-
1
-
-
37349012161
-
QTL mapping of yield, agronomic and quality traits in tetraploid potato (Solanum tuberosum subsp. tuberosum)
-
Bradshaw JE, Hackett CA, Pande B, Waugh R, Bryan GJ, (2008) QTL mapping of yield, agronomic and quality traits in tetraploid potato (Solanum tuberosum subsp. tuberosum). Theor Appl Genet 116: 193-211.
-
(2008)
Theor Appl Genet
, vol.116
, pp. 193-211
-
-
Bradshaw, J.E.1
Hackett, C.A.2
Pande, B.3
Waugh, R.4
Bryan, G.J.5
-
2
-
-
78651073544
-
QTL mapping of internal heat necrosis in tetraploid potato
-
McCord PH, Sosinski BR, Haynes KG, Clough ME, Yencho GC, (2011) QTL mapping of internal heat necrosis in tetraploid potato. Theor Appl Genet 122: 129-142.
-
(2011)
Theor Appl Genet
, vol.122
, pp. 129-142
-
-
McCord, P.H.1
Sosinski, B.R.2
Haynes, K.G.3
Clough, M.E.4
Yencho, G.C.5
-
3
-
-
26944446969
-
An expressed sequence tag SSR map of tetraploid alfalfa (Nedieago sativa L.)
-
Sledge MK, Ray IM, Jiang G, (2005) An expressed sequence tag SSR map of tetraploid alfalfa (Nedieago sativa L.). Theor Appl Genet 111: 980-992.
-
(2005)
Theor Appl Genet
, vol.111
, pp. 980-992
-
-
Sledge, M.K.1
Ray, I.M.2
Jiang, G.3
-
4
-
-
33847256495
-
Genetic mapping of biomass production in tetraploid alfalfa (Medicago sativa L.)
-
Robins JG, Luth D, Campbell TA, Bauchan GR, He C, et al. (2007) Genetic mapping of biomass production in tetraploid alfalfa (Medicago sativa L.). Crop Sci 47: 1-10.
-
(2007)
Crop Sci
, vol.47
, pp. 1-10
-
-
Robins, J.G.1
Luth, D.2
Campbell, T.A.3
Bauchan, G.R.4
He, C.5
-
5
-
-
84856728049
-
High-resolution melting analysis for SNP genotyping and mapping in tetraploid alfalfa (Medicago sativa L.)
-
Han YH, Khu DM, Monteros MJ, (2012) High-resolution melting analysis for SNP genotyping and mapping in tetraploid alfalfa (Medicago sativa L.). Mol Breed 29: 489-501.
-
(2012)
Mol Breed
, vol.29
, pp. 489-501
-
-
Han, Y.H.1
Khu, D.M.2
Monteros, M.J.3
-
6
-
-
80052291629
-
Construction of a simple sequence repeat marker-based genetic linkage map in the autotetraploid forage grass Dactylis glomerata L
-
Song Y, Liu F, Zhu Z, Tan L, Fu Y, et al. (2011) Construction of a simple sequence repeat marker-based genetic linkage map in the autotetraploid forage grass Dactylis glomerata L. Grass Sci 57: 158-167.
-
(2011)
Grass Sci
, vol.57
, pp. 158-167
-
-
Song, Y.1
Liu, F.2
Zhu, Z.3
Tan, L.4
Fu, Y.5
-
7
-
-
34547135685
-
A genetic map of tetraploid Paspalum notatum Flügge (bahiagrass) based on single-dose molecular markers
-
Stein J, Pessino SC, Martinez EJ, Rodriguez MP, Siena LA, et al. (2007) A genetic map of tetraploid Paspalum notatum Flügge (bahiagrass) based on single-dose molecular markers. Mol Breed 20: 153-166.
-
(2007)
Mol Breed
, vol.20
, pp. 153-166
-
-
Stein, J.1
Pessino, S.C.2
Martinez, E.J.3
Rodriguez, M.P.4
Siena, L.A.5
-
8
-
-
79957598239
-
An autotetraploid linkage map of rose (Rosa hybrida) validated using the strawberry (Fragaria vesca) genome sequence
-
doi:10.1371/journal.pone.0020463
-
Gar O, Sargent DJ, Tsai C-J, Pleban T, Shalev G, et al. (2011) An autotetraploid linkage map of rose (Rosa hybrida) validated using the strawberry (Fragaria vesca) genome sequence. PLoS ONE 6: e20463 doi:10.1371/journal.pone.0020463.
-
(2011)
PLoS ONE
, vol.6
-
-
Gar, O.1
Sargent, D.J.2
Tsai, C.-J.3
Pleban, T.4
Shalev, G.5
-
9
-
-
54449098752
-
Rapid SNP discovery and genetic mapping using sequenced RAD markers
-
doi:10.1371/journal.pone.0003376
-
Baird NA, Etter PD, Atwood TS, Currey MC, Shiver AL, et al. (2008) Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS ONE 3: e3376 doi:10.1371/journal.pone.0003376.
