-
1
-
-
16844382828
-
Determination of the bacteriocin-like substances produced by some lactic acid bacteria isolated from Turkish dairy products
-
Aslim B., Yuksekdag Z., Sarikaya E., Beyatli Y. Determination of the bacteriocin-like substances produced by some lactic acid bacteria isolated from Turkish dairy products. LWT Food Sci. Technol. 2005, 36:691-694.
-
(2005)
LWT Food Sci. Technol.
, vol.36
, pp. 691-694
-
-
Aslim, B.1
Yuksekdag, Z.2
Sarikaya, E.3
Beyatli, Y.4
-
2
-
-
4344695108
-
Cell growth and bacteriocin production of probiotic Lactobacillus strains in different media
-
Avonts L., Van Uytven E., De Vuyst L. Cell growth and bacteriocin production of probiotic Lactobacillus strains in different media. Int. Dairy J. 2004, 14:947-955.
-
(2004)
Int. Dairy J.
, vol.14
, pp. 947-955
-
-
Avonts, L.1
Van Uytven, E.2
De Vuyst, L.3
-
3
-
-
84879514636
-
Bacterial diversity in meconium of preterm neonates and evolution of their fecal microbiota during the first month of life
-
Moles L., Gomez M., Heilig H., Bustos G., Fuentes S., de Vos W., Fernandez L., Rodriguez J.M., Jimenez E. Bacterial diversity in meconium of preterm neonates and evolution of their fecal microbiota during the first month of life. PLoS One 2013, 8:e66986.
-
(2013)
PLoS One
, vol.8
, pp. e66986
-
-
Moles, L.1
Gomez, M.2
Heilig, H.3
Bustos, G.4
Fuentes, S.5
de Vos, W.6
Fernandez, L.7
Rodriguez, J.M.8
Jimenez, E.9
-
4
-
-
84874006300
-
Bacterial community dynamics, lactic acid bacteria species diversity and metabolite kinetics of traditional Romanian vegetable fermentations
-
Wouters D., Grosu-Tudor S., Zamfir M., De Vuyst L. Bacterial community dynamics, lactic acid bacteria species diversity and metabolite kinetics of traditional Romanian vegetable fermentations. J. Sci. Food Agric. 2013, 93:749-760.
-
(2013)
J. Sci. Food Agric.
, vol.93
, pp. 749-760
-
-
Wouters, D.1
Grosu-Tudor, S.2
Zamfir, M.3
De Vuyst, L.4
-
5
-
-
84922554366
-
Probiotic screening and safety evaluation of Lactobacillus strains from plants, artisanal goat cheese, human stools, and breast milk
-
Gotteland M., Jose Cires M., Carvallo C., Vega N., Antonieta Ramirez M., Morales P., Rivas P., Astudillo F., Navarrete P., Dubos C. Probiotic screening and safety evaluation of Lactobacillus strains from plants, artisanal goat cheese, human stools, and breast milk. J. Med. Food 2014, 17:487-495.
-
(2014)
J. Med. Food
, vol.17
, pp. 487-495
-
-
Gotteland, M.1
Jose Cires, M.2
Carvallo, C.3
Vega, N.4
Antonieta Ramirez, M.5
Morales, P.6
Rivas, P.7
Astudillo, F.8
Navarrete, P.9
Dubos, C.10
-
6
-
-
59349089589
-
Monitoring Lactobacillus plantarum BCC 9546 starter culture during fermentation of Nham, a traditional Thai pork sausage
-
Luxananil P., Promchai R., Wanasen S., Kamdee S., Thepkasikul P., Plengvidhya V., Visessanguan W., Valyasevi R. Monitoring Lactobacillus plantarum BCC 9546 starter culture during fermentation of Nham, a traditional Thai pork sausage. Int. J. Food Microbiol. 2009, 129:312-315.
-
(2009)
Int. J. Food Microbiol.
