메뉴 건너뛰기




Volumn 43, Issue D1, 2015, Pages D1117-D1123

CODEX: A next-generation sequencing experiment database for the haematopoietic and embryonic stem cell communities

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOINFORMATICS; CLASSIFIER; CLINICAL DATA REPOSITORY; CODEX; COMMON DATA ELEMENTS; COMPUTER INTERFACE; CONTENT ANALYSIS; DATA EXTRACTION; DATA MINING; ELECTRONIC DATA INTERCHANGE; EMBRYONIC STEM CELL; GENETIC DATABASE; HEMATOPOIETIC STEM CELL; INFORMATION RETRIEVAL; INFORMATION STORAGE; KNOWLEDGE BASE; MEDICAL INFORMATICS; PRIORITY JOURNAL; SEARCH ENGINE; WEB BROWSER; ANIMAL; CHROMATIN IMMUNOPRECIPITATION; COMPUTER PROGRAM; DNA SEQUENCE; GENETICS; HEMATOPOIESIS; HIGH THROUGHPUT SEQUENCING; HUMAN; INTERNET; METABOLISM; MOUSE; SEQUENCE ANALYSIS;

EID: 84946060265     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gku895     Document Type: Article
Times cited : (98)

References (36)
  • 1
    • 71449125977 scopus 로고    scopus 로고
    • Forcing cells to change lineages
    • Graf, T. and Enver, T. (2009) Forcing cells to change lineages. Nature, 462, 587-594.
    • (2009) Nature , vol.462 , pp. 587-594
    • Graf, T.1    Enver, T.2
  • 3
    • 69649084228 scopus 로고    scopus 로고
    • The transcriptional foundation of pluripotency
    • Chambers, I. and Tomlinson, S. R. (2009) The transcriptional foundation of pluripotency. Development, 136, 2311-2322.
    • (2009) Development , vol.136 , pp. 2311-2322
    • Chambers, I.1    Tomlinson, S.R.2
  • 4
    • 84934442657 scopus 로고    scopus 로고
    • Transcriptional regulation of haematopoietic stem cells
    • Wilkinson, A. C. and Gottgens, B. (2013) Transcriptional regulation of haematopoietic stem cells. Adv. Exp. Med. Biol., 786, 187-212.
    • (2013) Adv. Exp. Med. Biol. , vol.786 , pp. 187-212
    • Wilkinson, A.C.1    Gottgens, B.2
  • 5
    • 84896727582 scopus 로고    scopus 로고
    • Heterogeneity and hierarchy of hematopoietic stem cells
    • e72
    • Ema, H., Morita, Y. and Suda, T. (2014) Heterogeneity and hierarchy of hematopoietic stem cells. Exp. Hematol., 42, 74-82; e72.
    • (2014) Exp. Hematol. , vol.42 , pp. 74-82
    • Ema, H.1    Morita, Y.2    Suda, T.3
  • 6
    • 84928275441 scopus 로고    scopus 로고
    • Transcriptional network control of normal and leukaemic haematopoiesis
    • Sive, J. and Gottgens, B. (2014) Transcriptional network control of normal and leukaemic haematopoiesis. Exp. Cell Res., doi:10.1016/j.yexcr.2014.06.021.
    • (2014) Exp. Cell Res.
    • Sive, J.1    Gottgens, B.2
  • 7
    • 84905161795 scopus 로고    scopus 로고
    • The genome-wide molecular signature of transcription factors in leukemia
    • Prange, K. H., Singh, A. A. and Martens, J. H. (2014) The genome-wide molecular signature of transcription factors in leukemia. Exp. Hematol., 42, 637-650.
    • (2014) Exp. Hematol. , vol.42 , pp. 637-650
    • Prange, K.H.1    Singh, A.A.2    Martens, J.H.3
  • 8
    • 53649106195 scopus 로고    scopus 로고
    • Next-generation DNA sequencing
    • Shendure, J. and Ji, H. (2008) Next-generation DNA sequencing. Nat. Biotechnol., 26, 1135-1145.
    • (2008) Nat. Biotechnol. , vol.26 , pp. 1135-1145
    • Shendure, J.1    Ji, H.2
  • 16
    • 84905161795 scopus 로고    scopus 로고
    • The genome-wide molecular signature of transcription factors in leukemia
    • Prange, K. H., Singh, A. A. and Martens, J. H. (2014) The genome-wide molecular signature of transcription factors in leukemia. Exp. Hematol., 42, 637-650.
