-
1
-
-
77952424242
-
A pipeline for high throughput detection and mapping of SNPs from EST databases
-
COI: 1:CAS:528:DC%2BC3cXmtFWisbw%3D, PID: 20502512
-
Anithakumari A, Tang J, van Eck HJ, Visser RG, Leunissen JA, Vosman B, van der Linden CG (2010) A pipeline for high throughput detection and mapping of SNPs from EST databases. Mol Breed 26:65–75
-
(2010)
Mol Breed
, vol.26
, pp. 65-75
-
-
Anithakumari, A.1
Tang, J.2
van Eck, H.J.3
Visser, R.G.4
Leunissen, J.A.5
Vosman, B.6
van der Linden, C.G.7
-
2
-
-
54449098752
-
Rapid SNP discovery and genetic mapping using sequenced RAD markers
-
PID: 18852878
-
Baird NA, Etter PD, Atwood TS, Currey MC, Shiver AL, Lewis ZA, Selker EU, Cresko WA, Johnson EA (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One 3(10):e3376
-
(2008)
PLoS One
, vol.3
, Issue.10
, pp. e3376
-
-
Baird, N.A.1
Etter, P.D.2
Atwood, T.S.3
Currey, M.C.4
Shiver, A.L.5
Lewis, Z.A.6
Selker, E.U.7
Cresko, W.A.8
Johnson, E.A.9
-
3
-
-
34548128406
-
SNP discovery via 454 transcriptome sequencing
-
COI: 1:CAS:528:DC%2BD2sXhtVKmurfL, PID: 17662031
-
Barbazuk WB, Emrich SJ, Chen HD, Li L, Schnable PS (2007) SNP discovery via 454 transcriptome sequencing. Plant J 51:910–918
-
(2007)
Plant J
, vol.51
, pp. 910-918
-
-
Barbazuk, W.B.1
Emrich, S.J.2
Chen, H.D.3
Li, L.4
Schnable, P.S.5
-
4
-
-
28244474931
-
Utilisation of the commonwealth potato collection in potato breeding
-
Bradshaw J, Ramsay G (2005) Utilisation of the commonwealth potato collection in potato breeding. Euphytica 146(1–2):9–19
-
(2005)
Euphytica
, vol.146
, Issue.1-2
, pp. 9-19
-
-
Bradshaw, J.1
Ramsay, G.2
-
5
-
-
64749112341
-
Targeted single nucleotide polymorphism (SNP) discovery in a highly polyploid plant species using 454 sequencing
-
COI: 1:CAS:528:DC%2BD1MXlvFOitLg%3D, PID: 19386042
-
Bundock PC, Eliott FG, Ablett G, Benson AD, Casu RE, Aitken KS, Henry RJ (2009) Targeted single nucleotide polymorphism (SNP) discovery in a highly polyploid plant species using 454 sequencing. Plant Biotechnol J 7:347–354
-
(2009)
Plant Biotechnol J
, vol.7
, pp. 347-354
-
-
Bundock, P.C.1
Eliott, F.G.2
Ablett, G.3
Benson, A.D.4
Casu, R.E.5
Aitken, K.S.6
Henry, R.J.7
-
6
-
-
42149113457
-
Association mapping of quality traits in potato (Solanum tuberosum L.)
