메뉴 건너뛰기




Volumn 182, Issue 15-16, 2015, Pages 2495-2502

G-quadruplex − based homogenous fluorescence platform for ultrasensitive DNA detection through isothermal cycling and cascade signal amplification

Author keywords

DNA detection; DNA polymerase; Fluorescent probe; G quadruplex; Nicking endonuclease; Thioflavin T

Indexed keywords


EID: 84944513204     PISSN: 00263672     EISSN: 14365073     Source Type: Journal    
DOI: 10.1007/s00604-015-1608-3     Document Type: Article
Times cited : (29)

References (34)
  • 1
    • 80054993938 scopus 로고    scopus 로고
    • Amplified analysis of DNA by the autonomous assembly of polymers consisting of DNAzyme wires
    • COI: 1:CAS:528:DC%2BC3MXhtlSqsb3E
    • Wang F, Elbaz J, Orbach R, Magen N, Willner I (2011) Amplified analysis of DNA by the autonomous assembly of polymers consisting of DNAzyme wires. J Am Chem Soc 133:17149–17151
    • (2011) J Am Chem Soc , vol.133 , pp. 17149-17151
    • Wang, F.1    Elbaz, J.2    Orbach, R.3    Magen, N.4    Willner, I.5
  • 2
    • 77952664733 scopus 로고    scopus 로고
    • Target-responsive structural switching for nucleic acid-based sensors
    • Li D, Song S, Fan C (2010) Target-responsive structural switching for nucleic acid-based sensors. Acc Chem Res 43:631–641
    • (2010) Acc Chem Res , vol.43 , pp. 631-641
    • Li, D.1    Song, S.2    Fan, C.3
  • 3
    • 84876155074 scopus 로고    scopus 로고
    • DNA-mediated homogeneous binding assays for nucleic acids and proteins
    • Zhang H, Li F, Dever B, Li X-F, Le XC (2012) DNA-mediated homogeneous binding assays for nucleic acids and proteins. Chem Rev 113:2812–2841
    • (2012) Chem Rev , vol.113 , pp. 2812-2841
    • Zhang, H.1    Li, F.2    Dever, B.3    Li, X.-F.4    Le, X.C.5
  • 4
    • 0031910311 scopus 로고    scopus 로고
    • Advances in quantitative PCR technology: 5′ nuclease assays
    • COI: 1:CAS:528:DyaK1cXhs1yhs7c%3D
    • Lie YS, Petropoulos CJ (1998) Advances in quantitative PCR technology: 5′ nuclease assays. Curr Opin Biotechnol 9:43–48
    • (1998) Curr Opin Biotechnol , vol.9 , pp. 43-48
    • Lie, Y.S.1    Petropoulos, C.J.2
  • 5
    • 84872359796 scopus 로고    scopus 로고
    • Application of quantitative PCR for the detection of microorganisms in water
    • COI: 1:CAS:528:DC%2BC38XhsVSqt7%2FF
    • Botes M, de Kwaadsteniet M, Cloete TE (2013) Application of quantitative PCR for the detection of microorganisms in water. Anal Bioanal Chem 405:91–108
    • (2013) Anal Bioanal Chem , vol.405 , pp. 91-108
    • Botes, M.1    de Kwaadsteniet, M.2    Cloete, T.E.3
  • 6
    • 38949113780 scopus 로고    scopus 로고
    • Nucleic acid isothermal amplification technologies − a review
    • COI: 1:CAS:528:DC%2BD1cXhs1WmsLw%3D
    • Gill P, Ghaemi A (2008) Nucleic acid isothermal amplification technologies − a review. Nucleosides Nucleotides Nucleic Acids 27:224–243
    • (2008) Nucleosides Nucleotides Nucleic Acids , vol.27 , pp. 224-243
    • Gill, P.1    Ghaemi, A.2
  • 7
    • 84905455052 scopus 로고    scopus 로고
    • Enzyme-assisted target recycling (EATR) for nucleic acid detection
    • COI: 1:CAS:528:DC%2BC2cXht1GqurzO