-
(2008)
PLoS ONE
, vol.3
-
-
Baird, N.A.1
Etter, P.D.2
Atwood, T.S.3
Currey, M.C.4
Shiver, A.L.5
-
10
-
-
79955783956
-
A robust, simple genotyping-by-sequencing approach for high diversity species
-
doi:10.1371/journal.pone.0019379
-
Elshire RJ, Glaubitz JC, Sun Q, Poland JE, Kawamoto K, et al. (2011) A robust, simple genotyping-by-sequencing approach for high diversity species. PLoS ONE 6: e19379 doi:10.1371/journal.pone.0019379.
-
(2011)
PLoS ONE
, vol.6
-
-
Elshire, R.J.1
Glaubitz, J.C.2
Sun, Q.3
Poland, J.E.4
Kawamoto, K.5
-
11
-
-
79956025063
-
Genotype calling in tetraploid species from bi-allelic marker data using mixture models
-
Voorrips RE, Gort G, Vosman B, (2011) Genotype calling in tetraploid species from bi-allelic marker data using mixture models. BMC Bioinformatics 12: 172.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 172
-
-
Voorrips, R.E.1
Gort, G.2
Vosman, B.3
-
12
-
-
84857184500
-
Efficient exact maximum a posterior computation for Bayesian SNP genotyping in polyploids
-
Serang O, Mollinari M, Garcia AAF, (2012) Efficient exact maximum a posterior computation for Bayesian SNP genotyping in polyploids. PLoS ONE 7: e30906.
-
(2012)
PLoS ONE
, vol.7
-
-
Serang, O.1
Mollinari, M.2
Garcia, A.A.F.3
-
13
-
-
0035099904
-
Construction of a genetic linkage map in tetraploid species using molecular markers
-
Luo ZW, Hackett CA, Bradshaw JE, McNicol JW, Milbourne DM, (2001) Construction of a genetic linkage map in tetraploid species using molecular markers. Genetics 157: 1369-1385.
-
(2001)
Genetics
, vol.157
, pp. 1369-1385
-
-
Luo, Z.W.1
Hackett, C.A.2
Bradshaw, J.E.3
McNicol, J.W.4
Milbourne, D.M.5
-
14
-
-
0035692256
-
Interval mapping of QTLs in autotetraploid species
-
Hackett CA, Bradshaw JE, McNicol JW, (2001) Interval mapping of QTLs in autotetraploid species. Genetics 159: 1819-1832.
-
(2001)
Genetics
, vol.159
, pp. 1819-1832
-
-
Hackett, C.A.1
Bradshaw, J.E.2
McNicol, J.W.3
-
15
-
-
0031657515
-
Linkage analysis in tetraploid potato and association of markers with quantitative resistance to late blight (Phytophthora infestans)
-
Meyer RC, Milbourne DM, Hackett CA, Bradshaw JE, McNicol JW, et al. (1998) Linkage analysis in tetraploid potato and association of markers with quantitative resistance to late blight (Phytophthora infestans). Mol Gen Genet 259: 150-160.
-
(1998)
Mol Gen Genet
, vol.259
, pp. 150-160
-
-
Meyer, R.C.1
Milbourne, D.M.2
Hackett, C.A.3
Bradshaw, J.E.4
McNicol, J.W.5
-
16
-
-
8544249196
-
Interval mapping of quantitative trait loci for resistance to late blight [Phytophthora infestans (Mont.) de Bary], height and maturity in a tetraploid population of potato (Solanum tuberosum subsp tuberosum)
-
Bradshaw JE, Pande B, Bryan GJ, Hackett CA, McLean K, et al. (2004) Interval mapping of quantitative trait loci for resistance to late blight [Phytophthora infestans (Mont.) de Bary], height and maturity in a tetraploid population of potato (Solanum tuberosum subsp tuberosum). Genetics 168: 983-995.
-
(2004)
Genetics
, vol.168
, pp. 983-995
-
-
Bradshaw, J.E.1
Pande, B.2
Bryan, G.J.3
Hackett, C.A.4
McLean, K.5
-
17
-
-
4444350575
-
Genetical dissection of H3-mediated polygenic PCN resistance in a heterozygous autotetraploid potato population
-
Bryan GJ, McLean K, Pande B, Purvis A, Hackett CA, et al. (2004) Genetical dissection of H3-mediated polygenic PCN resistance in a heterozygous autotetraploid potato population. Mol Breed 14: 105-116.