-
D’hoop B, Paulo MJ, Mank RA, van Eck HJ, van Eeuwijk FA (2008) Association mapping of quality traits in potato (Solanum tuberosum L.). Euphytica 161:47–60
-
(2008)
Euphytica
, vol.161
, pp. 47-60
-
-
D’hoop, B.1
Paulo, M.J.2
Mank, R.A.3
van Eck, H.J.4
van Eeuwijk, F.A.5
-
7
-
-
79957883348
-
Phenotypic analyses of multi-environment data for two diverse tetraploid potato collections: comparing an academic panel with an industrial panel
-
D’hoop B, Paulo MJ, Visser RGF, van Eck HJ, van Eeuwijk FA (2011) Phenotypic analyses of multi-environment data for two diverse tetraploid potato collections: comparing an academic panel with an industrial panel. Potato Res 54:157–181
-
(2011)
Potato Res
, vol.54
, pp. 157-181
-
-
D’hoop, B.1
Paulo, M.J.2
Visser, R.G.F.3
van Eck, H.J.4
van Eeuwijk, F.A.5
-
8
-
-
84907878465
-
Identification of agronomically important QTL in tetraploid potato cultivars using a marker–trait association analysis
-
PID: 24408376
-
D’hoop B, Keizer PC, Paulo MJ, Visser RGF, van Eeuwijk F, van Eck H (2014) Identification of agronomically important QTL in tetraploid potato cultivars using a marker–trait association analysis. Theor Appl Genet 127(3):731–748
-
(2014)
Theor Appl Genet
, vol.127
, Issue.3
, pp. 731-748
-
-
D’hoop, B.1
Keizer, P.C.2
Paulo, M.J.3
Visser, R.G.F.4
van Eeuwijk, F.5
van Eck, H.6
-
9
-
-
0030484057
-
Assessment of potato breeding progress in the USA over the last century
-
Douches D, Maas D, Jastrzebski K, Chase R (1996) Assessment of potato breeding progress in the USA over the last century. Crop Sci 36:1544–1552
-
(1996)
Crop Sci
, vol.36
, pp. 1544-1552
-
-
Douches, D.1
Maas, D.2
Jastrzebski, K.3
Chase, R.4
-
10
-
-
84860442706
-
Integration of two diploid potato linkage maps with the potato genome sequence
-
COI: 1:CAS:528:DC%2BC38Xnt1Cruro%3D, PID: 22558443
-
Felcher KJ, Coombs JJ, Massa AN, Hansey CN, Hamilton JP, Veilleux RE, Buell CR, Douches DS (2012) Integration of two diploid potato linkage maps with the potato genome sequence. PLoS One 7:e36347
-
(2012)
PLoS One
, vol.7
, pp. e36347
-
-
Felcher, K.J.1
Coombs, J.J.2
Massa, A.N.3
Hansey, C.N.4
Hamilton, J.P.5
Veilleux, R.E.6
Buell, C.R.7
Douches, D.S.8
-
11
-
-
84877979569
-
Linkage analysis and QTL mapping using SNP dosage data in a tetraploid potato mapping population
-
PID: 23704960
-
Hackett CA, McLean K, Bryan GJ (2013) Linkage analysis and QTL mapping using SNP dosage data in a tetraploid potato mapping population. PLoS One 8:e63939
-
(2013)
PLoS One
, vol.8
, pp. e63939
-
-
Hackett, C.A.1
McLean, K.2
Bryan, G.J.3
-
12
-
-
79958071911
-
Single nucleotide polymorphism discovery in elite north american potato germplasm
-
COI: 1:CAS:528:DC%2BC3MXnvVSit70%3D
-
Hamilton JP, Hansey CN, Whitty BR, Stoffel K, Massa AN, Van Deynze A, De Jong WS, Douches DS, Buell CR (2011) Single nucleotide polymorphism discovery in elite north american potato germplasm. BMC Genom 12:302
-
(2011)
BMC Genom
, vol.12
, pp. 302
-
-
Hamilton, J.P.1
Hansey, C.N.2
Whitty, B.R.3
Stoffel, K.4
Massa, A.N.5
Van Deynze, A.6
De Jong, W.S.7
Douches, D.S.8
Buell, C.R.9
-
13
-
-
84863681911
-
Single nucleotide polymorphism discovery in cultivated tomato via sequencing by synthesis
-
COI: 1:CAS:528:DC%2BC38XmvVKqt7o%3D
-
Hamilton JP, Sim S-C, Stoffel K, Van Deynze A, Buell CR, Francis DM (2012) Single nucleotide polymorphism discovery in cultivated tomato via sequencing by synthesis. Plant Genome 5:17–29
-
(2012)
Plant Genome
, vol.5
, pp. 17-29
-
-
Hamilton, J.P.1
Sim, S.-C.2
Stoffel, K.3
Van Deynze, A.4
Buell, C.R.5
Francis, D.M.6
-
14
-
-
0027139513
-
The early history of the potato in Europe
-
Hawkes JG, Francisco-Ortega J (1993) The early history of the potato in Europe. Euphytica 70:1–7