, vol.129
, pp. 312-315
-
-
Luxananil, P.1
Promchai, R.2
Wanasen, S.3
Kamdee, S.4
Thepkasikul, P.5
Plengvidhya, V.6
Visessanguan, W.7
Valyasevi, R.8
-
7
-
-
84867099642
-
Safety of a probiotic cheese containing Lactobacillus plantarum Tensia according to a variety of health indices in different age groups
-
Songisepp E., Huett P., Raetsep M., Shkut E., Koljalg S., Truusalu K., Stsepetova J., Smidt I., Kolk H., Zagura M. Safety of a probiotic cheese containing Lactobacillus plantarum Tensia according to a variety of health indices in different age groups. J. Dairy Sci. 2012, 95:5495-5509.
-
(2012)
J. Dairy Sci.
, vol.95
, pp. 5495-5509
-
-
Songisepp, E.1
Huett, P.2
Raetsep, M.3
Shkut, E.4
Koljalg, S.5
Truusalu, K.6
Stsepetova, J.7
Smidt, I.8
Kolk, H.9
Zagura, M.10
-
8
-
-
78149495201
-
Identification of Lactobacillus plantarum genes modulating the cytokine response of human peripheral blood mononuclear cells
-
van Hemert S., Meijerink M., Molenaar D., Bron P.A., de Vos P., Kleerebezem M., Wells J.M., Marco M.L. Identification of Lactobacillus plantarum genes modulating the cytokine response of human peripheral blood mononuclear cells. BMC Microbiol. 2010, 10. 10.1186/1471-2180-10-293.
-
(2010)
BMC Microbiol.
, vol.10
-
-
van Hemert, S.1
Meijerink, M.2
Molenaar, D.3
Bron, P.A.4
de Vos, P.5
Kleerebezem, M.6
Wells, J.M.7
Marco, M.L.8
-
9
-
-
0031976890
-
Decrease in fibrinogen and LDL-cholesterol levels upon supplementation of diet with Lactobacillus plantarum in subjects with moderately elevated cholesterol
-
Bukowska H., Pieczul-Mroz J., Jastrzebska M., Chelstowski K., Naruszewicz M. Decrease in fibrinogen and LDL-cholesterol levels upon supplementation of diet with Lactobacillus plantarum in subjects with moderately elevated cholesterol. Atherosclerosis 1998, 137:437-438.
-
(1998)
Atherosclerosis
, vol.137
, pp. 437-438
-
-
Bukowska, H.1
Pieczul-Mroz, J.2
Jastrzebska, M.3
Chelstowski, K.4
Naruszewicz, M.5
-
10
-
-
18744378321
-
Effect of Lactobacillus plantarum 299v on cardiovascular disease risk factors in smokers
-
Naruszewicz M., Johansson M., Zapolska-Downar D., Bukowska H. Effect of Lactobacillus plantarum 299v on cardiovascular disease risk factors in smokers. Am. J. Clin. Nutr. 2002, 76:1249-1255.
-
(2002)
Am. J. Clin. Nutr.
, vol.76
, pp. 1249-1255
-
-
Naruszewicz, M.1
Johansson, M.2
Zapolska-Downar, D.3
Bukowska, H.4
-
11
-
-
0028363268
-
Determination of chromosome size and number of rrn loci in Lactobacillus plantarum by pulsed-field gel electrophoresis
-
Chevallier B., Hubert J.-C., Kammerer B. Determination of chromosome size and number of rrn loci in Lactobacillus plantarum by pulsed-field gel electrophoresis. FEMS Microbiol. Lett. 1994, 120:51-56.
-
(1994)
FEMS Microbiol. Lett.
