Next-generation sequencing (NGS) in the identification of encephalitis-causing viruses: Unexpected detection of human herpesvirus 1 while searching for RNA pathogens

Journal of Virological Methods

Volumn 226, Issue , 2015, Pages 1-6

  Perlejewski, Karol ^a   Popiel, Marta ^a,b   Laskus, Tomasz ^a   Nakamura, Shota ^c   Motooka, Daisuke ^c   Stokowy, Tomasz ^d   Lipowski, Dariusz ^e   Pollak, Agnieszka ^f   Lechowicz, Urszula ^f   Caraballo Cortés, Kamila ^a   Stepień, Adam ^g   Radkowski, Marek ^a   Bukowska Ośko, Iwona ^a  

^a MEDICAL UNIVERSITY OF WARSAW   (Poland)

^b POSTGRADUATE SCHOOL OF MOLECULAR MEDICINE   (Poland)

^c OSAKA UNIVERSITY   (Japan)

^d UNIVERSITY OF BERGEN   (Norway)

^e SP ZOZ Wojewodzki Szpital Zakazny Centrum Diagnostyki i Terapii AIDS Warszawa   (Poland)

^f INSTITUTE OF PHYSIOLOGY AND PATHOLOGY OF HEARING   (Poland)

^g MILITARY INSTITUTE OF MEDICINE   (Poland)

Author keywords

Encephalitis; Next generation sequencing; Unknown etiology

Indexed keywords

ACICLOVIR; DEOXYRIBONUCLEASE I; VIRUS RNA;

ADULT; ARTICLE; BODY TEMPERATURE; CASE REPORT; CEREBROSPINAL FLUID ANALYSIS; CHOMCZYNSKI METHOD; COMATOSE PATIENT; COMMON COLD; CONTROLLED STUDY; DISEASE DURATION; DISEASE SEVERITY; DROWSINESS; FEMALE; FEVER; GENETIC PROCEDURES; HEADACHE; HERPES SIMPLEX ENCEPHALITIS; HERPES SIMPLEX VIRUS 1; HUMAN; ISOTHERMAL LINEAR NUCLEIC ACID AMPLIFICATION; LEUKOCYTE COUNT; MALE; METAGENOMICS; MIDDLE AGED; NEXT GENERATION SEQUENCING; NONHUMAN; NUCLEAR MAGNETIC RESONANCE IMAGING; NUCLEIC ACID AMPLIFICATION; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RNA EXTRACTION; TREATMENT DURATION; YOUNG ADULT; CEREBROSPINAL FLUID; ENCEPHALITIS, VIRAL; GENETICS; HIGH THROUGHPUT SEQUENCING; ISOLATION AND PURIFICATION; PROCEDURES; SEQUENCE ANALYSIS; VIROLOGY;

ENCEPHALITIS, VIRAL; HERPESVIRUS 1, HUMAN; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MALE; MIDDLE AGED; POLYMERASE CHAIN REACTION; RNA, VIRAL; SEQUENCE ANALYSIS, RNA;

EID: 84943600494     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2015.09.010     Document Type: Article

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