Effects of hydrostatic pressure on yeasts isolated from deep-sea hydrothermal vents

Research in Microbiology

Volumn 166, Issue 9, 2015, Pages 700-709

  Burgaud, Gaëtan ^a   Hué, Nguyen Thi Minh ^b   Arzur, Danielle ^a   Coton, Monika ^a   Perrier Cornet, Jean Marie ^b   Jebbar, Mohamed ^c,d,e   Barbier, Georges ^a  

^a UNIVERSITÉ DE BREST   (France)

^b UNIVERSITÉ DE BOURGOGNE   (France)

^c UNIVERSITÉ DE BRETAGNE OCCIDENTALE   (France)

^d INSTITUT UNIVERSITAIRE EUROPÉEN DE LA MER   (France)

^e IFREMER   (France)

Author keywords

Dimorphism; Filamentation; Hydrostatic pressure; Marine; Piezotolerance; Yeasts

Indexed keywords

RIBOSOME RNA; SEA WATER;

ADAPTATION; ARTICLE; ASCOMYCETES; BASIDIOMYCETES; BIOSPHERE; DEEP SEA; FUNGAL COMMUNITY; FUNGAL STRAIN; FUNGUS CULTURE; FUNGUS ISOLATION; GENETIC MARKER; HYDROSTATIC PRESSURE; HYDROTHERMAL VENT; NEXT GENERATION SEQUENCING; NONHUMAN; PRIORITY JOURNAL; YEAST; GENETICS; GROWTH, DEVELOPMENT AND AGING; MICROBIOLOGY; PHYSIOLOGICAL STRESS; PHYSIOLOGY; ULTRASTRUCTURE;

ASCOMYCOTA; BASIDIOMYCOTA; HYDROSTATIC PRESSURE; HYDROTHERMAL VENTS; SEAWATER; STRESS, PHYSIOLOGICAL;

EID: 84946484897     PISSN: 09232508     EISSN: 17697123     Source Type: Journal    
DOI: 10.1016/j.resmic.2015.07.005     Document Type: Article

References (48)