-
(1993)
Euphytica
, vol.70
, pp. 1-7
-
-
Hawkes, J.G.1
Francisco-Ortega, J.2
-
15
-
-
84883229068
-
Retrospective view of North American potato (Solanum tuberosum L.) breeding in the 20th and 21st centuries
-
PID: 23589519
-
Hirsch CN, Hirsch CD, Felcher K, Coombs J, Zarka D, Van Deynze A, De Jong W, Veilleux RE, Jansky S, Bethke P (2013) Retrospective view of North American potato (Solanum tuberosum L.) breeding in the 20th and 21st centuries. Genes| Genomes| Genet 3:1003–1013
-
(2013)
Genes| Genomes| Genet
, vol.3
, pp. 1003-1013
-
-
Hirsch, C.N.1
Hirsch, C.D.2
Felcher, K.3
Coombs, J.4
Zarka, D.5
Van Deynze, A.6
De Jong, W.7
Veilleux, R.E.8
Jansky, S.9
Bethke, P.10
-
16
-
-
34548016343
-
Recombination and linkage disequilibrium in Arabidopsis thaliana
-
COI: 1:CAS:528:DC%2BD2sXps12gtbY%3D, PID: 17676040
-
Kim S, Plagnol V, Hu TT, Toomajian C, Clark RM, Ossowski S, Ecker JR, Weigel D, Nordborg M (2007) Recombination and linkage disequilibrium in Arabidopsis thaliana. Nat Genet 39:1151–1155
-
(2007)
Nat Genet
, vol.39
, pp. 1151-1155
-
-
Kim, S.1
Plagnol, V.2
Hu, T.T.3
Toomajian, C.4
Clark, R.M.5
Ossowski, S.6
Ecker, J.R.7
Weigel, D.8
Nordborg, M.9
-
17
-
-
84855206867
-
Towards F1 hybrid seed potato breeding
-
Lindhout P, Meijer D, Schotte T, Hutten RB, Visser RGF, van Eck H (2011) Towards F1 hybrid seed potato breeding. Potato Res 54(4):301–312
-
(2011)
Potato Res
, vol.54
, Issue.4
, pp. 301-312
-
-
Lindhout, P.1
Meijer, D.2
Schotte, T.3
Hutten, R.B.4
Visser, R.G.F.5
van Eck, H.6
-
18
-
-
84902270076
-
Phenotypic stability and genome-wide association study of late blight resistance in potato genotypes adapted to the tropical highlands
-
PID: 24423400
-
Lindqvist-Kreuze H, Gastelo M, Perez W, Forbes GA, de Koeyer D, Bonierbale M (2014) Phenotypic stability and genome-wide association study of late blight resistance in potato genotypes adapted to the tropical highlands. Phytopathology 104:624–633
-
(2014)
Phytopathology
, vol.104
, pp. 624-633
-
-
Lindqvist-Kreuze, H.1
Gastelo, M.2
Perez, W.3
Forbes, G.A.4
de Koeyer, D.5
Bonierbale, M.6
-
21
-
-
84907161139
-
Allelic variation in genes contributing to glycoalkaloid biosynthesis in a diploid interspecific population of potato
-
COI: 1:CAS:528:DC%2BC3sXhsleltrbL, PID: 24190104
-
Manrique-Carpintero N, Tokuhisa J, Ginzberg I, Veilleux R (2014) Allelic variation in genes contributing to glycoalkaloid biosynthesis in a diploid interspecific population of potato. Theor Appl Genet 127(2):391–405
-
(2014)
Theor Appl Genet
, vol.127
, Issue.2
, pp. 391-405
-
-
Manrique-Carpintero, N.1
Tokuhisa, J.2
Ginzberg, I.3
Veilleux, R.4
-
22
-
-
77955293622
-
Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data
-
COI: 1:STN:280:DC%2BC3c3osFSmtQ%3D%3D, PID: 20157694
-
Moragues M, Comadran J, Waugh R, Milne I, Flavell A, Russell JR (2010) Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theor Appl Genet 120:1525–1534
-
(2010)
Theor Appl Genet
, vol.120
, pp. 1525-1534
-
-
Moragues, M.1
Comadran, J.2
Waugh, R.3
Milne, I.4
Flavell, A.5
Russell, J.R.6
-
23
-
-
79960422847
-
Genome sequence and analysis of the tuber crop potato
-
PGSC—Potato Genome Sequencing Consortium (2011) Genome sequence and analysis of the tuber crop potato. Nature 475(7355):189–195
-
(2011)
Nature
, vol.475
, Issue.7355
, pp. 189-195
-
-
PGSC—Potato Genome Sequencing Consortium1
-
24
-
-
84919773613
-
Construction of a dense SNP map of a highly heterozygous diploid potato population and QTL analysis of tuber shape and eye depth
-
PID: 25159608
-
Prashar A, Hornyik C, Young V, McLean K, Sharma S, Dale MF, Bryan G (2014) Construction of a dense SNP map of a highly heterozygous diploid potato population and QTL analysis of tuber shape and eye depth. Theor Appl Genet 127:2159–2171