    • Gerasimova YV, Kolpashchikov DM (2014) Enzyme-assisted target recycling (EATR) for nucleic acid detection. Chem Soc Rev 43:6405–6438
    • (2014) Chem Soc Rev , vol.43 , pp. 6405-6438
    • Gerasimova, Y.V.1    Kolpashchikov, D.M.2
  • 8
    • 84907861258 scopus 로고    scopus 로고
    • Multiplex isothermal solid-phase recombinase polymerase amplification for the specific and fast DNA-based detection of three bacterial pathogens
    • COI: 1:CAS:528:DC%2BC2cXislKntLs%3D
    • Kersting S, Rausch V, Bier FF, von Nickisch-Rosenegk M (2014) Multiplex isothermal solid-phase recombinase polymerase amplification for the specific and fast DNA-based detection of three bacterial pathogens. Microchim Acta 181:1715–1723
    • (2014) Microchim Acta , vol.181 , pp. 1715-1723
    • Kersting, S.1    Rausch, V.2    Bier, F.F.3    von Nickisch-Rosenegk, M.4
  • 9
    • 84907860875 scopus 로고    scopus 로고
    • Extraction, amplification and detection of DNA in microfluidic chip-based assays
    • COI: 1:CAS:528:DC%2BC3sXhvFOisbjJ
    • Wu J, Kodzius R, Cao W, Wen W (2014) Extraction, amplification and detection of DNA in microfluidic chip-based assays. Microchim Acta 181:1611–1631
    • (2014) Microchim Acta , vol.181 , pp. 1611-1631
    • Wu, J.1    Kodzius, R.2    Cao, W.3    Wen, W.4
  • 10
    • 84901022819 scopus 로고    scopus 로고
    • Reporter-triggered isothermal exponential amplification strategy in ultrasensitive homogeneous label-free electrochemical nucleic acid biosensing
    • COI: 1:CAS:528:DC%2BC2cXotF2htr8%3D
    • Nie J, Zhang D-W, Zhang F-T, Yuan F, Zhou Y-L, Zhang X-X (2014) Reporter-triggered isothermal exponential amplification strategy in ultrasensitive homogeneous label-free electrochemical nucleic acid biosensing. Chem Commun 50:6211–6213
    • (2014) Chem Commun , vol.50 , pp. 6211-6213
    • Nie, J.1    Zhang, D.-W.2    Zhang, F.-T.3    Yuan, F.4    Zhou, Y.-L.5    Zhang, X.-X.6
  • 11
    • 84906213528 scopus 로고    scopus 로고
    • Ultrasensitive electrochemical detection of microRNA based on an arched probe mediated isothermal exponential amplification
    • COI: 1:CAS:528:DC%2BC2cXhtFyqs7fE
    • Yu Y, Chen Z, Shi L, Yang F, Pan J, Zhang B, Sun D (2014) Ultrasensitive electrochemical detection of microRNA based on an arched probe mediated isothermal exponential amplification. Anal Chem 86:8200–8205
    • (2014) Anal Chem , vol.86 , pp. 8200-8205
    • Yu, Y.1    Chen, Z.2    Shi, L.3    Yang, F.4    Pan, J.5    Zhang, B.6    Sun, D.7
  • 12
    • 84908108205 scopus 로고    scopus 로고
    • Ultrasensitive electrochemical detection of avian influenza a (H7N9) virus DNA based on isothermal exponential amplification coupled with hybridization chain reaction of DNAzyme nanowires
    • COI: 1:CAS:528:DC%2BC2cXhs1OrsLjP
    • Yu Y, Chen Z, Jian W, Sun D, Zhang B, Li X, Yao M (2015) Ultrasensitive electrochemical detection of avian influenza a (H7N9) virus DNA based on isothermal exponential amplification coupled with hybridization chain reaction of DNAzyme nanowires. Biosens Bioelectron 64:566–571
    • (2015) Biosens Bioelectron , vol.64 , pp. 566-571
