IL-1A rs1800587, IL-1B rs1143634 and IL-1R1 rs2234650 polymorphisms in Iranian patients with systemic sclerosis

International Journal of Immunogenetics

Volumn 42, Issue 6, 2015, Pages 423-427

  Abtahi, S ^a   Farazmand, A ^a   Mahmoudi, M ^b   Ashraf Ganjouei, A ^b   Javinani, A ^b   Nazari, B ^b   Kavosi, H ^b   Amirzargar, A A ^c   Jamshidi, A R ^b   Gharibdoost, F ^b  

^a UNIVERSITY OF TEHRAN   (Iran)

^b TEHRAN UNIVERSITY OF MEDICAL SCIENCES   (Iran)

^c TEHRAN UNIVERSITY OF MEDICAL SCIENCES   (Iran)

Author keywords

[No Author keywords available]

Indexed keywords

INTERLEUKIN 1 RECEPTOR TYPE I; INTERLEUKIN 1ALPHA; INTERLEUKIN 1BETA;

ADULT; ARTICLE; BLOOD SAMPLING; CLINICAL EVALUATION; CONTROLLED STUDY; FEMALE; GENE; GENE CLUSTER; GENE FREQUENCY; GENETIC ASSOCIATION; GENETIC SUSCEPTIBILITY; GENOTYPE; HAPLOTYPE; HUMAN; IRANIAN (CITIZEN); MAJOR CLINICAL STUDY; MALE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM; SYSTEMIC SCLEROSIS; ALLELE; CASE CONTROL STUDY; GENETIC ASSOCIATION STUDY; GENETIC PREDISPOSITION; GENETICS; IMMUNOLOGY; IRAN; ODDS RATIO; SCLERODERMA, SYSTEMIC;

ALLELES; CASE-CONTROL STUDIES; FEMALE; GENE FREQUENCY; GENETIC ASSOCIATION STUDIES; GENETIC PREDISPOSITION TO DISEASE; GENOTYPE; HAPLOTYPES; HUMANS; INTERLEUKIN-1ALPHA; INTERLEUKIN-1BETA; IRAN; MALE; ODDS RATIO; POLYMORPHISM, SINGLE NUCLEOTIDE; RECEPTORS, INTERLEUKIN-1 TYPE I; SCLERODERMA, SYSTEMIC;

EID: 84947019090     PISSN: 17443121     EISSN: 1744313X     Source Type: Journal    
DOI: 10.1111/iji.12212     Document Type: Article

References (24)

