Metagenomic diagnostics for the simultaneous detection of multiple pathogens in human stool specimens from Côte d'Ivoire: A proof-of-concept study

Infection, Genetics and Evolution

Volumn 40, Issue , 2016, Pages 389-397

  Schneeberger, Pierre H H ^a,b,c,d   Becker, Sören L ^c,d,e   Pothier, Joël F ^f   Duffy, Brion ^f   N'Goran, Eliézer K ^g,h   Beuret, Christian ^b   Frey, Jürg E ^a   Utzinger, Jürg ^c,d  

^a AGROSCOPE   (Switzerland)

^b SPIEZ LABORATORY   (Switzerland)

^c SWISS TROPICAL AND PUBLIC HEALTH INSTITUTE   (Switzerland)

^d UNIVERSITY OF BASEL   (Switzerland)

^e SAARLAND UNIVERSITY   (Germany)

^f ZURICH UNIVERSITY OF APPLIED SCIENCES   (Switzerland)

^g UNIVERSITÉ FÉLIX HOUPHOUËT BOIGNY   (Côte d’Ivoire)

^h CENTRE SUISSE DE RECHERCHES SCIENTIFIQUES EN CÔTE D'IVOIRE   (Côte d’Ivoire)

Author keywords

Bacterial strain typing; C te d'Ivoire; Diarrhea; Metagenomics; Pathobiome; Resistome

Indexed keywords

ADULT; ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL LOAD; CASE REPORT; CHILD; CONTROLLED STUDY; COTE D'IVOIRE; DIARRHEA; DRUG DATABASE; FECES ANALYSIS; FEMALE; GENETIC MARKER; HELMINTH; HOST PATHOGEN INTERACTION; HUMAN; INTERMETHOD COMPARISON; INTESTINE FLORA; MALE; METAGENOMICS; MICROBIAL DIVERSITY; MICROSCOPY; MULTIPLEX POLYMERASE CHAIN REACTION; NONHUMAN; NUCLEIC ACID DATABASE; PATHOGEN LOAD; PRESCHOOL CHILD; PRIORITY JOURNAL; PROTOZOAL INFECTION; SCHOOL CHILD; SCREENING TEST; SPECIES COMPOSITION; ADOLESCENT; BIOLOGY; COMORBIDITY; FECES; INFANT; METAGENOME; MICROBIOLOGY; PARASITOLOGY; PROCEDURES; REPRODUCIBILITY; STANDARDS; VIROLOGY; YOUNG ADULT;

ANTIINFECTIVE AGENT;

ADOLESCENT; ADULT; ANTI-INFECTIVE AGENTS; CHILD; CHILD, PRESCHOOL; COMORBIDITY; COMPUTATIONAL BIOLOGY; COTE D'IVOIRE; DIARRHEA; DRUG RESISTANCE, MICROBIAL; FECES; FEMALE; HUMANS; INFANT; MALE; METAGENOME; METAGENOMICS; REPRODUCIBILITY OF RESULTS; YOUNG ADULT;

EID: 84947718692     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2015.08.044     Document Type: Article

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