, Karspeck A, Yang W, Tamerius J, Lipsitch M. 2013 Real-time influenza forecasts during the 2012-2013 season. Nat. Commun. 4, 2837. (doi:10. 1038/ncomms3837)
-
(2013)
Nat. Commun.
, vol.4
, pp. 2837
-
-
Shaman, J.1
Karspeck, A.2
Yang, W.3
Tamerius, J.4
Lipsitch, M.5
-
39
-
-
34247642674
-
An adaptive covariance inflation error correction algorithm for ensemble filters
-
Anderson JL. 2007 An adaptive covariance inflation error correction algorithm for ensemble filters. Tellus A 59, 210-224. (doi:10.1111/j.1600-0870.2006. 00216.x)
-
(2007)
Tellus A
, vol.59
, pp. 210-224
-
-
Anderson, J.L.1
-
40
-
-
58049084742
-
Spatially and temporally varying adaptive covariance inflation for ensemble filters
-
Anderson JL. 2009 Spatially and temporally varying adaptive covariance inflation for ensemble filters. Tellus A 61, 72-83. (doi:10.1111/j.1600-0870.2008. 00361.x)
-
(2009)
Tellus A
, vol.61
, pp. 72-83
-
-
Anderson, J.L.1
-
41
-
-
74949130817
-
Particle filtering in geophysical systems
-
van Leeuwen PJ. 2009 Particle filtering in geophysical systems. Mon. Weather Rev. 137, 4089-4114. (doi:10.1175/2009MWR2835.1)
-
(2009)
Mon. Weather Rev.
, vol.137
, pp. 4089-4114
-
-
Van Leeuwen, P.J.1
-
42
-
-
77951131231
-
A tutorial on particle filtering and smoothing: Fifteen years later
-
Doucet A, Johansen AM. 2009 A tutorial on particle filtering and smoothing: fifteen years later. Handb. Nonlinear Filter. 12, 656-704.
-
(2009)
Handb. Nonlinear Filter.
, vol.12
, pp. 656-704
-
-
Doucet, A.1
Johansen, A.M.2
-
43
-
-
66149153486
-
The spread of awareness and its impact on epidemic outbreaks
-
Funk S, Gilad E, Watkins C, Jansen VAA. 2009 The spread of awareness and its impact on epidemic outbreaks. Proc. Natl Acad. Sci. USA 106, 6872-6877. (doi:10.1073/pnas.0810762106)
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 6872-6877
-
-
Funk, S.1
Gilad, E.2
Watkins, C.3
Jansen, V.A.A.4
|