Application of an in situ fluorometer to determine the distribution of fluorescent organic matter in the open ocean

Marine Chemistry

Volumn 177, Issue , 2015, Pages 298-305

  Yamashita, Y ^a   Lu, C J ^b   Ogawa, H ^b   Nishioka, J ^a   Obata, H ^b   Saito, H ^b  

^a HOKKAIDO UNIVERSITY   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

Author keywords

Dissolved organic matter; Fluorescence; In situ measurements; Sensors; Subtropical North Pacific

Indexed keywords

DISSOLVED ORGANIC MATTER; ENVIRONMENTAL FATE; FILTER; IN SITU MEASUREMENT; MARINE ENVIRONMENT; OPEN OCEAN; STANDARDIZATION; VERTICAL PROFILE;

PACIFIC OCEAN; PACIFIC OCEAN (SUBTROPICAL);

VINDULA ARSINOE;

EID: 84948079011     PISSN: 03044203     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.marchem.2015.06.025     Document Type: Article

References (50)

1. Amon R.M.W., Bud�us G., Meon B. Dissolved organic carbon distribution and origin in the Nordic seas: exchanges with the Arctic Ocean and the North Atlantic. J. Geophys. Res. 2003, 108:3221. 10.1029/2002JC001594.
2. Andrew A.A., Del Vecchio R., Subramaniam A., Blough N.V. Chromophoric dissolved organic matter (CDOM) in the equatorial Atlantic Ocean: optical properties and their relation to CDOM structure and source. Mar. Chem. 2013, 148:33-43.
3. Baker A. Thermal fluorescence quenching properties of dissolved organic matter. Water Res. 2005, 39:4405-4412.
4. Bergamaschi B.A., Krabbenhoft D.P., Aiken G.R., Patino E., Rumbold D.G., Orem W.H. Tidally driven export of dissolved organic carbon, total mercury, and methylmercury from a mangrove-dominated estuary. Environ. Sci. Technol. 2012, 46:1371-1378.
5. Catal� T.S., Reche I., Fuentes-Lema A., Romera-Castillo C., Nieto-Cid M., Ortega-Retuerta E., Calvo E., �lvarez M., Marras� C., Stedmon C.A., �lvarez-Salgado X.A. Turnover time of fluorescent dissolved organic matter in the dark global ocean. Nat. Commun. 2015, 6:5986.
6. Chen R.F., Bada J.L. The fluorescence of dissolved organic matter in seawater. Mar. Chem. 1992, 37:191-221.
7. Chen R.F., Gardner G.F. High-resolution measurements of chromophoric dissolved organic matter in the Mississippi and Atchafalaya River plume regions. Mar. Chem. 2004, 89:103-125.
8. Chen R.F., Zhang Y., Vlahos P., Rudnick S.M. The fluorescence of dissolved organic matter in the mid-Atlantic Bight. Deep-Sea Res. II 2002, 49:4439-4459.
9. Coble P.G. Marine optical biogeochemistry: the chemistry of ocean color. Chem. Rev. 2007, 107:402-418.
10. Coble P.G., Spencer R.G.M., Baker A., Reynolds D.M. Aquatic organic matter fluorescence. Aquatic organic matter fluorescence 2014, 75-122. Cambridge University Press, New York. P.G. Coble, J. Lead, A. Baker, D.A. Reynolds, R.G.M. Spencer (Eds.).
11. Conmy R.N., Coble P.G., Del Castillo C.E. Calibration and performance of a new in situ multi-channel fluorometer for measurement of colored dissolved organic matter in the ocean. Cont. Shelf Res. 2004, 24:431-442.
12. Conmy R.N., Del Castillo C.E., Downing B.D., Chen R.F. Experimental design and quality assurance: in situ fluorescence instrumentation. Aquatic organic matter fluorescence 2014, 190-230. Cambridge University Press, New York. P.G. Coble, J. Lead, A. Baker, D.A. Reynolds, R.G.M. Spencer (Eds.).
13. Cooper L.W., Benner R., McClelland J.W., Peterson B.J., Holmes R.M., Raymond P.A., Hansell D.A., Grebmeier J.M., Codispoti L.A. Linkages among runoff, dissolved organic carbon, and the stable oxygen isotope composition of seawater and other water mass indicators in the Arctic Ocean. J. Geophys. Res. 2005, 110:G02013. 10.1029/2005JG000031.
14. Cory R.M., Miller M.P., McKnight D.M., Guerard J.J., Miller P.L. Effect of instrument-specific response on the analysis of fulvic acid fluorescence spectra. Limnol. Oceanogr. Methods 2010, 8:67-78.
15. De La Fuente P., Marras� C., Canepa A., �lvarez-Salgado X.A., Gasser M., Fajar N.M., Romera-Castillo C., Pelegr� J.L. Does a general relationship exist between fluorescent dissolved organic matter and microbial respiration? - the case of the dark equatorial Atlantic Ocean. Deep-Sea Res. I 2014, 89:44-55.