, vol.120
, pp. 51-56
-
-
Chevallier, B.1
Hubert, J.-C.2
Kammerer, B.3
-
12
-
-
0037452621
-
Complete genome sequence of Lactobacillus plantarum WCFS1
-
Kleerebezem M., Boekhorst J., Kranenburg R.v., Molenaa D., Kuipers O.P., Leer R., Tarchini R., Peters S.A., Sandbrink H.M., Fiers M.W.E.J., Stiekema W., Lankhorst R.M.K., Bron P.A., Hoffer S.M., Groot M.N.N., Kerkhoven R., Vries M.d., Ursing B., Vos W.M.d., Siezen R.J. Complete genome sequence of Lactobacillus plantarum WCFS1. Proc. Natl. Acad. Sci. U. S. A. 2003, 100:1990-1995.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 1990-1995
-
-
Kleerebezem, M.1
Boekhorst, J.2
Kranenburg, R.3
Molenaa, D.4
Kuipers, O.P.5
Leer, R.6
Tarchini, R.7
Peters, S.A.8
Sandbrink, H.M.9
Fiers, M.W.E.J.10
Stiekema, W.11
Lankhorst, R.M.K.12
Bron, P.A.13
Hoffer, S.M.14
Groot, M.N.N.15
Kerkhoven, R.16
Vries, M.17
Ursing, B.18
Vos, W.19
Siezen, R.J.20
more..
-
13
-
-
67749119792
-
Complete genome sequence of Lactobacillus plantarum JDM1
-
Zhang Z.Y., Liu C., Zhu Y.Z., Zhong Y., Zhu Y.Q., Zheng H.J., Zhao G.P., Wang S.Y., Guo X.K. Complete genome sequence of Lactobacillus plantarum JDM1. Genome Announc. 2009, 191:5020-5021.
-
(2009)
Genome Announc.
, vol.191
, pp. 5020-5021
-
-
Zhang, Z.Y.1
Liu, C.2
Zhu, Y.Z.3
Zhong, Y.4
Zhu, Y.Q.5
Zheng, H.J.6
Zhao, G.P.7
Wang, S.Y.8
Guo, X.K.9
-
14
-
-
78650135852
-
Complete genome sequence of the probiotic Lactobacillus plantarum ST-III
-
Wang Y., Chen C., Ai L., Zhou F., Zhou Z., Wang L., Zhang H., Chen W., Guo B. Complete genome sequence of the probiotic Lactobacillus plantarum ST-III. J. Bacteriol. 2011, 193:313-314.
-
(2011)
J. Bacteriol.
, vol.193
, pp. 313-314
-
-
Wang, Y.1
Chen, C.2
Ai, L.3
Zhou, F.4
Zhou, Z.5
Wang, L.6
Zhang, H.7
Chen, W.8
Guo, B.9
-
15
-
-
84861217847
-
Genome sequence of the naturally plasmid-free Lactobacillus plantarum strain NC8 (CCUG 61730)
-
Axelsson L., Rud I., Naterstad K., Blom H., Renckens B., Boekhorst J., Kleerebezem M., Hijum S.v., Siezen R.J. Genome sequence of the naturally plasmid-free Lactobacillus plantarum strain NC8 (CCUG 61730). J. Bacteriol. 2012, 194:2391-2392.
-
(2012)
J. Bacteriol.
, vol.194
, pp. 2391-2392
-
-
Axelsson, L.1
Rud, I.2
Naterstad, K.3
Blom, H.4
Renckens, B.5
Boekhorst, J.6
Kleerebezem, M.7
Hijum, S.8
Siezen, R.J.9
-
16
-
-
3142748120
-
Where does bacterial replication start? Rules for predicting the oriC region
-
Mackiewicz P., Zakrzewska-Czerwinska J., Zawilak A., Dudek M.R., Cebrat S. Where does bacterial replication start? Rules for predicting the oriC region. Nucleic Acids Res. 2004, 32:3781-3791.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 3781-3791
-
-
Mackiewicz, P.1
Zakrzewska-Czerwinska, J.2
Zawilak, A.3
Dudek, M.R.4
Cebrat, S.5
-
17
-
-
0029026635
-
DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine
-
Kelman Z., O'Donnell M. DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine. Annu. Rev. Biochem. 1995, 64:171-200.
-
(1995)
Annu. Rev. Biochem.