    • (2014) Exp. Hematol. , vol.42 , pp. 637-650
    • Prange, K.H.1    Singh, A.A.2    Martens, J.H.3
  • 17
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead, B., Trapnell, C., Pop, M. and Salzberg, S. L. (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol., 10, R25.
    • (2009) Genome Biol. , vol.10 , pp. R25
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 23
    • 84876045450 scopus 로고    scopus 로고
    • Gene set control analysis predicts hematopoietic control mechanisms from genome-wide transcription factor binding data
    • e314
    • Joshi, A., Hannah, R., Diamanti, E. and Gottgens, B. (2013) Gene set control analysis predicts hematopoietic control mechanisms from genome-wide transcription factor binding data. Exp. Hematol., 41, 354-366; e314.
    • (2013) Exp. Hematol. , vol.41 , pp. 354-366
    • Joshi, A.1    Hannah, R.2    Diamanti, E.3    Gottgens, B.4
  • 24
    • 77952567987 scopus 로고    scopus 로고
    • Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
    • Heinz, S., Benner, C., Spann, N., Bertolino, E., Lin, Y. C., Laslo, P., Cheng, J. X., Murre, C., Singh, H. and Glass, C. K. (2010) Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. Mol. Cell, 38, 576-589.
    • (2010) Mol. Cell , vol.38 , pp. 576-589
    • Heinz, S.1    Benner, C.2    Spann, N.3    Bertolino, E.4    Lin, Y.C.5    Laslo, P.6    Cheng, J.X.7    Murre, C.8    Singh, H.9    Glass, C.K.10
  • 27
    • 78651303899 scopus 로고    scopus 로고
    • UniPROBE, update 2011: Expanded content and search tools in the online database of protein-binding microarray data on protein-DNA interactions
    • Robasky, K. and Bulyk, M. L. (2011) UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res., 39, D124-D128.
    • (2011) Nucleic Acids Res. , vol.39 , pp. D124-D128
    • Robasky, K.1    Bulyk, M.L.2
  • 32
    • 79955137160 scopus 로고    scopus 로고
    • A compendium of genome-wide hematopoietic transcription factor maps supports the identification of gene regulatory control mechanisms
    • Hannah, R., Joshi, A., Wilson, N. K., Kinston, S. and Gottgens, B. (2011) A compendium of genome-wide hematopoietic transcription factor maps supports the identification of gene regulatory control mechanisms. Exp. Hematol., 39, 531-541.
    • (2011) Exp. Hematol. , vol.39 , pp. 531-541
    • Hannah, R.1    Joshi, A.2    Wilson, N.K.3    Kinston, S.4    Gottgens, B.5
  • 34
    • 84891800330 scopus 로고    scopus 로고
    • BloodChIP: A database of comparative genome-wide transcription factor binding profiles in human blood cells
    • Chacon, D., Beck, D., Perera, D., Wong, J. W. and Pimanda, J. E. (2014) BloodChIP: a database of comparative genome-wide transcription factor binding profiles in human blood cells. Nucleic Acids Res., 42, D172-D177.
    • (2014) Nucleic Acids Res. , vol.42 , pp. D172-D177
    • Chacon, D.1    Beck, D.2    Perera, D.3    Wong, J.W.4    Pimanda, J.E.5
  • 35
    • 79955778027 scopus 로고    scopus 로고
    • Hmchip: A database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data
    • Chen, L., Wu, G. and Ji, H. (2011) hmChIP: a database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data. Bioinformatics, 27, 1447-1448.
    • (2011) Bioinformatics , vol.27 , pp. 1447-1448
    • Chen, L.1    Wu, G.2    Ji, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.