-
(2014)
Theor Appl Genet
, vol.127
, pp. 2159-2171
-
-
Prashar, A.1
Hornyik, C.2
Young, V.3
McLean, K.4
Sharma, S.5
Dale, M.F.6
Bryan, G.7
-
26
-
-
84889019837
-
Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps
-
PID: 24062527
-
Sharma SK, Bolser D, de Boer J, Sønderkær M, Amoros W, Carboni MF, Amoros JM, de la Cruz G, Di Genova A, Douches DS, Eguiluz M, Guo X, Guzman F, Hackett CA, Hamilton JP, Li G, Li Y, Lozano R, Maass A, Marshall D, Martinez D, McLean K, Mejía N, Milne L, Munive S, Nagy I, Ponce O, Ramirez M, Simon R, Thomson SJ, Torres Y, Waugh R, Zhang Z, Huang S, Visser RGF, Bachem CWB, Sagredo B, Feingold SE, Orjeda G, Veilleux RE, Bonierbale M, Jacobs JME, Milbourne D, Martin DMA, Bryan GJ (2013) Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps. Genes| Genomes| Genet 3(11):2031–2047
-
(2013)
Genes| Genomes| Genet
, vol.3
, Issue.11
, pp. 2031-2047
-
-
Sharma, S.K.1
Bolser, D.2
de Boer, J.3
Sønderkær, M.4
Amoros, W.5
Carboni, M.F.6
Amoros, J.M.7
de la Cruz, G.8
Di Genova, A.9
Douches, D.S.10
Eguiluz, M.11
Guo, X.12
Guzman, F.13
Hackett, C.A.14
Hamilton, J.P.15
Li, G.16
Li, Y.17
Lozano, R.18
Maass, A.19
Marshall, D.20
Martinez, D.21
McLean, K.22
Mejía, N.23
Milne, L.24
Munive, S.25
Nagy, I.26
Ponce, O.27
Ramirez, M.28
Simon, R.29
Thomson, S.J.30
Torres, Y.31
Waugh, R.32
Zhang, Z.33
Huang, S.34
Visser, R.G.F.35
Bachem, C.W.B.36
Sagredo, B.37
Feingold, S.E.38
Orjeda, G.39
Veilleux, R.E.40
Bonierbale, M.41
Jacobs, J.M.E.42
Milbourne, D.43
Martin, D.M.A.44
Bryan, G.J.45
more..
-
27
-
-
84907810155
-
Identification of elite potato genotypes possessing multiple disease resistance genes through molecular approaches
-
COI: 1:CAS:528:DC%2BC2cXhsF2murnJ
-
Sharma R, Bhardwaj V, Dalamu D, Kaushik SK, Singh BP, Sharma S, Umamaheshwari R, Baswaraj R, Kumar V, Gebhardt C (2014) Identification of elite potato genotypes possessing multiple disease resistance genes through molecular approaches. Sci Hortic 179:204–211
-
(2014)
Sci Hortic
, vol.179
, pp. 204-211
-
-
Sharma, R.1
Bhardwaj, V.2
Dalamu, D.3
Kaushik, S.K.4
Singh, B.P.5
Sharma, S.6
Umamaheshwari, R.7
Baswaraj, R.8
Kumar, V.9
Gebhardt, C.10
-
28
-
-
84863672047
-
Development of a large SNP genotyping array and generation of high-density genetic maps in tomato
-
COI: 1:CAS:528:DC%2BC38XhtVGmtrjI, PID: 22802968
-
Sim S-C, Durstewitz G, Plieske J, Wieseke R, Ganal MW, Van Deynze A, Hamilton JP, Buell CR, Causse M, Wijeratne S (2012) Development of a large SNP genotyping array and generation of high-density genetic maps in tomato. PLoS One 7:e40563
-
(2012)
PLoS One
, vol.7
, pp. e40563
-
-
Sim, S.-C.1
Durstewitz, G.2
Plieske, J.3
Wieseke, R.4
Ganal, M.W.5
Van Deynze, A.6
Hamilton, J.P.7
Buell, C.R.8
Causse, M.9
Wijeratne, S.10
-
29
-
-
84859160576
-
High-throughput single nucleotide polymorphism genotyping for breeding applications in rice using the BeadXpress platform
-
COI: 1:CAS:528:DC%2BC38XkvFylsb8%3D
-
Thomson M, Zhao K, Wright M, McNally K, Rey J, Tung C-W, Reynolds A, Scheffler B, Eizenga G, McClung A, Kim H, Ismail A, de Ocampo M, Mojica C, Reveche MY, Dilla-Ermita C, Mauleon R, Leung H, Bustamante C, McCouch S (2012) High-throughput single nucleotide polymorphism genotyping for breeding applications in rice using the BeadXpress platform. Mol Breed 29(4):875–886
-
(2012)
Mol Breed
, vol.29
, Issue.4
, pp. 875-886
-
-
Thomson, M.1
Zhao, K.2
Wright, M.3
McNally, K.4
Rey, J.5
Tung, C.-W.6
Reynolds, A.7
Scheffler, B.8
Eizenga, G.9
McClung, A.10
Kim, H.11
Ismail, A.12
de Ocampo, M.13
Mojica, C.14
Reveche, M.Y.15
Dilla-Ermita, C.16
Mauleon, R.17
Leung, H.18
Bustamante, C.19
McCouch, S.20
more..