    • Yu, Y.1    Chen, Z.2    Jian, W.3    Sun, D.4    Zhang, B.5    Li, X.6    Yao, M.7
  • 13
    • 84927130859 scopus 로고    scopus 로고
    • Isothermal cycling and cascade signal amplification strategy for ultrasensitive colorimetric detection of nucleic acids
    • COI: 1:CAS:528:DC%2BC2cXhvVyqs7nN
    • Xu M, He Y, Gao Z, Chen G, Tang D (2015) Isothermal cycling and cascade signal amplification strategy for ultrasensitive colorimetric detection of nucleic acids. Microchim Acta 182:449–454
    • (2015) Microchim Acta , vol.182 , pp. 449-454
    • Xu, M.1    He, Y.2    Gao, Z.3    Chen, G.4    Tang, D.5
  • 14
    • 84855363461 scopus 로고    scopus 로고
    • Sensitive detection of microRNA with isothermal amplification and a single-quantum-dot-based nanosensor
    • Zhang Y, Zhang C-Y (2011) Sensitive detection of microRNA with isothermal amplification and a single-quantum-dot-based nanosensor. Anal Chem 84:224–231
    • (2011) Anal Chem , vol.84 , pp. 224-231
    • Zhang, Y.1    Zhang, C.-Y.2
  • 15
    • 84881146095 scopus 로고    scopus 로고
    • Multiplexed detection of microRNAs by tuning DNA-scaffolded silver nanoclusters
    • COI: 1:CAS:528:DC%2BC3sXhtFOltLfF
    • Zhang M, Liu Y-Q, Yu C-Y, Yin B-C, Ye B-C (2013) Multiplexed detection of microRNAs by tuning DNA-scaffolded silver nanoclusters. Analyst 138:4812–4817
    • (2013) Analyst , vol.138 , pp. 4812-4817
    • Zhang, M.1    Liu, Y.-Q.2    Yu, C.-Y.3    Yin, B.-C.4    Ye, B.-C.5
  • 16
    • 0037446841 scopus 로고    scopus 로고
    • Isothermal reactions for the amplification of oligonucleotides
    • Van Ness J, Van Ness LK, Galas DJ (2003) Isothermal reactions for the amplification of oligonucleotides. Proc Natl Acad Sci 100:4504–4509
    • (2003) Proc Natl Acad Sci , vol.100 , pp. 4504-4509
    • Van Ness, J.1    Van Ness, L.K.2    Galas, D.J.3
  • 17
    • 0023788886 scopus 로고
    • Formation of parallel four-stranded complexes by guanine-rich motifs in DNA and its implications for meiosis
    • COI: 1:CAS:528:DyaL1cXls1GrsLk%3D
    • Sen D, Gilbert W (1988) Formation of parallel four-stranded complexes by guanine-rich motifs in DNA and its implications for meiosis. Nature 334:364–366
    • (1988) Nature , vol.334 , pp. 364-366
    • Sen, D.1    Gilbert, W.2
  • 18
    • 0032169981 scopus 로고    scopus 로고
    • DNA-enhanced peroxidase activity of a DNA aptamer-hemin complex
    • COI: 1:CAS:528:DyaK1cXmsVKjtbs%3D
    • Travascio P, Li Y, Sen D (1998) DNA-enhanced peroxidase activity of a DNA aptamer-hemin complex. Chem Biol 5:505–517
    • (1998) Chem Biol , vol.5 , pp. 505-517
    • Travascio, P.1    Li, Y.2    Sen, D.3
  • 19
    • 70350054837 scopus 로고    scopus 로고
    • An allosteric dual-DNAzyme unimolecular probe for colorimetric detection of copper (II)
    • COI: 1:CAS:528:DC%2BD1MXhtF2ltLrN
    • Yin B-C, Ye B-C, Tan W, Wang H, Xie C-C (2009) An allosteric dual-DNAzyme unimolecular probe for colorimetric detection of copper (II). J Am Chem Soc 131:14624–14625
    • (2009) J Am Chem Soc , vol.131 , pp. 14624-14625
    • Yin, B.-C.1    Ye, B.-C.2    Tan, W.3    Wang, H.4    Xie, C.-C.5
  • 20