-
(2004)
Mol Breed
, vol.14
, pp. 105-116
-
-
Bryan, G.J.1
McLean, K.2
Pande, B.3
Purvis, A.4
Hackett, C.A.5
-
18
-
-
84860442706
-
Integration of two diploid potato linkage maps with the potato genome sequence
-
doi:10.1371/journal.pone.0036347
-
Felcher KJ, Coombs JJ, Massa AN, Hansey CN, Hamilton JP, et al. (2012) Integration of two diploid potato linkage maps with the potato genome sequence. PLoS ONE 7: e36347 doi: 10.1371/journal.pone.0036347.
-
(2012)
PLoS ONE
, vol.7
-
-
Felcher, K.J.1
Coombs, J.J.2
Massa, A.N.3
Hansey, C.N.4
Hamilton, J.P.5
-
19
-
-
0031873153
-
Linkage analysis in tetraploid species: a simulation study
-
Hackett CA, Bradshaw JE, Meyer RC, McNicol JW, Milbourne D, et al. (1998) Linkage analysis in tetraploid species: a simulation study. Genet Res 71: 143-154.
-
(1998)
Genet Res
, vol.71
, pp. 143-154
-
-
Hackett, C.A.1
Bradshaw, J.E.2
Meyer, R.C.3
McNicol, J.W.4
Milbourne, D.5
-
20
-
-
0031853175
-
Identification of AFLP and SSR markers associated with quantitative resistance to Globodera pallida (Stone) in tetraploid potato (Solanum tuberosum subsp. tuberosum) with a view to marker-assisted selection
-
Bradshaw JE, Meyer RC, Milbourne D, McNicol JW, Phillips MS, et al. (1998) Identification of AFLP and SSR markers associated with quantitative resistance to Globodera pallida (Stone) in tetraploid potato (Solanum tuberosum subsp. tuberosum) with a view to marker-assisted selection. Theor Appl Genet 97: 202-210.
-
(1998)
Theor Appl Genet
, vol.97
, pp. 202-210
-
-
Bradshaw, J.E.1
Meyer, R.C.2
Milbourne, D.3
McNicol, J.W.4
Phillips, M.S.5
-
21
-
-
4544320602
-
Dissection and analysis of quantitative disease resistance in tetraploid potato
-
Bradshaw JE, Bryan GJ, Hackett CA, McLean K, Pande B, et al. (2004) Dissection and analysis of quantitative disease resistance in tetraploid potato. Euphytica 137: 13-18.
-
(2004)
Euphytica
, vol.137
, pp. 13-18
-
-
Bradshaw, J.E.1
Bryan, G.J.2
Hackett, C.A.3
McLean, K.4
Pande, B.5
-
22
-
-
54949156063
-
Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios
-
doi:10.1186/1471-2105-9-409
-
Staaf J, Vallon-Christersson J, Lindgren D, Juliusson G, Rosenquist R, et al. (2008) Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios. BMC Bioinformatics 9doi:10.1186/1471-2105-9-409.
-
(2008)
BMC Bioinformatics
, vol.9
-
-
Staaf, J.1
Vallon-Christersson, J.2
Lindgren, D.3
Juliusson, G.4
Rosenquist, R.5
-
23
-
-
84936916896
-
Robust locally-weighted regression and smoothing scatterplots
-
Cleveland WS, (1979) Robust locally-weighted regression and smoothing scatterplots. J Am Stat Ass 74: 829-836.
-
(1979)
J Am Stat Ass
, vol.74
, pp. 829-836
-
-
Cleveland, W.S.1
-
24
-
-
0001204533
-
A general mixture model for mapping quantitative trait loci by using molecular markers
-
Jansen RC, (1992) A general mixture model for mapping quantitative trait loci by using molecular markers. Theor Appl Genet 85: 252-260.
-
(1992)
Theor Appl Genet
, vol.85
, pp. 252-260
-
-
Jansen, R.C.1
-
25
-
-
0001138328
-
Algorithm AS 136: A K-Means Clustering Algorithm
-
Hartigan JA, Wong MA, (1979) Algorithm AS 136: A K-Means Clustering Algorithm. J Roy Stat Soc C 28: 100-108.
-
(1979)
J Roy Stat Soc C
, vol.28
, pp. 100-108
-
-
Hartigan, J.A.1
Wong, M.A.2
-
26
-
-
0000120766
-
Estimating the dimension of a model
-
Schwarz GE, (1978) Estimating the dimension of a model. Ann Stat 6: 461-464.
-
(1978)
Ann Stat
, vol.6
, pp. 461-464
-
-
Schwarz, G.E.1
-
27
-
-
0027141103
-
Segregation of random amplified polymorphic DNA markers and strategies for molecular mapping in tetraploid alfalfa
-
Yu KF, Pauls KP, (1993) Segregation of random amplified polymorphic DNA markers and strategies for molecular mapping in tetraploid alfalfa. Genome 36: 844-851.
