-
2
-
-
31544450286
-
Construction of Escherichia coli k-12 in-frame, single-gene knockout mutants: The keio collection
-
Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H. 2006. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2: 2006:0008.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 2006-2008
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
3
-
-
84866887383
-
The sequential 2?,3?-cyclic phosphodiesterase and 3?-phosphate/5?-oh ligation steps of the rtcb RNA splicing pathway are gtp-dependent
-
Chakravarty AK, Shuman S. 2012. The sequential 2?,3?-cyclic phosphodiesterase and 3?-phosphate/5?-OH ligation steps of the RtcB RNA splicing pathway are GTP-dependent. Nuc leic Acids Res 40: 8558-8567.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 8558-8567
-
-
Chakravarty, A.K.1
Shuman, S.2
-
4
-
-
84859983403
-
RNA ligase rtcb splices 3?-phosphate and 5?-oh ends via covalent rtcb-(histidinyl)-gmp and polynucleotide-(3?)pp(5?)g intermediates
-
Chakravarty AK, Subbotin R, Chait BT, Shuman S. 2012. RNA ligase RtcB splices 3?-phosphate and 5?-OH ends via covalent RtcB-(histidinyl)-GMP and polynucleotide-(3?)pp( 5?)G intermediates. Proc Natl Acad Sci 109: 6072-6077.
-
(2012)
Proc Natl Acad Sci
, vol.109
, pp. 6072-6077
-
-
Chakravarty, A.K.1
Subbotin, R.2
Chait, B.T.3
Shuman, S.4
-
5
-
-
0037126846
-
Kinetic mechanism of the mg2+-dependent nucleotidyl transfer catalyzed by t4 DNA and RNA ligases
-
Cherepanov AV, de Vries S. 2002. Kinetic mechanism of the Mg2+-dependent nucleotidyl transfer catalyzed by T4 DNA and RNA ligases. J Biol Chem 277: 1695-1704.
-
(2002)
J Biol Chem
, vol.277
, pp. 1695-1704
-
-
Cherepanov, A.V.1
De Vries, S.2
-
6
-
-
84876258474
-
Structures of the noncanonical RNA ligase rtcb reveal the mechanism of histidine guanylylation
-
Desai KK, Bingman CA, Phillips GN Jr., Raines RT. 2013. Structures of the noncanonical RNA ligase RtcB reveal the mechanism of histidine guanylylation. Biochemistry 52: 2518-2525.
-
(2013)
Biochemistry
, vol.52
, pp. 2518-2525
-
-
Desai, K.K.1
Bingman, C.A.2
Phillips, G.N.3
Raines, R.T.4
-
7
-
-
84898962500
-
A tRNA splicing operon: Archease endows rtcb with dual gtp/atp cofactor specificity and accelerates RNA ligation
-
Desai KK, Cheng CL, Bingman CA, Phillips GN Jr., Raines RT. 2014. A tRNA splicing operon: Archease endows RtcB with dual GTP/ATP cofactor specificity and accelerates RNA ligation. Nucleic Acids Res 42: 3931-3942.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 3931-3942
-
-
Desai, K.K.1
Cheng, C.L.2
Bingman, C.A.3
Phillips, G.N.4
Raines, R.T.5
-
8
-
-
79952142391
-
Archaeal 3?-phosphate RNA splicing ligase characterization identifies the missing component in tRNA maturation
-
Englert M, Sheppard K, Aslanian A, Yates JR III, Söll D. 2011. Archaeal 3?-phosphate RNA splicing ligase characterization identifies the missing component in tRNA maturation. Proc Natl Acad Sci 108: 1290-1295.
-
(2011)
Proc Natl Acad Sci
, vol.108
, pp. 1290-1295
-
-
Englert, M.1
Sheppard, K.2
Aslanian, A.3
Yates, J.R.4
Söll, D.5
-
9
-
-
84918823958
-
The mammalian trna ligase complex mediates splicing of xbp 1 mRNA and controls antibody secretion in plasma cells
-
Jurkin J, Henkel T, Nielsen AF, Minnich M, Popow J, Kaufmann T, Heindl K, Hoffmann T, Busslinger M, Martinez J. 2014. The mammalian tRNA ligase complex mediates splicing of XBP 1 mRNA and controls antibody secretion in plasma cells. EMBO J 33: 2922-2936.
-
(2014)
EMBO J
, vol.33
, pp. 2922-2936
-
-
Jurkin, J.1
Henkel, T.2
Nielsen, A.F.3
Minnich, M.4
Popow, J.5
Kaufmann, T.6
Heindl, K.7
Hoffmann, T.8
Busslinger, M.9
Martinez, J.10
-
10
-
-
84915814883
-
The rtcb RNA ligase is an essential component of the metazoan unfolded protein response
-
Kosmaczewski SG, Edwards TJ, Han SM, Eckwahl MJ, Meyer BI, Peach S, Hesselberth JR, Wolin SL, Hammarlund M. 2 014. The RtcB RNA ligase is an essential component of the metazoan unfolded protein response. EMBO Rep 15: 1278-1285.
