-
1
-
-
84865187909
-
Hierarchical Bayesian models in ecology: reconstructing species interaction networks from non-homogeneous species abundance data
-
Aderhold A., Husmeier D., Lennon J.J., Beale C.M., Smith V.A. Hierarchical Bayesian models in ecology: reconstructing species interaction networks from non-homogeneous species abundance data. Ecol. Inform. 2012, 11:55-64.
-
(2012)
Ecol. Inform.
, vol.11
, pp. 55-64
-
-
Aderhold, A.1
Husmeier, D.2
Lennon, J.J.3
Beale, C.M.4
Smith, V.A.5
-
2
-
-
12344332816
-
Long-term increases in prevalence of North Sea fishes having southern biogeographic affinities
-
Beare D., Burns F., Greig A., Jones E., Peach K., Kienzle M., McKenzie E., Reid D. Long-term increases in prevalence of North Sea fishes having southern biogeographic affinities. Mar. Ecol. Prog. Ser. 2004, 284:269-278.
-
(2004)
Mar. Ecol. Prog. Ser.
, vol.284
, pp. 269-278
-
-
Beare, D.1
Burns, F.2
Greig, A.3
Jones, E.4
Peach, K.5
Kienzle, M.6
McKenzie, E.7
Reid, D.8
-
3
-
-
0842348111
-
A gentle tutorial of the em algorithm and its application to parameter estimation for gaussian mixture and hidden Markov models
-
Bilmes J.A., et al. A gentle tutorial of the em algorithm and its application to parameter estimation for gaussian mixture and hidden Markov models. Int. Comput. Sci. Inst. 1998, 4:126.
-
(1998)
Int. Comput. Sci. Inst.
, vol.4
, pp. 126
-
-
Bilmes, J.A.1
-
4
-
-
17044389816
-
Do climate and fishing influence size-based indicators of Celtic sea fish community structure?
-
Blanchard J.L., Dulvy N.K., Jennings S., Ellis J.R., Pinnegar J.K., Tidd A., Kell L.T. Do climate and fishing influence size-based indicators of Celtic sea fish community structure?. ICES J. Mar. Sci. 2005, 62:405-411.
-
(2005)
ICES J. Mar. Sci.
, vol.62
, pp. 405-411
-
-
Blanchard, J.L.1
Dulvy, N.K.2
Jennings, S.3
Ellis, J.R.4
Pinnegar, J.K.5
Tidd, A.6
Kell, L.T.7
-
5
-
-
84861920466
-
Good practice in Bayesian network modelling
-
Chen S.H., Pollino C.A. Good practice in Bayesian network modelling. Environ. Model Softw. 2012, 37:134-145.
-
(2012)
Environ. Model Softw.
, vol.37
, pp. 134-145
-
-
Chen, S.H.1
Pollino, C.A.2
-
6
-
-
0031534855
-
The Mann Whitney Wilcoxon distribution using linked lists
-
Cheung Y.K., Klotz J.H. The Mann Whitney Wilcoxon distribution using linked lists. Stat. Sin. 1997, 7:805-813.
-
(1997)
Stat. Sin.
, vol.7
, pp. 805-813
-
-
Cheung, Y.K.1
Klotz, J.H.2
-
7
-
-
0030620998
-
Potential collapse of North Sea cod stocks
-
Cook R., Sinclair A., Stefansson G. Potential collapse of North Sea cod stocks. Nature 1997, 385:521-522.
-
(1997)
Nature
, vol.385
, pp. 521-522
-
-
Cook, R.1
Sinclair, A.2
Stefansson, G.3
-
9
-
-
0000736646
-
Changes in the North Sea ecosystem and their causes: Aarhus 1975 revisited
-
Daan N., Richardson K., Pope J.G. Changes in the North Sea ecosystem and their causes: Aarhus 1975 revisited. ICES J. Mar. Sci. 1996, 53:347.
-
(1996)
ICES J. Mar. Sci.