-
(1993)
Genome
, vol.36
, pp. 844-851
-
-
Yu, K.F.1
Pauls, K.P.2
-
29
-
-
7344254829
-
Construction of integrated genetic linkage maps by means of a new computer package: JOINMAP
-
Stam P, (1993) Construction of integrated genetic linkage maps by means of a new computer package: JOINMAP. Plant J 3: 729-744.
-
(1993)
Plant J
, vol.3
, pp. 729-744
-
-
Stam, P.1
-
30
-
-
0024610919
-
A tutorial on Hidden Markov Models and selected applications in speech recognition
-
Rabiner LR, (1989) A tutorial on Hidden Markov Models and selected applications in speech recognition. Proceedings of the IEEE 77: 257-286.
-
(1989)
Proceedings of the IEEE
, vol.77
, pp. 257-286
-
-
Rabiner, L.R.1
-
34
-
-
79960422847
-
Genome sequence and analysis of the tuber crop potato
-
The Potato Genome Sequencing Consortium
-
The Potato Genome Sequencing Consortium (2011) Genome sequence and analysis of the tuber crop potato. Nature 475: 189-197.
-
(2011)
Nature
, vol.475
, pp. 189-197
-
-
-
35
-
-
0002041185
-
Reductional and equational separation of the chromosomes in bivalents and multivalents
-
Mather K, (1935) Reductional and equational separation of the chromosomes in bivalents and multivalents. J Genet 30: 53-78.
-
(1935)
J Genet
, vol.30
, pp. 53-78
-
-
Mather, K.1
-
36
-
-
0001325094
-
Segregation and linkage in autotetraploids
-
Mather K, (1936) Segregation and linkage in autotetraploids. J Genet 32: 287-314.
-
(1936)
J Genet
, vol.32
, pp. 287-314
-
-
Mather, K.1
-
37
-
-
84855290008
-
BeadArray expression analysis using Bioconductor
-
Ritchie ME, Dunning MJ, Smith ML, Shi W, Lynch AG, (2011) BeadArray expression analysis using Bioconductor. PLoS Comp Biol 7: e1002276.
-
(2011)
PLoS Comp Biol
, vol.7
-
-
Ritchie, M.E.1
Dunning, M.J.2
Smith, M.L.3
Shi, W.4
Lynch, A.G.5
-
38
-
-
42049089192
-
Statistical issues in the analysis of Illumina data
-
Dunning MJ, Barbosa-Morais NL, Lynch AG, Tavaré S, Ritchie ME, (2012) Statistical issues in the analysis of Illumina data. BMC Bioinformatics 9: 85.
-
(2012)
BMC Bioinformatics
, vol.9
, pp. 85
-
-
Dunning, M.J.1
Barbosa-Morais, N.L.2
Lynch, A.G.3
Tavaré, S.4
Ritchie, M.E.5
-
39
-
-
0030928994
-
Use of allele specificity of comigrating AFLP markers to align genetic maps from different potato genotypes
-
van der Voort JNAMR, van Zandvoort P, van Eck HJ, Folkertsmal RT, Hutten RCB, et al. (1997) Use of allele specificity of comigrating AFLP markers to align genetic maps from different potato genotypes. Mol Gen Genet 255: 438-447.
-
(1997)
Mol Gen Genet
, vol.255
, pp. 438-447
-
-
van der Voort, J.N.A.M.R.1
van Zandvoort, P.2
van Eck, H.J.3
Folkertsmal, R.T.4
Hutten, R.C.B.5
-
40
-
-
0036932478
-
Mapping QTLs for resistance to the cyst nematode Globodera pallida derived from the wild potato species Solanum vernei
-
Bryan GJ, McLean K, Bradshaw JE, de Jong W, Phillips MS, et al. (2002) Mapping QTLs for resistance to the cyst nematode Globodera pallida derived from the wild potato species Solanum vernei. Theor Appl Genet 105: 68-77.
-
(2002)
Theor Appl Genet
, vol.105
, pp. 68-77
-
-
Bryan, G.J.1
McLean, K.2
Bradshaw, J.E.3
de Jong, W.4
Phillips, M.S.5
-
41
-
-
33745375367
-
Construction of a 10,000-marker ultradense genetic recombination map of potato: Providing a framework for accelerated gene isolation and a genomewide physical map
-
van Os H, Andrzejewski S, Bakker E, Barrena I, Bryan GJ, et al. (2006) Construction of a 10,000-marker ultradense genetic recombination map of potato: Providing a framework for accelerated gene isolation and a genomewide physical map. Genetics 173: 1075-1087.
-
(2006)
Genetics
, vol.173
, pp. 1075-1087
-
-
van Os, H.1
Andrzejewski, S.2
Bakker, E.3
Barrena, I.4
Bryan, G.J.5
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