, vol.64
, pp. 171-200
-
-
Kelman, Z.1
O'Donnell, M.2
-
18
-
-
0043244877
-
Darst structure and function of the transcription elongation tactor GreB bound to bacterial RNA polymerase
-
Opalka N., Chlenov M., Chacon P., Rice W.J., Wriggers W., Seth A. Darst structure and function of the transcription elongation tactor GreB bound to bacterial RNA polymerase. Cell 2003, 114:335-345.
-
(2003)
Cell
, vol.114
, pp. 335-345
-
-
Opalka, N.1
Chlenov, M.2
Chacon, P.3
Rice, W.J.4
Wriggers, W.5
Seth, A.6
-
19
-
-
44249091644
-
Termination factor Rho and its cofactors NusA and NusG silence foreign DNA in E. coli
-
Cardinale C.J., Washburn R.S., Tadigotla V.R., Brown L.M., Gottesman M.E., Nudler E. Termination factor Rho and its cofactors NusA and NusG silence foreign DNA in E. coli. Science 2008, 320:935-938.
-
(2008)
Science
, vol.320
, pp. 935-938
-
-
Cardinale, C.J.1
Washburn, R.S.2
Tadigotla, V.R.3
Brown, L.M.4
Gottesman, M.E.5
Nudler, E.6
-
20
-
-
0031039351
-
Negative regulation of l-arabinose metabolism in Bacillus subtilis: characterization of the araR (araC) gene
-
Sá-Nogueira I., Mota L.J. Negative regulation of l-arabinose metabolism in Bacillus subtilis: characterization of the araR (araC) gene. J. Bacteriol. 1997, 179:1598-1608.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 1598-1608
-
-
Sá-Nogueira, I.1
Mota, L.J.2
-
21
-
-
0035702148
-
Bacterial phosphotransferase system (PTS) in carbohydrate uptake and control of carbon metabolism
-
Kotrba P., Inui M., Yukawa H. Bacterial phosphotransferase system (PTS) in carbohydrate uptake and control of carbon metabolism. J. Biosci. Bioeng. 2001, 92:502-517.
-
(2001)
J. Biosci. Bioeng.
, vol.92
, pp. 502-517
-
-
Kotrba, P.1
Inui, M.2
Yukawa, H.3
-
22
-
-
0030299812
-
13C nuclear magnetic resonance analysis of glucose and citrate end products in an ldhL-ldhD double-knockout strain of Lactobacillus plantarum
-
13C nuclear magnetic resonance analysis of glucose and citrate end products in an ldhL-ldhD double-knockout strain of Lactobacillus plantarum. J. Bacteriol. 1996, 178:7311-7315.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 7311-7315
-
-
Ferain, T.1
Schanck, A.N.2
Delcour, J.3
-
23
-
-
0034651753
-
YidC, the Escherichia coli homologue of mitochondrial Oxa1p, is a component of the Sec translocase
-
Scotti P.A., Urbanus M.L., Brunner J., de Gier J.W., von Heijne G., van der Does C., Driessen A.J., Oudega B., Luirink J. YidC, the Escherichia coli homologue of mitochondrial Oxa1p, is a component of the Sec translocase. EMBO J. 2000, 19:542-549.
-
(2000)
EMBO J.
, vol.19
, pp. 542-549
-
-
Scotti, P.A.1
Urbanus, M.L.2
Brunner, J.3
de Gier, J.W.4
von Heijne, G.5
van der Does, C.6
Driessen, A.J.7
Oudega, B.8
Luirink, J.9
-
24
-
-
33747012649
-
Lactobacillus plantarum gene clusters encoding putative cell-surface protein complexes for carbohydrate utilization are conserved in specific Gram-positive bacteria
-
Siezen R., Boekhorst J., Muscariello L., Molenaar D., Renckens B., Kleerebezem M. Lactobacillus plantarum gene clusters encoding putative cell-surface protein complexes for carbohydrate utilization are conserved in specific Gram-positive bacteria. BMC Genomics 2006, 7:126.