1. Alfonse, T.M. and Subcommittee for Scleroderma Criteria of the American Rheumatism Association Diagnostic and Therapeutic Criteria Committee (1980) Preliminary criteria for the classification of systemic sclerosis (scleroderma). Arthritis and Rheumatism, 23, 581.
2. Arend, W.P. & Guthridge, C.J. (2000) Biological role of interleukin 1 receptor antagonist isoforms. Annals of the Rheumatic Diseases, 59(Suppl 1), i60.
3. Barnett, R. & Larson, G. (2012) A phenol-chloroform protocol for extracting DNA from ancient samples. Methods in Molecular Biology, 840, 13.
4. Benjamini, Y. & Hochberg, Y. (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society, Series B, 1, 298.
5. Beretta, L., Cappiello, F., Moore, J.H., Barili, M., Greene, C.S. & Scorza, R. (2008) Ability of epistatic interactions of cytokine single-nucleotide polymorphisms to predict susceptibility to disease subsets in systemic sclerosis patients. Arthritis and Rheumatism, 59, 974.
6. Berkman, N., Jose, P.J., Williams, T.J., Schall, T.J., Barnes, P.J. & Chung, K.F. (1995) Corticosteroid inhibition of macrophage inflammatory protein-1 alpha in human monocytes and alveolar macrophages. American Journal of Physiology, 269, L443.
7. Chen, X., El Gazzar, M., Yoza, B.K. & McCall, C.E. (2009) The NF-kappaB factor RelB and histone H3 lysine methyltransferase G9a directly interact to generate epigenetic silencing in endotoxin tolerance. Journal of Biological Chemistry, 284, 27857.
8. Chifflot, H., Fautrel, B., Sordet, C., Chatelus, E. & Sibilia, J. (2008) Incidence and prevalence of systemic sclerosis: a systematic literature review. Seminars in Arthritis and Rheumatism, 37, 223.
9. Cox, A., Camp, N.J., Nicklin, M.J., di Giovine, F.S. & Duff, G.W. (1998) An analysis of linkage disequilibrium in the interleukin-1 gene cluster, using a novel grouping method for multiallelic markers. American Journal of Human Genetics, 62, 1180.
10. Daryabor, G., Mahmoudi, M., Jamshidi, A., Nourijelyani, K., Amirzargar, A., Ahmadzadeh, N., Farhadi, E. & Nicknam, M.H. (2014) Determination of IL-23 receptor gene polymorphism in Iranian patients with ankylosing spondylitis. European Cytokine Network, 25, 24.
11. Dominici, R., Malferrari, G., Mariani, C., Grimaldi, L. & Biunno, I. (2002) The Interleukin 1-beta exonic (+3953) polymorphism does not alter in vitro protein secretion. Experimental and Molecular Pathology, 73, 139.
12. Hutyrova, B., Lukac, J., Bosak, V., Buc, M., du Bois, R. & Petrek, M. (2004) Interleukin 1alpha single-nucleotide polymorphism associated with systemic sclerosis. Journal of Rheumatology, 31, 81.
13. Kawaguchi, Y., Tochimoto, A., Ichikawa, N., Harigai, M., Hara, M., Kotake, S., Kitamura, Y. & Kamatani, N. (2003) Association of IL1A gene polymorphisms with susceptibility to and severity of systemic sclerosis in the Japanese population. Arthritis and Rheumatism, 48, 186.
14. Khanna, D., Seibold, J.R., Wells, A., Distler, O., Allanore, Y., Denton, C. & Furst, D.E. (2010) Systemic sclerosis-associated interstitial lung disease: lessons from clinical trials, outcome measures, and future study design. Current Rheumatology Reviews, 6, 138.
15. Kochl, S., Niederstatter, H. & Parson, W. (2005) DNA extraction and quantitation of forensic samples using the phenol-chloroform method and real-time PCR. Methods in Molecular Biology, 297, 13.
16. Li, Z., Zhang, Z., He, Z., Tang, W., Li, T., Zeng, Z., He, L. & Shi, Y. (2009) A partition-ligation-combination-subdivision EM algorithm for haplotype inference with multiallelic markers. Cell Research, 19, 519.
17. Luheshi, N.M., Rothwell, N.J. & Brough, D. (2009) Dual functionality of interleukin-1 family cytokines: implications for anti-interleukin-1 therapy. British Journal of Pharmacology, 157, 1318.
18. Maricq, H.R., Weinrich, M.C., Keil, J.E., Smith, E.A., Harper, F.E., Nussbaum, A.I., LeRoy, E.C., McGregor, A.R., Diat, F. & Rosal, E.J. (1989) Prevalence of scleroderma spectrum disorders in the general population of South Carolina. Arthritis and Rheumatism, 32, 998.
19. Mattuzzi, S., Barbi, S., Carletto, A., Ravagnani, V., Moore, P.S., Bambara, L.M. & Scarpa, A. (2007) Association of polymorphisms in the IL1B and IL2 genes with susceptibility and severity of systemic sclerosis. Journal of Rheumatology, 34, 997.
20. McDowell, T.L., Symons, J.A., Ploski, R., Forre, O. & Duff, G.W. (1995) A genetic association between juvenile rheumatoid arthritis and a novel interleukin-1 alpha polymorphism. Arthritis and Rheumatism, 38, 221.
21. Pociot, F., Molvig, J., Wogensen, L., Worsaae, H. & Nerup, J. (1992) A TaqI polymorphism in the human interleukin-1 beta (IL-1 beta) gene correlates with IL-1 beta secretion in vitro. European Journal of Clinical Investigation, 22, 396.
22. Risbud, M.V. & Shapiro, I.M. (2014) Role of cytokines in intervertebral disc degeneration: pain and disc content. Nature Reviews Rheumatology, 10, 44.
23. Shi, Y.Y. & He, L. (2005) SHEsis, a powerful software platform for analyses of linkage disequilibrium, haplotype construction, and genetic association at polymorphism loci. Cell Research, 15, 97.
24. Whitfield, M.L., Finlay, D.R., Murray, J.I., Troyanskaya, O.G., Chi, J.T., Pergamenschikov, A., McCalmont, T.H., Brown, P.O., Botstein, D. & Connolly, M.K. (2003) Systemic and cell type-specific gene expression patterns in scleroderma skin. Proceedings of the National Academy of Sciences of the USA, 100, 12319.