, vol.53
, pp. 347
-
-
Daan, N.1
Richardson, K.2
Pope, J.G.3
-
10
-
-
13844280745
-
Changes in the North Sea fish community: evidence of indirect effects of fishing?
-
Daan N., Gislason H., Pope J.G., Rice J.C. Changes in the North Sea fish community: evidence of indirect effects of fishing?. ICES J. Mar. Sci. 2005, 62:177-188.
-
(2005)
ICES J. Mar. Sci.
, vol.62
, pp. 177-188
-
-
Daan, N.1
Gislason, H.2
Pope, J.G.3
Rice, J.C.4
-
11
-
-
0036316089
-
Network structure and biodiversity loss in food webs: robustness increases with connectance
-
Dunne J.A., Williams R.J., Martinez N.D. Network structure and biodiversity loss in food webs: robustness increases with connectance. Ecol. Lett. 2002, 5:558-567.
-
(2002)
Ecol. Lett.
, vol.5
, pp. 558-567
-
-
Dunne, J.A.1
Williams, R.J.2
Martinez, N.D.3
-
12
-
-
84903723363
-
Climate change and fishing: a century of shifting distribution in North Sea cod
-
Engelhard G.H., Righton D.A., Pinnegar J.K. Climate change and fishing: a century of shifting distribution in North Sea cod. Glob. Chang. Biol. 2014, 20:2473-2483.
-
(2014)
Glob. Chang. Biol.
, vol.20
, pp. 2473-2483
-
-
Engelhard, G.H.1
Righton, D.A.2
Pinnegar, J.K.3
-
13
-
-
77957669092
-
Inferring species interaction networks from species abundance data: a comparative evaluation of various statistical and machine learning methods
-
Faisal A., Dondelinger F., Husmeier D., Beale C.M. Inferring species interaction networks from species abundance data: a comparative evaluation of various statistical and machine learning methods. Ecol. Inform. 2010, 5:451-464.
-
(2010)
Ecol. Inform.
, vol.5
, pp. 451-464
-
-
Faisal, A.1
Dondelinger, F.2
Husmeier, D.3
Beale, C.M.4
-
14
-
-
84880132172
-
Modelling the effects of climate change on the distribution and production of marine fishes: accounting for trophic interactions in a dynamic bioclimate envelope model
-
Fernandes J.A., Cheung W.W., Jennings S., Butenschön M., Mora L., Frölicher T.L., Barange M., Grant A. Modelling the effects of climate change on the distribution and production of marine fishes: accounting for trophic interactions in a dynamic bioclimate envelope model. Glob. Chang. Biol. 2013, 19:2596-2607.
-
(2013)
Glob. Chang. Biol.
, vol.19
, pp. 2596-2607
-
-
Fernandes, J.A.1
Cheung, W.W.2
Jennings, S.3
Butenschön, M.4
Mora, L.5
Frölicher, T.L.6
Barange, M.7
Grant, A.8
-
16
-
-
0033707946
-
Using Bayesian networks to analyze expression data
-
Friedman N., Linial M., Nachman I., Pe'er D. Using Bayesian networks to analyze expression data. J. Comput. Biol. 2000, 7:601-620.
-
(2000)
J. Comput. Biol.
, vol.7
, pp. 601-620
-
-
Friedman, N.1
Linial, M.2
Nachman, I.3
Pe'er, D.4
-
17
-
-
79955528580
-
Exploring the abundance-occupancy relationships for the Georges Bank finfish and shellfish community from 1963 to 2006
-
Frisk M.G., Duplisea D.E., Trenkel V.M. Exploring the abundance-occupancy relationships for the Georges Bank finfish and shellfish community from 1963 to 2006. Ecol. Appl. 2011, 21:227-240.
-
(2011)
Ecol. Appl.