-
30
-
-
0005920811
-
Reflections on the origin of new physiologic races in Phytophthora infestans and the breeding for resistance in potatoes
-
Toxopeus HJ (1956) Reflections on the origin of new physiologic races in Phytophthora infestans and the breeding for resistance in potatoes. Euphytica 5:221–237
-
(1956)
Euphytica
, vol.5
, pp. 221-237
-
-
Toxopeus, H.J.1
-
31
-
-
64749090107
-
Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing
-
COI: 1:CAS:528:DC%2BD1MXlvFOitLs%3D, PID: 19207216
-
Trick M, Long Y, Meng J, Bancroft I (2009) Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing. Plant Biotechnol J 7:334–346
-
(2009)
Plant Biotechnol J
, vol.7
, pp. 334-346
-
-
Trick, M.1
Long, Y.2
Meng, J.3
Bancroft, I.4
-
32
-
-
84877268772
-
A next-generation sequencing method for genotyping-by-sequencing of highly heterozygous autotetraploid potato
-
COI: 1:CAS:528:DC%2BC3sXnvVyisL0%3D, PID: 23667470
-
Uitdewilligen JG, Wolters A-MA, Bjorn B, Borm TJ, Visser RG, van Eck HJ (2013) A next-generation sequencing method for genotyping-by-sequencing of highly heterozygous autotetraploid potato. PLoS One 8:e62355
-
(2013)
PLoS One
, vol.8
, pp. e62355
-
-
Uitdewilligen, J.G.1
Wolters, A.-M.A.2
Bjorn, B.3
Borm, T.J.4
Visser, R.G.5
van Eck, H.J.6
-
34
-
-
77950021720
-
Genetic diversity trends in twentieth century crop cultivars: a meta analysis
-
PID: 20054521
-
van de Wouw M, van Hintum T, Kik C, van Treuren R, Visser B (2010) Genetic diversity trends in twentieth century crop cultivars: a meta analysis. Theor Appl Genet 120:1241–1252
-
(2010)
Theor Appl Genet
, vol.120
, pp. 1241-1252
-
-
van de Wouw, M.1
van Hintum, T.2
Kik, C.3
van Treuren, R.4
Visser, B.5
-
35
-
-
79956025063
-
Genotype calling in tetraploid species from bi-allelic marker data using mixture models
-
Voorrips R, Gort G, Vosman B (2011) Genotype calling in tetraploid species from bi-allelic marker data using mixture models. BMC Bioinform 12:172
-
(2011)
BMC Bioinform
, vol.12
, pp. 172
-
-
Voorrips, R.1
Gort, G.2
Vosman, B.3
-
36
-
-
84904727598
-
Characterization of polyploid wheat genomic diversity using a high density 90,000 single nucleotide polymorphism array
-
COI: 1:CAS:528:DC%2BC2cXht1Wmsr%2FI, PID: 24646323
-
Wang S, Wong D, Forrest K, Allen A, Chao S, Huang BE, Maccaferri M, Salvi S, Milner SG, Cattivelli L (2014) Characterization of polyploid wheat genomic diversity using a high density 90,000 single nucleotide polymorphism array. Plant Biotechnol J 12(6):787–796
-
(2014)
Plant Biotechnol J
, vol.12
, Issue.6
, pp. 787-796
-
-
Wang, S.1
Wong, D.2
Forrest, K.3
Allen, A.4
Chao, S.5
Huang, B.E.6
Maccaferri, M.7
Salvi, S.8
Milner, S.G.9
Cattivelli, L.10
-
37
-
-
77951217695
-
Fine definition of the pedigree haplotypes of closely related rice cultivars by means of genome-wide discovery of single-nucleotide polymorphisms
-
Yamamoto T, Nagasaki H, Yonemaru J-i, Ebana K, Nakajima M, Shibaya T, Yano M (2010) Fine definition of the pedigree haplotypes of closely related rice cultivars by means of genome-wide discovery of single-nucleotide polymorphisms. BMC Genom 11(1):267
-
(2010)
BMC Genom
, vol.11
, Issue.1
, pp. 267
-
-
Yamamoto, T.1
Nagasaki, H.2
Yonemaru, J.-I.3
Ebana, K.4
Nakajima, M.5
Shibaya, T.6
Yano, M.7
|