-
(2006)
BMC Genomics
, vol.7
, pp. 126
-
-
Siezen, R.1
Boekhorst, J.2
Muscariello, L.3
Molenaar, D.4
Renckens, B.5
Kleerebezem, M.6
-
25
-
-
33846926952
-
C-terminal WxL domain mediates cell wall binding in Enterococcus faecalis and other Gram-positive bacteria
-
Brinster S., Furlan S., Serro P. C-terminal WxL domain mediates cell wall binding in Enterococcus faecalis and other Gram-positive bacteria. J. Bacteriol. 2007, 189:1244-1253.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 1244-1253
-
-
Brinster, S.1
Furlan, S.2
Serro, P.3
-
26
-
-
0035919670
-
Complete genome sequence of a virulent isolate of Streptococcus pneumoniae
-
Tettelin H., Nelson K.E., Paulsen I.T., Eisen J.A., Read T.D., Peterson S., Heidelberg J., DeBoy R.T., Haft D.H., Dodson R.J., Durkin A.S., Gwinn M., Kolonay J.F., Nelson W.C., Peterson J.D., Umayam L.A., White O., Salzberg S.L., Lewis M.R., Radune D., Holtzapple Erik, Khouri Hoda, Wolf Alex M., Utterback T.R., Hansen C.L., McDonald L.A., Feldblyum T.V., Angiuoli S., Dickinson T., Hickey E.K., Holt I.E., Loftus B.J., Yang F., Smith H.O., Venter J.C., Dougherty B.A., Morrison D.A., Hollingshead S.K., Fraser C.M. Complete genome sequence of a virulent isolate of Streptococcus pneumoniae. Science 2001, 293:498-506.
-
(2001)
Science
, vol.293
, pp. 498-506
-
-
Tettelin, H.1
Nelson, K.E.2
Paulsen, I.T.3
Eisen, J.A.4
Read, T.D.5
Peterson, S.6
Heidelberg, J.7
DeBoy, R.T.8
Haft, D.H.9
Dodson, R.J.10
Durkin, A.S.11
Gwinn, M.12
Kolonay, J.F.13
Nelson, W.C.14
Peterson, J.D.15
Umayam, L.A.16
White, O.17
Salzberg, S.L.18
Lewis, M.R.19
Radune, D.20
Holtzapple, E.21
Khouri, H.22
Wolf, A.M.23
Utterback, T.R.24
Hansen, C.L.25
McDonald, L.A.26
Feldblyum, T.V.27
Angiuoli, S.28
Dickinson, T.29
Hickey, E.K.30
Holt, I.E.31
Loftus, B.J.32
Yang, F.33
Smith, H.O.34
Venter, J.C.35
Dougherty, B.A.36
Morrison, D.A.37
Hollingshead, S.K.38
Fraser, C.M.39
more..
-
27
-
-
34547151297
-
The VicRK system of Streptococcus mutans responds to oxidative stress
-
Deng D.M., Liu M.J., ten Cate J.M., Crielaard W. The VicRK system of Streptococcus mutans responds to oxidative stress. J. Dent. Res. 2007, 86:606-610.
-
(2007)
J. Dent. Res.
, vol.86
, pp. 606-610
-
-
Deng, D.M.1
Liu, M.J.2
ten Cate, J.M.3
Crielaard, W.4
-
28
-
-
80052529234
-
The Pho regulon and the pathogenesis of Escherichia coli
-
Crépin S., Chekabab S.M., Le Bihan G., Bertrand N., Dozois C.M., Harel J. The Pho regulon and the pathogenesis of Escherichia coli. Vet. Microbiol. 2011, 153:82-88.
-
(2011)
Vet. Microbiol.