, vol.21
, pp. 227-240
-
-
Frisk, M.G.1
Duplisea, D.E.2
Trenkel, V.M.3
-
18
-
-
0033781045
-
Abundance-occupancy relationships
-
Gaston K.J., Blackburn T.M., Greenwood J.J., Gregory R.D., Quinn R.M., Lawton J.H. Abundance-occupancy relationships. J. Appl. Ecol. 2000, 37:39-59.
-
(2000)
J. Appl. Ecol.
, vol.37
, pp. 39-59
-
-
Gaston, K.J.1
Blackburn, T.M.2
Greenwood, J.J.3
Gregory, R.D.4
Quinn, R.M.5
Lawton, J.H.6
-
19
-
-
0028669161
-
Ecosystem effects of fishing activities in the North Sea
-
Gislason H. Ecosystem effects of fishing activities in the North Sea. Mar. Pollut. Bull. 1994, 29:520-527.
-
(1994)
Mar. Pollut. Bull.
, vol.29
, pp. 520-527
-
-
Gislason, H.1
-
21
-
-
84861980753
-
Review of climate change impacts on marine fish and shellfish around the UK and Ireland
-
Heath M.R., Neat F.C., Pinnegar J.K., Reid D.G., Sims D.W., Wright P.J. Review of climate change impacts on marine fish and shellfish around the UK and Ireland. Aquat. Conserv. Mar. Freshwat. Ecosyst. 2012, 22:337-367.
-
(2012)
Aquat. Conserv. Mar. Freshwat. Ecosyst.
, vol.22
, pp. 337-367
-
-
Heath, M.R.1
Neat, F.C.2
Pinnegar, J.K.3
Reid, D.G.4
Sims, D.W.5
Wright, P.J.6
-
22
-
-
34249761849
-
Learning Bayesian networks: the combination of knowledge and statistical data
-
Heckerman D., Geiger D., Chickering D.M. Learning Bayesian networks: the combination of knowledge and statistical data. Mach. Learn. 1995, 20:197-243.
-
(1995)
Mach. Learn.
, vol.20
, pp. 197-243
-
-
Heckerman, D.1
Geiger, D.2
Chickering, D.M.3
-
23
-
-
0033000178
-
Fishing effects in northeast Atlantic shelf seas: patterns in fishing effort, diversity and community structure. III. International trawling effort in the North Sea: an analysis of spatial and temporal trends
-
Jennings S., Alvsvåg J., Cotter A., Ehrich S., Greenstreet S., Jarre-Teichmann A., Mergardt N., Rijnsdorp A., Smedstad O. Fishing effects in northeast Atlantic shelf seas: patterns in fishing effort, diversity and community structure. III. International trawling effort in the North Sea: an analysis of spatial and temporal trends. Fish. Res. 1999, 40:125-134.
-
(1999)
Fish. Res.
, vol.40
, pp. 125-134
-
-
Jennings, S.1
Alvsvåg, J.2
Cotter, A.3
Ehrich, S.4
Greenstreet, S.5
Jarre-Teichmann, A.6
Mergardt, N.7
Rijnsdorp, A.8
Smedstad, O.9
-
24
-
-
0036963763
-
Long-term trends in the trophic structure of the North Sea fish community: evidence from stable-isotope analysis, size-spectra and community metrics
-
Jennings S., Greenstreet S., Hill L., Piet G., Pinnegar J., Warr K. Long-term trends in the trophic structure of the North Sea fish community: evidence from stable-isotope analysis, size-spectra and community metrics. Mar. Biol. 2002, 141:1085-1097.
-
(2002)
Mar. Biol.
, vol.141
, pp. 1085-1097
-
-
Jennings, S.1
Greenstreet, S.2
Hill, L.3
Piet, G.4
Pinnegar, J.5
Warr, K.6
-
25
-
-
1842767262
-
Investigations of indirect relationships in ecology and environmental sciences: a review and the implications for comparative theoretical ecosystem analysis
-
Krivtsov V. Investigations of indirect relationships in ecology and environmental sciences: a review and the implications for comparative theoretical ecosystem analysis. Ecol. Model. 2004, 174:37-54.