1. Abe F. Exploration of the effects of hydrostatic pressure on microbial growth, physiology and survival: perspectives from piezophysiology. Bioscience 2007, 71:2347-2357.
2. Lauro F.M., Bartlett D.H. Prokaryotic lifestyles in deep sea habitats. Extremophiles 2008, 12:15-25.
3. Abe F., Horikoshi K. The biotechnological potential of piezophiles. Trends Biotechnol 2001, 19:102-108.
4. Bartlett D.H. Pressure effects on in vivo microbial processes. Biochimica Biophysica Acta (BBA) Protein Struct Mol Enzym 2002, 1595:367-381.
5. Yayanos A.A. Microbiology to 10,500 meters in the deep sea. Annu Rev Microbiol 1995, 49:777-805.
6. Zeng X., Birrien J.L., Fouquet Y., Jebbar M., Querellou J., Oger P., et al. Pyrococcus CH1, an obligate piezophilic hyperthermophilic: extending the upper temperature pressure-limits for life. ISME J 2009, 3:873-876.
7. Birrien J.L., Zeng X., Jebbar M., Cambon-Bonavita M.A., Querellou J., Oger P., et al. Pyrococcus yayanosii sp. nov., an obligate piezophilic hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent. IJSEM 2011, 61:2827-2881.
8. Takishita K., Tsuchiya M., Reimer J.D., Maruyama T. Molecular evidence basidiomycetous fungus cryptococcus demonstrating the curvatus is the dominant microbial eukaryote in sediment at the Knoll methane seep Kuroshima. Extremophiles 2006, 10:165-169.
9. Lai X., Cao L., Tan H., Fang S., Huang Y., Zhou S. Fungal communities from methane hydrate-bearing deep-sea marine sediments in South China sea. ISME J 2007, 1:756-762.
10. Edgcomb V.P., Beaudoin D., Gast R., Biddle J.F., Teske A. Marine subsurface eukaryotes: the fungal majority. Environ Microbiol 2011, 13:172-183.
11. Ciobanu M.C., Burgaud G., Dufresne A., Bruker A., Rédou V., Ben Maamar S., et al. Microorganisms persist at record depths in the subseafloor of the Canterbury Basin. ISME J 2014, 8:1370-1380.
12. Rédou V., Ciobanu M.C., Pachiadaki M.G., Edgcomb V.P., Alain K., Barbier G., et al. In-depth analyses of deep subsurface sediments using 454-pyrosequencing reveals a reservoir of buried fungal communities. FEMS Microbiol Ecol 2014, 90:908-921.
13. Edgcomb V.P., Kysela D.T., Teske A., de Vera Gomez A., Sogin M.L. Benthic eukaryotic diversity in the Guaymas Basin hydrothermal wind environment. Proc Natl Acad Sci U S A 2002, 99:7658-7662.
14. Lopez-Garcia P., Vereshchaka A., Moreira D. Eukaryotic diversity associated with carbonates and fluid-seawater interface in Lost City hydrothermal field. Environ Microbiol 2007, 9:546-554.
15. Bass D., Howe A., Brown N., Barton H., Demidova M., Michelle H., et al. Yeast forms dominate fungal diversity in the deep oceans. Proc R Soc B 2007, 274:3069-3077.
16. Le Calvez T., Burgaud G., Mahe S., Barbier G., Vandenkoornhuyse P. Fungal diversity in deep sea hydrothermal ecosystems. App Environ Microbiol 2009, 75:6415-6421.
17. Dupont J., Magnin S., Rousseau F., Zbinden M., Freboug G., Samadi S., et al. Molecular and ultrastructural characterization of two ascomycetes found on sunken wood off Vanuatu islands in the deep Pacific ocean. Mycol Res 2009, 113:1351-1364.
18. Takishita K., Yubuki N., Kakizoe N., Inagaki Y., Maruyama T. Diversity of microbial eukaryotes in sediment at a deep-sea methane cold seep: surveys of ribosomal DNA libraries from raw sediment samples and two enrichment cultures. Extremophiles 2007, 11:563-576.
19. Nagahama T., Takahashi E., Nagano Y., Abdel-Wahab M.A., Miyazaki M. Molecular evidence that deep-branching fungi are major fungal components in deep-sea methane cold-seep sediments. Env Microbiol 2011, 13:2359-2370.
20. Alexander E., Stock A., Breiner H.W., Behnke A., Bunge J., Yakimov M.M., et al. Microbial eukaryotes in the hypersaline anoxic L'Atalante deep-sea basin. Env Microbiol 2009, 11:360-381.
21. Edgcomb V.P., Orsi W.D., Leslin C., Epstein S.S., Bunge J., Jeon S., et al. Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern mediterranean sea. Extremophiles 2009, 13:151-167.
22. Stock A., Breiner H.W., Pachiadaki M., Edgcomb V.P., Filker S., La Cono V., et al. Microbial eukaryote life in the new hypersaline deep-sea basin Thetis. Extrem life under extreme Cond 2010, 16:21-34.
23. Orsi W.D., Edgcomb V.P., Christman G.D., Biddle J.F. Gene expression in the deep biosphere. Nature 2013, 499:205-208.