-
(2014)
EMBO Rep
, vol.15
, pp. 1278-1285
-
-
Kosmaczewski, S.G.1
Edwards, T.J.2
Han, S.M.3
Eckwahl, M.J.4
Meyer, B.I.5
Peach, S.6
Hesselberth, J.R.7
Wolin, S.L.8
Hammarlund, M.9
-
11
-
-
83755171561
-
Kinetic characterization of single strand break ligation in duplex DNA by t4 DNA ligase
-
Lohman GJ, Chen L, Evans TC Jr. 2011. Kinetic characterization of single strand break ligation in duplex DNA by T4 DNA ligase. J Biol Chem 286: 44187-44196.
-
(2011)
J Biol Chem
, vol.286
, pp. 44187-44196
-
-
Lohman, G.J.1
Chen, L.2
Evans, T.C.3
-
12
-
-
84926106643
-
A synthetic biology approach identifies the mammalian upr RNA ligase rtcb
-
Lu Y, Liang FX, Wang X. 2014 . A synthetic biology approach identifies the mammalian UPR RNA ligase RtcB. Mol Cell 55: 758-770.
-
(2014)
Mol Cell
, vol.55
, pp. 758-770
-
-
Lu, Y.1
Liang, F.X.2
Wang, X.3
-
13
-
-
79951476167
-
Hspc117 is the essential subunit of a human trna splicing ligase complex
-
Popow J, Englert M, Weitzer S, Schleiffer A, Mierzwa B, Mechtler K, Trowitzsch S, Will CL, Lührmann R, Söll D, et al. 2011. HSPC117 is the essential subunit of a human tRNA splicing ligase complex. Science 331: 760-764.
-
(2011)
Science
, vol.331
, pp. 760-764
-
-
Popow, J.1
Englert, M.2
Weitzer, S.3
Schleiffer, A.4
Mierzwa, B.5
Mechtler, K.6
Trowitzsch, S.7
Will, C.L.8
Lührmann, R.9
Söll, D.10
-
15
-
-
84903779727
-
Analysis of orthologous groups reveals archease and ddx1 as trna splicing factors
-
Popow J, Jurkin J, Schleiffer A, Martinez J. 2014. Analysis of orthologous groups reveals archease and DDX1 as tRNA splicing factors. Nature 511: 104-107.
-
(2014)
Nature
, vol.511
, pp. 104-107
-
-
Popow, J.1
Jurkin, J.2
Schleiffer, A.3
Martinez, J.4
-
16
-
-
0026599998
-
Self-splicing introns in trna genes of widely divergent bacteria
-
Reinhold-Hurek B, Shub DA. 1992. Self-splicing introns in tRNA genes of widely divergent bacteria. Nature 357: 173-176.
-
(1992)
Nature
, vol.357
, pp. 173-176
-
-
Reinhold-Hurek, B.1
Shub, D.A.2
-
17
-
-
84875251958
-
Genome-scale analysis of gene function in the hydrogenotrophic methanogenic archaeon methanococcus maripaludis
-
Sarmiento F, Mrázek J, Whitman WB. 2013. Genome-scale analysis of gene function in the hydrogenotrophic methanogenic archaeon Methanococcus maripaludis. Proc Natl Acad Sci 110: 4726-4731.
-
(2013)
Proc Natl Acad Sci
, vol.110
, pp. 4726-4731
-
-
Sarmiento, F.1
Mrázek, J.2
Whitman, W.B.3
-
18
-
-
0347994909
-
Donation of catalytic residues to RNA polymerase active center by transcription factor gre
-
Sosunova E, Sosunov V, Kozlov M, Nikiforov V, Gol dfarb A, Mustaev A. 2003. Donation of catalytic residues to RNA polymerase active center by transcription factor Gre. Proc Natl Acad Sci 100: 15469-15474.
-
(2003)
Proc Natl Acad Sci
, vol.100
, pp. 15469-15474
-
-
Sosunova, E.1
Sosunov, V.2
Kozlov, M.3
Nikiforov, V.4
Goldfarb, A.5
Mustaev, A.6
-
19
-
-
79953128577
-
Rtcb is the RNA ligase component of an Escherichia coli RNA repair operon
-
Tanaka N, Shuman S. 2011. RtcB is the RNA ligase component of an Escherichia coli RNA repair operon. J Biol Chem 286: 7727-7731.
-
(2011)
J Biol Chem
, vol.286
, pp. 7727-7731
-
-
Tanaka, N.1
Shuman, S.2
-
20
-
-
83355174071
-
Novel mechanism of RNA repair by rtcb via sequential 2?,3?-cyc lic phosphodiesterase and 3?-phosphate/5?-hydroxyl ligation reactions
-
Tanaka N, Chakravarty AK, Maughan B, Shuman S. 2011. Novel mechanism of RNA repair by RtcB via sequential 2?,3?-cyc lic phosphodiesterase and 3?-phosphate/5?-hydroxyl ligation reactions. J Biol Chem 286: 43134-43143.
-
(2011)
J Biol Chem
, vol.286
, pp. 43134-43143
-
-
Tanaka, N.1
Chakravarty, A.K.2
Maughan, B.3
Shuman, S.4
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