-
(2004)
Ecol. Model.
, vol.174
, pp. 37-54
-
-
Krivtsov, V.1
-
26
-
-
77649189851
-
Predicting the consequences of nutrient reduction on the eutrophication status of the North Sea
-
Lenhart H.J., Mills D.K., Baretta-Bekker H., Van Leeuwen S.M., der Molen J.V., Baretta J.W., Blaas M., Desmit X., Kühn W., Lacroix G., et al. Predicting the consequences of nutrient reduction on the eutrophication status of the North Sea. J. Mar. Syst. 2010, 81:148-170.
-
(2010)
J. Mar. Syst.
, vol.81
, pp. 148-170
-
-
Lenhart, H.J.1
Mills, D.K.2
Baretta-Bekker, H.3
Van Leeuwen, S.M.4
der Molen, J.V.5
Baretta, J.W.6
Blaas, M.7
Desmit, X.8
Kühn, W.9
Lacroix, G.10
-
27
-
-
77954576424
-
Revealing ecological networks using Bayesian network inference algorithms
-
Milns I., Beale C.M., Smith V.A. Revealing ecological networks using Bayesian network inference algorithms. Ecology 2010, 91:1892-1899.
-
(2010)
Ecology
, vol.91
, pp. 1892-1899
-
-
Milns, I.1
Beale, C.M.2
Smith, V.A.3
-
29
-
-
0003229133
-
The Bayes net toolbox for Matlab
-
Murphy K., et al. The Bayes net toolbox for Matlab. Comput. Sci. Stat. 2001, 33:1024-1034.
-
(2001)
Comput. Sci. Stat.
, vol.33
, pp. 1024-1034
-
-
Murphy, K.1
-
30
-
-
21344436590
-
Climate change and distribution shifts in marine fishes
-
Perry A.L., Low P.J., Ellis J.R., Reynolds J.D. Climate change and distribution shifts in marine fishes. Science 2005, 308:1912-1915.
-
(2005)
Science
, vol.308
, pp. 1912-1915
-
-
Perry, A.L.1
Low, P.J.2
Ellis, J.R.3
Reynolds, J.D.4
-
31
-
-
70749140830
-
How does fishing alter marine populations and ecosystems sensitivity to climate?
-
Planque B., Fromentin J.M., Cury P., Drinkwater K.F., Jennings S., Perry R.I., Kifani S. How does fishing alter marine populations and ecosystems sensitivity to climate?. J. Mar. Syst. 2010, 79:403-417.
-
(2010)
J. Mar. Syst.
, vol.79
, pp. 403-417
-
-
Planque, B.1
Fromentin, J.M.2
Cury, P.3
Drinkwater, K.F.4
Jennings, S.5
Perry, R.I.6
Kifani, S.7
-
32
-
-
0030302662
-
An evaluation of the stock structure of North Sea cod, haddock, and whiting since 1920, together with a consideration of the impacts of fisheries and predation effects on their biomass and recruitment
-
1157-1069.
-
Pope J., Macer C. An evaluation of the stock structure of North Sea cod, haddock, and whiting since 1920, together with a consideration of the impacts of fisheries and predation effects on their biomass and recruitment. ICES J. Mar. Sci. 1996, 53. (1157-1069).
-
(1996)
ICES J. Mar. Sci.
, vol.53
-
-
Pope, J.1
Macer, C.2
-
33
-
-
0032031791
-
Demersal fish populations in the coastal waters of the UK and continental NW Europe from beam trawl survey data collected from 1990 to 1995
-
Rogers S., Rijnsdorp A., Damm U., Vanhee W. Demersal fish populations in the coastal waters of the UK and continental NW Europe from beam trawl survey data collected from 1990 to 1995. J. Sea Res. 1998, 39:79-102.