    • 58649096996 scopus 로고    scopus 로고
    • G-quadruplex-based DNAzyme as a sensing platform for ultrasensitive colorimetric potassium detection
    • Li T, Dong S, Wang E (2009) G-quadruplex-based DNAzyme as a sensing platform for ultrasensitive colorimetric potassium detection. Chem Commun 45:580–582
    • (2009) Chem Commun , vol.45 , pp. 580-582
    • Li, T.1    Dong, S.2    Wang, E.3
  • 21
    • 67849126366 scopus 로고    scopus 로고
    • A Fok I/DNA machine that duplicates its analyte gene sequence
    • COI: 1:CAS:528:DC%2BD1cXhsVOjs77O
    • Weizmann Y, Cheglakov Z, Willner I (2008) A Fok I/DNA machine that duplicates its analyte gene sequence. J Am Chem Soc 130:17224–17225
    • (2008) J Am Chem Soc , vol.130 , pp. 17224-17225
    • Weizmann, Y.1    Cheglakov, Z.2    Willner, I.3
  • 22
    • 84874639847 scopus 로고    scopus 로고
    • Cleavage-based signal amplification of RNA
    • Zhao Y, Zhou L, Tang Z (2013) Cleavage-based signal amplification of RNA. Nat Commun 4:1493
    • (2013) Nat Commun , vol.4 , pp. 1493
    • Zhao, Y.1    Zhou, L.2    Tang, Z.3
  • 23
    • 84906871627 scopus 로고    scopus 로고
    • Exonuclease III-assisted cascade signal amplification strategy for label-free and ultrasensitive chemiluminescence detection of DNA
    • COI: 1:CAS:528:DC%2BC2cXhtlGms7jK
    • Gao Y, Li B (2014) Exonuclease III-assisted cascade signal amplification strategy for label-free and ultrasensitive chemiluminescence detection of DNA. Anal Chem 86:8881–8887
    • (2014) Anal Chem , vol.86 , pp. 8881-8887
    • Gao, Y.1    Li, B.2
  • 24
    • 84891398212 scopus 로고    scopus 로고
    • Quadratic recycling amplification for label-free and sensitive visual detection of HIV DNA
    • COI: 1:CAS:528:DC%2BC2cXhvFGht7c%3D
    • Zhou W, Gong X, Xiang Y, Yuan R, Chai Y (2014) Quadratic recycling amplification for label-free and sensitive visual detection of HIV DNA. Biosens Bioelectron 55:220–224
    • (2014) Biosens Bioelectron , vol.55 , pp. 220-224
    • Zhou, W.1    Gong, X.2    Xiang, Y.3    Yuan, R.4    Chai, Y.5
  • 25
    • 84893459796 scopus 로고    scopus 로고
    • G-quadruplex based two-stage isothermal exponential amplification reaction for label-free DNA colorimetric detection
    • COI: 1:CAS:528:DC%2BC2cXjsVWitLY%3D
    • Nie J, Zhang D-W, Tie C, Zhou Y-L, Zhang X-X (2014) G-quadruplex based two-stage isothermal exponential amplification reaction for label-free DNA colorimetric detection. Biosens Bioelectron 56:237–242
    • (2014) Biosens Bioelectron , vol.56 , pp. 237-242
    • Nie, J.1    Zhang, D.-W.2    Tie, C.3    Zhou, Y.-L.4    Zhang, X.-X.5
  • 26
    • 84871661960 scopus 로고    scopus 로고
    • Highly sensitive detection of microRNAs based on isothermal exponential amplification-assisted generation of catalytic G-quadruplex DNAzyme
    • Wang X-P, Yin B-C, Wang P, Ye B-C (2013) Highly sensitive detection of microRNAs based on isothermal exponential amplification-assisted generation of catalytic G-quadruplex DNAzyme. Biosens Bioelectron 42:131–135
    • (2013) Biosens Bioelectron , vol.42 , pp. 131-135
    • Wang, X.-P.1    Yin, B.-C.2    Wang, P.3    Ye, B.-C.4