16. Downing B.D., Pellerin B.A., Bergamaschi B.A., Saraceno J.F., Kraus T.E.C. Seeing the light: The effects of particles, dissolved materials, and temperature on in situ measurements of DOM fluorescence in rivers and streams. Limnol. Oceanogr. Methods 2012, 10:767-775.
17. Guay C.K., Klinkhammer G.K., Falkner K.K., Benner R., Coble P.G., Whitledge T.E., Black B., Bussell F.J., Wagner T.A. High-resolution measurements of dissolved organic carbon in the Arctic Ocean by in situ fiber-optic spectrometry. Geophys. Res. Lett. 1999, 26:1007-1010.
18. Gu�guen C., McLaughlin F.A., Carmack E.C., Itoh M., Narita H., Nishino S. The nature of colored dissolved organic matter in the southern Canada Basin and East Siberian Sea. Deep-Sea Res. II 2012, 81-84:102-113.
19. Hayase K., Tsubota H., Sunada I., Goda S., Yamazaki H. Vertical distribution of fluorescent organic matter in the North Pacific. Mar. Chem. 1988, 25:373-381.
20. Helms J.R., Stubbin A., Perdue E.M., Green N.W., Chen H., Mopper K. Photochemical bleaching of oceanic dissolved organic matter and its effect on absorption spectral slope and fluorescence. Mar. Chem. 2013, 155:81-91.
21. Jaff� R., Cawley K.M., Yamashita Y. Applications of excitation emission matrix fluorescence with parallel factor analysis (EEM-PARAFAC) in assessing environmental dynamics of natural dissolved organic matter (DOM) in aquatic environments: a review. Advances in the physicochemical characterization of dissolved organic matter: impact on natural and engineered systems 2014, 27-73. ACS Publications. F. Rosario-Ortiz (Ed.).
22. J�rgensen L., Stedmon C.A., Kragh T., Markager S., Middelboe M., S�ndergaard M. Global trends in the fluorescence characteristics and distribution of marine dissolved organic matter. Mar. Chem. 2011, 126:139-148.
23. J�rgensen L., Stedmon C.A., Granskog M.A., Middelboe M. Tracing the long-term microbial production of recalcitrant fluorescent dissolved organic matter in seawater. Geophys. Res. Lett. 2014, 41:2481-2488. 10.1002/2014GL059428.
24. Klinkhammer G.P. Fiber optic spectrometers for in-situ measurements in the oceans: the ZAPS probe. Mar. Chem. 1994, 47:13-20.
25. Klinkhammer G.P., Chin C.S., Wilso C., Rudnicki M.D., German C.R. Distributions of dissolved manganese and fluorescent dissolved organic matter in the Columbia River estuary and plume as determined by in situ measurement. Mar. Chem. 1997, 56:1-14.
26. Klinkhammer G.P., McManus J., Colbert D., Rudnicki M.D. Behavior of terrestrial dissolved organic matter at the continent-ocean boundary from high-resolution distributions. Geochim. Cosmochim. Acta 2000, 64:2765-2774.
27. Kowalczuk P., Zabłocka M., Sagan S., Kuliński K. Fluorescence measured in situ as a proxy of CDOM absorption and DOC concentration in the Baltic Sea. Oceanologia 2010, 52:431-471.
28. Nelson N.B., Siegel D.A. Chromophoric DOM in the open ocean. Biogeochemistry of marine dissolved organic matter 2002, 547-578. Academic Press, San Diego. D.A. Hansell, C.A. Carlson (Eds.).
29. Nelson N.B., Carlson C.A., Steinberg D.K. Production of chromophoric dissolved organic matter by Sargasso Sea microbes. Mar. Chem. 2004, 89:273-287.
30. Nelson N.B., Siegel D.A., Carlson C.A., Swan C.M., Smethie W.M., Khatiwala S. Hydrography of chromophoric dissolved organic matter in the North Atlantic. Deep-Sea Res. I 2007, 54:710-731.
31. Nelson N.B., Siegel D.A., Carlson C.A., Swan C.M. Tracing global biogeochemical cycles and meridional overturning circulation using chromophoric dissolved organic matter. Geophys. Res. Lett. 2010, 37:L03610. 10.1029/2009GL042325.
32. Osburn C.L., Del Vecchio R., Boyd T.J. Physicochemical effects on dissolved organic matter fluorescence in natural waters. Aquatic organic matter fluorescence 2014, 233-277. Cambridge University Press, New York. P.G. Coble, J. Lead, A. Baker, D.A. Reynolds, R.G.M. Spencer (Eds.).
33. Pellerin B.A., Saraceno J.F., Shanley J.B., Sebestyen S.D., Aiken G.R., Wollheim W.M., Bergamaschi B.A. Taking the pulse of snowmelt: in situ sensors reveal seasonal, event and diurnal patterns of nitrate and dissolved organic matter variability in an upland forest stream. Biogeochemistry 2011, 108:1-16.