-
(1998)
J. Sea Res.
, vol.39
, pp. 79-102
-
-
Rogers, S.1
Rijnsdorp, A.2
Damm, U.3
Vanhee, W.4
-
34
-
-
0035846180
-
Catastrophic shifts in ecosystems
-
Scheffer M., Carpenter S., Foley J.A., Folke C., Walker B. Catastrophic shifts in ecosystems. Nature 2001, 413:591-596.
-
(2001)
Nature
, vol.413
, pp. 591-596
-
-
Scheffer, M.1
Carpenter, S.2
Foley, J.A.3
Folke, C.4
Walker, B.5
-
35
-
-
0000120766
-
Estimating the dimension of a model
-
Schwarz G., et al. Estimating the dimension of a model. Ann. Stat. 1978, 6:461-464.
-
(1978)
Ann. Stat.
, vol.6
, pp. 461-464
-
-
Schwarz, G.1
-
36
-
-
80053321739
-
Continental shelf-wide response of a fish assemblage to rapid warming of the sea
-
Simpson S.D., Jennings S., Johnson M.P., Blanchard J.L., Schön P.J., Sims D.W., Genner M.J. Continental shelf-wide response of a fish assemblage to rapid warming of the sea. Curr. Biol. 2011, 21:1565-1570.
-
(2011)
Curr. Biol.
, vol.21
, pp. 1565-1570
-
-
Simpson, S.D.1
Jennings, S.2
Johnson, M.P.3
Blanchard, J.L.4
Schön, P.J.5
Sims, D.W.6
Genner, M.J.7
-
38
-
-
33751407959
-
Computational inference of neural information flow networks
-
Smith V.A., Yu J., Smulders T.V., Hartemink A.J., Jarvis E.D. Computational inference of neural information flow networks. PLoS Comput. Biol. 2006, 2.
-
(2006)
PLoS Comput. Biol.
, vol.2
-
-
Smith, V.A.1
Yu, J.2
Smulders, T.V.3
Hartemink, A.J.4
Jarvis, E.D.5
-
39
-
-
82755174160
-
Bioinformatics tools in predictive ecology: applications to fisheries
-
Tucker A., Duplisea D. Bioinformatics tools in predictive ecology: applications to fisheries. Philos. Trans. R. Soc. B 2012, 367:279-290.
-
(2012)
Philos. Trans. R. Soc. B
, vol.367
, pp. 279-290
-
-
Tucker, A.1
Duplisea, D.2
-
40
-
-
34047185270
-
Advantages and challenges of Bayesian networks in environmental modelling
-
Uusitalo L. Advantages and challenges of Bayesian networks in environmental modelling. Ecol. Model. 2007, 203:312-318.
-
(2007)
Ecol. Model.
, vol.203
, pp. 312-318
-
-
Uusitalo, L.1
-
41
-
-
84876207583
-
Modelling the contribution of deep chlorophyll maxima to annual primary production in the North Sea
-
van Leeuwen S.M., van der Molen J., Ruardij P., Fernand L., Jickells T. Modelling the contribution of deep chlorophyll maxima to annual primary production in the North Sea. Biogeochemistry 2013, 113:137-152.
-
(2013)
Biogeochemistry
, vol.113
, pp. 137-152
-
-
van Leeuwen, S.M.1
van der Molen, J.2
Ruardij, P.3
Fernand, L.4
Jickells, T.5
-
42
-
-
22744453074
-
Precursors for resilience in coral communities in a warming climate: a belief network approach
-
Wooldridge S., Done T., Berkelmans R., Jones R., Marshall P., et al. Precursors for resilience in coral communities in a warming climate: a belief network approach. Mar. Ecol. Prog. Ser. 2005, 295:157.
-
(2005)
Mar. Ecol. Prog. Ser.
, vol.295
, pp. 157
-
-
Wooldridge, S.1
Done, T.2
Berkelmans, R.3
Jones, R.4
Marshall, P.5
|