24. Oger P., Jebbar M. The many ways of coping with pressure. Res Microbiol 2010, 161:799-809.
25. Abe F. Stress responses of the yeast Saccharomyces cerevisiae under high hydrostatic pressure. Stress biology of yeasts and fungi 2015, 77-92. H. Takagi, H. Kitagaki (Eds.).
26. Raghukumar C., Raghukumar S. Barotolerance of fungi isolated from deep-sea sediments of the Indian Ocean. Aquat Microb Ecol 1998, 15:153-163.
27. Damare S., Raghukumar C., Muraleedharan U.D., Raghukumar S. Deep-sea fungi as a source of alkaline and cold-tolerant proteases. Enzym Microb Technol 2006, 39:172-181.
28. Lorenz R., Molitoris H. Cultivation of fungi under simulated deep sea conditions. Mycol Res 1997, 101:1355-1365.
29. Burgaud G., Arzur D., Durand L., Cambon-Bonavita M.A., Barbier G. Marine culturable yeasts in deep-sea hydrothermal vents: diversity and association with fauna. FEMS Microbiol Ecol 2010, 73:121-133.
30. Burgaud G., Arzur D., Sampaio J.P., Barbier G. Candida oceani sp. nov., a novel yeast isolated from a Mid-Atlantic Ridge hydrothermal vent (-2300 meters). A Van Leeuw J Microb 2011, 100:75-82.
31. Thiel A., Michaud G., Moalic Y., Flament D., Jebbar M. Genetic manipulations of the hyperthermophilic piezophilic archaeon Thermococcus barophilus. App Environ Microbiol 2014, 80:2299-2306.
32. Abe F. Hydrostatic pressure enhances vital staining with carboxyfluorescein or carboxydichlorofluorescein in Saccharomyces cerevisiae: efficient detection of labeled yeasts by flow cytometry. App Environ Microbiol 1998, 64:1139-1142.
33. Gessner M.O., Bauchrowitz M.A., Escautier M. Extraction and quantification of ergosterol as a measure of fungal biomass in leaf litter. Microb Ecol 1991, 22:285-291.
34. Charcosset J.Y., Chauvet E. Effect of cultivation conditions one year ergosterol as indicator of biomass in the aquatic hyphomycetes. App Environ Microbiol 2001, 67:2051-2055.
35. Deer H., Lücker S., Wagner M. Daime, a novel picture analysis program for microbial ecology and biofilm research. Env Microbiol 2006, 8:200-213.
36. Perrier-Cornet J.M., Marechal P.A., Gervais P. A new design intended to relate high pressure treatment to yeast cells mass transfer. J Biotechnol 1995, 1216:1-10.
37. Yang L., Haagensen J.A.J., Jelsbak L. In situ growth rates and biofilm development of Pseudomonas aeruginosa populations in chronic lung infections. J Bacteriol 2008, 190:2767-2776.
38. Abe F., Horikoshi K. Hydrostatic pressure promotes the acidification of vacuoles in Saccharomyces cerevisiae. FEMS Microbiol Lett 1995, 130:307-312.
39. Picard A., Daniel I., Montagnac G., Oger P. In situ monitoring by quantitative Raman spectroscopy of alcoholic fermentation by Saccharomyces cerevisiae under high pressure. Extremophiles 2007, 11:445-452.
40. Wang S.L., Chen D.J., Deng D.W., Wu X.Z. Effects of high hydrostatic pressure on the growth and β-carotene production of Rhodotorula glutinis. Yeast 2008, 25:251-257.
41. Gadanho M., Sampaio J.P. Occurrence and diversity of yeasts in the Mid-Atlantic Ridge hydrothermal fields near the Azores Archipelago. Microb Ecol 2005, 50:408-417.
42. Deacon J.W. Environmental conditions for growth, and tolerance of extremes. Fungal biology 2005, Blackwell Publishing Ltd., Malden, MA USA. 4th ed.
43. Zobell C.E., Cobet A.B. Filament formation by Escherichia coli at increased hydrostatic pressures. J Bacteriol 1964, 87:710-719.
44. Ishii A., Sato T., Wachi M., Nagai K., Kato C. Effects of high hydrostatic pressure on bacterial cytoskeleton FtsZ polymers in vivo and in vitro. Microbiology 2004, 150:1965-1972.
45. Hornby J., Dumitru R., Nickerson K. High phosphate (up to 600 mM) induces pseudohyphal development in five wild-type Candida albicans. J Microbiol Methods 2004, 56:119-124.
46. Zaragoza O., Gancedo J.M. Pseudohyphal growth is induced in Saccharomyces cerevisiae by a combination of stress and camp signaling. Antonie Leeuwenhoek 2000, 78:187-194.
47. Whiteway M., Bachewich C. Morphogenesis in Candida albicans. Annu Rev Microbiol 2007, 61:529-553.
48. Bachewich C., Thomas D.Y., Whiteway M. Depletion of a polo-like kinase in Candida albicans activates cyclase-dependent hyphal-like growth. Mol Biol Cell 2013, 14:2163-2180.