, vol.153
, pp. 82-88
-
-
Crépin, S.1
Chekabab, S.M.2
Le Bihan, G.3
Bertrand, N.4
Dozois, C.M.5
Harel, J.6
-
29
-
-
0036889030
-
The nitrate reductase and nitrite reductase operons and the narT gene of Staphylococcus carnosus are positively controlled by the novel two-component system NreBC
-
Fedtke I., Kamps A., Krismer B., Götz F. The nitrate reductase and nitrite reductase operons and the narT gene of Staphylococcus carnosus are positively controlled by the novel two-component system NreBC. J. Bacteriol. 2002, 184:6624-6634.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 6624-6634
-
-
Fedtke, I.1
Kamps, A.2
Krismer, B.3
Götz, F.4
-
30
-
-
0037898952
-
Autoinduction and signal transduction in the regulation of staphylococcal virulence
-
Novick R.P. Autoinduction and signal transduction in the regulation of staphylococcal virulence. Mol. Microbiol. 2003, 48:1429-1449.
-
(2003)
Mol. Microbiol.
, vol.48
, pp. 1429-1449
-
-
Novick, R.P.1
-
31
-
-
0022573589
-
Regulation of exoprotein gene expression in Staphylococcus aureus by agar
-
Recsei P. Regulation of exoprotein gene expression in Staphylococcus aureus by agar. Mol. Gen. Genet. 1986, 202:58-61.
-
(1986)
Mol. Gen. Genet.
, vol.202
, pp. 58-61
-
-
Recsei, P.1
-
33
-
-
1942517962
-
Regulation of virulence determinants in Staphylococcus aureus: complexity and applications
-
Bronner S., Monteil H., Prevost G. Regulation of virulence determinants in Staphylococcus aureus: complexity and applications. FEMS Microbiol. Rev. 2004, 28:183-200.
-
(2004)
FEMS Microbiol. Rev.
, vol.28
, pp. 183-200
-
-
Bronner, S.1
Monteil, H.2
Prevost, G.3
-
34
-
-
0031890211
-
+ exchanger 3 accumulates and is functional in recycling endosomes
-
+ exchanger 3 accumulates and is functional in recycling endosomes. J. Biol. Chem. 1998, 273:2035-2043.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 2035-2043
-
-
D'Souza, S.1
Garcia-Cabado, A.2
Yu, F.3
Teter, K.4
Lukacs, G.5
Skorecki, K.6
Moore, H.7
Orlowski, J.8
Grinstein, S.9
-
35
-
-
27944483300
-
Alkaline pH homeostasis in bacteria: new insights
-
Padan E., Bibi E., Ito M., Krulwich T.A. Alkaline pH homeostasis in bacteria: new insights. Biochim. Biophys. Acta Biomembr. 2005, 1717:67-88.
-
(2005)
Biochim. Biophys. Acta Biomembr.
, vol.1717
, pp. 67-88
-
-
Padan, E.1
Bibi, E.2
Ito, M.3
Krulwich, T.A.4
-
36
-
-
0030944438
-
Alkaline stress response in Enterococcus faecalis: adaptation, cross-protection, and changes in protein synthesis
-
Flahaut S., Hartke A., Giard J.C., Auffray Y. Alkaline stress response in Enterococcus faecalis: adaptation, cross-protection, and changes in protein synthesis. Appl. Environ. Microbiol. 1997, 63:812-814.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 812-814
-
-
Flahaut, S.1
Hartke, A.2
Giard, J.C.3
Auffray, Y.4
-
37
-
-
0019475137
-
Manganese, superoxide dismutase, and oxygen tolerance in some lactic acid bacteria
-
Archibald F.S., Fridovich I. Manganese, superoxide dismutase, and oxygen tolerance in some lactic acid bacteria. J. Bacteriol. 1981, 145:442-451.
-
(1981)
J. Bacteriol.
, vol.145
, pp. 442-451
-
-
Archibald, F.S.1
Fridovich, I.2
-
38
-
-
0034734832
-
Comparative genomics of phages and prophages in lactic acid bacteria
-
Desiere F., Pridmore R.D., Brüssow H. Comparative genomics of phages and prophages in lactic acid bacteria. Virology 2000, 275:294-300.