  • 27
    • 0016425962 scopus 로고
    • The steady-state kinetics of peroxidase with 2, 2′-azino-di-(3-ethyl-benzthiazoline-6-sulphonic acid) as chromogen
    • COI: 1:STN:280:DyaE28%2FmtFGjtg%3D%3D
    • Childs RE, Bardsley WG (1975) The steady-state kinetics of peroxidase with 2, 2′-azino-di-(3-ethyl-benzthiazoline-6-sulphonic acid) as chromogen. Biochem J 145:93–103
    • (1975) Biochem J , vol.145 , pp. 93-103
    • Childs, R.E.1    Bardsley, W.G.2
  • 28
    • 84888992467 scopus 로고    scopus 로고
    • G-quadruplex DNAzyme-based chemiluminescence biosensing strategy for ultrasensitive DNA detection: combination of exonuclease III-assisted signal amplification and carbon nanotubes-assisted background reducing
    • COI: 1:CAS:528:DC%2BC3sXhslWrt7zK
    • Gao Y, Li B (2013) G-quadruplex DNAzyme-based chemiluminescence biosensing strategy for ultrasensitive DNA detection: combination of exonuclease III-assisted signal amplification and carbon nanotubes-assisted background reducing. Anal Chem 85:11494–11500
    • (2013) Anal Chem , vol.85 , pp. 11494-11500
    • Gao, Y.1    Li, B.2
  • 29
  • 30
    • 84894635332 scopus 로고    scopus 로고
    • Label-free fluorescent biosensor based on the target recycling and thioflavin T-induced quadruplex formation for short DNA species of c-erbB-2 detection
    • COI: 1:CAS:528:DC%2BC2cXjtVKiurw%3D
    • Chen J, Lin J, Zhang X, Cai S, Wu D, Li C, Yang S, Zhang J (2014) Label-free fluorescent biosensor based on the target recycling and thioflavin T-induced quadruplex formation for short DNA species of c-erbB-2 detection. Anal Chim Acta 817:42–47
    • (2014) Anal Chim Acta , vol.817 , pp. 42-47
    • Chen, J.1    Lin, J.2    Zhang, X.3    Cai, S.4    Wu, D.5    Li, C.6    Yang, S.7    Zhang, J.8
  • 31
    • 84908592839 scopus 로고    scopus 로고
    • Label-free molecular beacons for biomolecular detection
    • COI: 1:CAS:528:DC%2BC2cXhslSku7rI
    • Tan X, Wang Y, Armitage BA, Bruchez MP (2014) Label-free molecular beacons for biomolecular detection. Anal Chem 86:10864–10869
    • (2014) Anal Chem , vol.86 , pp. 10864-10869
    • Tan, X.1    Wang, Y.2    Armitage, B.A.3    Bruchez, M.P.4
  • 32
    • 84893746929 scopus 로고    scopus 로고
    • 2+) by inhibiting thioflavin T as DNA G-quadruplexes fluorescent inducer
    • COI: 1:CAS:528:DC%2BC2cXmtVGjsLk%3D
    • 2+) by inhibiting thioflavin T as DNA G-quadruplexes fluorescent inducer. Talanta 122:85–90
    • (2014) Talanta , vol.122 , pp. 85-90
    • Ge, J.1    Li, X.-P.2    Jiang, J.-H.3    Yu, R.-Q.4
  • 33
    • 84879588632 scopus 로고    scopus 로고
    • Stable label-free fluorescent sensing of biothiols based on ThT direct inducing conformation-specific G-quadruplex
    • COI: 1:CAS:528:DC%2BC3sXhtFCktLvF
    • Tong LL, Li L, Chen Z, Wang Q, Tang B (2013) Stable label-free fluorescent sensing of biothiols based on ThT direct inducing conformation-specific G-quadruplex. Biosens Bioelectron 49:420–425
    • (2013) Biosens Bioelectron , vol.49 , pp. 420-425
    • Tong, L.L.1    Li, L.2    Chen, Z.3    Wang, Q.4    Tang, B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.