34. Proctor C.W., Roesler C.S. New insights on obtaining phytoplankton concentration and composition from in situ multispectral chlorophyll fluorescence. Limnol. Oceanogr. Methods 2010, 8:695-708.
35. Romera-Castillo C., Sarmento H., �lvarez-Salgado X.A., Gasol J.M., Marras� C. Net production and consumption of fluorescent colored dissolved organic matter by natural bacterial assemblages growing on marine phytoplankton exudates. Appl. Environ. Microbiol. 2011, 77:7490-7498.
36. Saraceno J.F., Pellerin B.A., Downing B.D., Boss E., Bachand P.A.M., Bergamaschi B.A. High-frequency in situ optical measurements during a storm event: assessing relationships between dissolved organic matter, sediment concentrations, and hydrologic processes. J. Geophys. Res. 2009, 114:G00F09. 10.1029/2009JG000989.
37. Senesi N. Molecular and quantitative aspects of the chemistry of fulvic acid and its interactions with metal ions and organic chemicals. Part II. The fluorescence spectroscopy approach. Anal. Chim. Acta 1990, 232:77-106.
38. Shimotori K., Watanabe K., Hamaa T. Fluorescence characteristics of humic-like fluorescent dissolved organic matter produced by various taxa of marine bacteria. Aquat. Microb. Ecol. 2012, 65:249-260.
39. Siegel D.A., Maritorena S., Nelson N.B., Hansell D.A., Lorenzi-Kayser M. Global distribution and dynamics of colored dissolved and detrital organic materials. J. Geophys. Res. 2002, 107:3228. 10.1029/2001JC000965.
40. Spencer R.G.M., Pellerin B.A., Bergamaschi B.A., Downing B.D., Kraus T.E.C., Smart D.R., Dahlgren R.A., Hernes P.J. Diurnal variability in riverine dissolved organic matter composition determined by in situ optical measurement in the San Joaquin River (California, USA). Hydrol. Process. 2007, 21:3181-3189.
41. Stedmon C.A., �lvarez-Salgado X.A. Shedding light on a black box: UV-visible spectroscopic characterization of marine dissolved organic matter. Microbial carbon pump in the ocean 2011, 62-63. American Association for the Advancement of Science. N. Jiao, F. Azam, S. Sanders (Eds.).
42. Tanaka K., Kuma K., Hamasaki K., Yamashita Y. Accumulation of humic-like fluorescent dissolved organic matter in the Japan Sea. Sci. Rep. 2014, 4:5292.
43. Tani H., Nishioka J., Kuma K., Takata H., Yamashita Y., Tanoue E., Midorikaw T. Iron(III) hydroxide solubility and humic-type fluorescent organic matter in the deep water column of the Okhotsk Sea and the northwestern North Pacific Ocean. Deep-Sea Res. I 2003, 50:1063-1078.
44. Watras C.J., Hanson P.C., Stacy T.L., Morrison K.M., Mather J., Hu Y.-H., Milewski P. A temperature compensation method for CDOM fluorescence sensors in freshwater. Limnol. Oceanogr. Methods 2011, 9:296-301.
45. Xing X., Morel A., Claustre H., D'Ortenzio F., Poteau A. Combined processing and mutual interpretation of radiometry and fluorometry from autonomous profiling Bio-Argo floats: 2. Colored dissolved organic matter absorption retrieval. J. Geophys. Res. 2012, 117:C04022. 10.1029/2011JC007632.
46. Yamashita Y., Tanoue E. In situ production of chromophoric dissolved organic matter in coastal environments. Geophys. Res. Lett. 2004, 31:L14302. 10.1029/2004GL019734.
47. Yamashita Y., Tanoue E. Production of bio-refractory fluorescent dissolved organic matter in the ocean interior. Nat. Geosci. 2008, 1:579-582.
48. Yamashita Y., Tanoue E. Basin scale distribution of chromophoric dissolved organic matter in the Pacific Ocean. Limnol. Oceanogr. 2009, 54(2):598-609.
49. Yamashita Y., Cory R.M., Nishioka J., Kuma K., Tanoue E., Jaff� R. Fluorescence characteristics of dissolved organic matter in the deep waters of the Okhotsk Sea and the northwestern North Pacific Ocean. Deep-Sea Res. II 2010, 57:1478-1485.
50. Yamashita Y., Nosaka Y., Suzuki K., Ogawa H., Takahashi K., Saito H. Photobleaching as a factor controlling spectral characteristics of chromophoric dissolved organic matter in open ocean. Biogeosciences 2013, 10:7207-7217.