-
(2000)
Virology
, vol.275
, pp. 294-300
-
-
Desiere, F.1
Pridmore, R.D.2
Brüssow, H.3
-
39
-
-
0344982836
-
The prophage sequences of Lactobacillus plantarum strain WCFS1
-
Ventura M., Canchaya C., Kleerebezem M., de Vos W.M., Siezen R.J., Brossow H. The prophage sequences of Lactobacillus plantarum strain WCFS1. Virology 2003, 316:245-255.
-
(2003)
Virology
, vol.316
, pp. 245-255
-
-
Ventura, M.1
Canchaya, C.2
Kleerebezem, M.3
de Vos, W.M.4
Siezen, R.J.5
Brossow, H.6
-
40
-
-
84855865488
-
Complete resequencing and reannotation of the Lactobacillus plantarum WCFS1 genome
-
Siezen R., Francke C., Renckens B., Boekhorst J., Wels M., Kleerebezem M., van Hijum S.A.F.T. Complete resequencing and reannotation of the Lactobacillus plantarum WCFS1 genome. J. Bacteriol. 2012, 194:195-196.
-
(2012)
J. Bacteriol.
, vol.194
, pp. 195-196
-
-
Siezen, R.1
Francke, C.2
Renckens, B.3
Boekhorst, J.4
Wels, M.5
Kleerebezem, M.6
van Hijum, S.A.F.T.7
-
41
-
-
0033485517
-
Improved microbial gene identification with GLIMMER
-
Delcher A.L., Harmon D., Kasif S., White O., Salzberg S.L. Improved microbial gene identification with GLIMMER. Nucleic Acids Res. 1999, 27:4636-4641.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 4636-4641
-
-
Delcher, A.L.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.L.5
-
42
-
-
0037444091
-
ZCURVE: a new system for recognizing protein-coding genes in bacterial and archaeal genomes
-
Guo F.B., Ou H.Y., Zhang C.T. ZCURVE: a new system for recognizing protein-coding genes in bacterial and archaeal genomes. Nucleic Acids Res. 2003, 31:1780-1789.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 1780-1789
-
-
Guo, F.B.1
Ou, H.Y.2
Zhang, C.T.3
-
43
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schäffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
44
-
-
80053345905
-
SignalP 4.0: discriminating signal peptides from transmembrane regions
-
Petersen T.N., Brunak S., von Heijne G., Nielsen H. SignalP 4.0: discriminating signal peptides from transmembrane regions. Nat. Methods 2011, 8:785-786.
-
(2011)
Nat. Methods
, vol.8
, pp. 785-786
-
-
Petersen, T.N.1
Brunak, S.2
von Heijne, G.3
Nielsen, H.4
-
45
-
-
0035910270
-
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
-
Krogh A., Larsson B., von Heijne G., Sonnhammer E.L.L. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 2001, 305:567-580.
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 567-580
-
-
Krogh, A.1
Larsson, B.2
von Heijne, G.3
Sonnhammer, E.L.L.4
-
46
-
-
52449085554
-
Methods for the bioinformatic identification of bacterial lipoproteins encoded in the genomes of Gram-positive bacteria
-
Rahman O., Cummings S.P., Harrington D.J., Sutcliffe I.C. Methods for the bioinformatic identification of bacterial lipoproteins encoded in the genomes of Gram-positive bacteria. World J. Microbiol. Biotechnol. 2008, 24:2377-2382.
-
(2008)
World J. Microbiol. Biotechnol.
, vol.24
, pp. 2377-2382
-
-
Rahman, O.1
Cummings, S.P.2
Harrington, D.J.3
Sutcliffe, I.C.4
-
47
-
-
33644873699
-
IS finder: the reference centre for bacterial insertion sequences
-
Siguier P., Pérochon J., Lestrade L., Mahillon J., Chandler M. IS finder: the reference centre for bacterial insertion sequences. Nucleic Acids Res. 2006, 34:D32-D36.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. D32-D36
-
-
Siguier, P.1
Pérochon, J.2
Lestrade, L.3
Mahillon, J.4
Chandler, M.5
-
49
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
50
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 2003, 52:696-704.
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
|