-
1
-
-
84883402071
-
Severe refractory asthma: An update
-
R.R. Wener, and E.H. Bel Severe refractory asthma: an update Eur Respir Rev 22 2013 227 235
-
(2013)
Eur Respir Rev
, vol.22
, pp. 227-235
-
-
Wener, R.R.1
Bel, E.H.2
-
2
-
-
84893513577
-
International ERS/ATS guidelines on definition, evaluation and treatment of severe asthma
-
K.F. Chung, S.E. Wenzel, J.L. Brozek, A. Bush, M. Castro, P.J. Sterk, and et al. International ERS/ATS guidelines on definition, evaluation and treatment of severe asthma Eur Respir J 43 2014 343 373
-
(2014)
Eur Respir J
, vol.43
, pp. 343-373
-
-
Chung, K.F.1
Wenzel, S.E.2
Brozek, J.L.3
Bush, A.4
Castro, M.5
Sterk, P.J.6
-
3
-
-
84899647833
-
Unsupervised phenotyping of Severe Asthma Research Program participants using expanded lung data
-
W. Wu, E. Bleecker, W. Moore, W.W. Busse, M. Castro, K.F. Chung, and et al. Unsupervised phenotyping of Severe Asthma Research Program participants using expanded lung data J Allergy Clin Immunol 133 2014 1280 1288
-
(2014)
J Allergy Clin Immunol
, vol.133
, pp. 1280-1288
-
-
Wu, W.1
Bleecker, E.2
Moore, W.3
Busse, W.W.4
Castro, M.5
Chung, K.F.6
-
4
-
-
76149146032
-
Identification of asthma phenotypes using cluster analysis in the Severe Asthma Research Program
-
W.C. Moore, D.A. Meyers, S.E. Wenzel, W.G. Teague, H. Li, X. Li, and et al. Identification of asthma phenotypes using cluster analysis in the Severe Asthma Research Program Am J Respir Crit Care Med 181 2010 315 323
-
(2010)
Am J Respir Crit Care Med
, vol.181
, pp. 315-323
-
-
Moore, W.C.1
Meyers, D.A.2
Wenzel, S.E.3
Teague, W.G.4
Li, H.5
Li, X.6
-
5
-
-
69249150516
-
T-helper type 2-driven inflammation defines major subphenotypes of asthma
-
P.G. Woodruff, B. Modrek, D.F. Choy, G. Jia, A.R. Abbas, A. Ellwanger, and et al. T-helper type 2-driven inflammation defines major subphenotypes of asthma Am J Respir Crit Care Med 180 2009 388 395
-
(2009)
Am J Respir Crit Care Med
, vol.180
, pp. 388-395
-
-
Woodruff, P.G.1
Modrek, B.2
Choy, D.F.3
Jia, G.4
Abbas, A.R.5
Ellwanger, A.6
-
6
-
-
84856845581
-
Severe asthma: From characteristics to phenotypes to endotypes
-
S. Wenzel Severe asthma: from characteristics to phenotypes to endotypes Clin Exp Allergy 42 2012 650 658
-
(2012)
Clin Exp Allergy
, vol.42
, pp. 650-658
-
-
Wenzel, S.1
-
7
-
-
84873405282
-
Asthma-associated differences in microbial composition of induced sputum
-
e1-3
-
P.R. Marri, D.A. Stern, A.L. Wright, D. Billheimer, and F.D. Martinez Asthma-associated differences in microbial composition of induced sputum J Allergy Clin Immunol 131 2013 346 352 e1-3
-
(2013)
J Allergy Clin Immunol
, vol.131
, pp. 346-352
-
-
Marri, P.R.1
Stern, D.A.2
Wright, A.L.3
Billheimer, D.4
Martinez, F.D.5
-
8
-
-
79551495183
-
Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma
-
e1-3
-
Y.J. Huang, C.E. Nelson, E.L. Brodie, T.Z. Desantis, M.S. Baek, J. Liu, and et al. Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma J Allergy Clin Immunol 127 2011 372 381 e1-3
-
(2011)
J Allergy Clin Immunol
, vol.127
, pp. 372-381
-
-
Huang, Y.J.1
Nelson, C.E.2
Brodie, E.L.3
Desantis, T.Z.4
Baek, M.S.5
Liu, J.6
-
9
-
-
77649119443
-
Disordered microbial communities in asthmatic airways
-
M. Hilty, C. Burke, H. Pedro, P. Cardenas, A. Bush, C. Bossley, and et al. Disordered microbial communities in asthmatic airways PLoS One 5 2010 e8578
-
(2010)
PLoS One
, vol.5
, pp. e8578
-
-
Hilty, M.1
Burke, C.2
Pedro, H.3
Cardenas, P.4
Bush, A.5
Bossley, C.6
-
10
-
-
84902201196
-
Lung microbiota promotes tolerance to allergens in neonates via PD-L1
-
E.S. Gollwitzer, S. Saglani, A. Trompette, K. Yadava, R. Sherburn, K.D. McCoy, and et al. Lung microbiota promotes tolerance to allergens in neonates via PD-L1 Nat Med 20 2014 642 647
-
(2014)
Nat Med
, vol.20
, pp. 642-647
-
-
Gollwitzer, E.S.1
Saglani, S.2
Trompette, A.3
Yadava, K.4
Sherburn, R.5
McCoy, K.D.6
-
11
-
-
84902147234
-
The impact of azithromycin therapy on the airway microbiota in asthma
-
M. Slater, D.W. Rivett, L. Williams, M. Martin, T. Harrison, I. Sayers, and et al. The impact of azithromycin therapy on the airway microbiota in asthma Thorax 69 2014 673 674
-
(2014)
Thorax
, vol.69
, pp. 673-674
-
-
Slater, M.1
Rivett, D.W.2
Williams, L.3
Martin, M.4
Harrison, T.5
Sayers, I.6
-
12
-
-
84865696394
-
Periostin is a systemic biomarker of eosinophilic airway inflammation in asthmatic patients
-
G. Jia, R.W. Erickson, D.F. Choy, S. Mosesova, L.C. Wu, O.D. Solberg, and et al. Periostin is a systemic biomarker of eosinophilic airway inflammation in asthmatic patients J Allergy Clin Immunol 130 2012 647 654.e10
-
(2012)
J Allergy Clin Immunol
, vol.130
, pp. 647-654e10
-
-
Jia, G.1
Erickson, R.W.2
Choy, D.F.3
Mosesova, S.4
Wu, L.C.5
Solberg, O.D.6
-
14
-
-
84905217349
-
Airway microbiome dynamics in exacerbations of chronic obstructive pulmonary disease
-
Y.J. Huang, S. Sethi, T. Murphy, S. Nariya, H.A. Boushey, and S.V. Lynch Airway microbiome dynamics in exacerbations of chronic obstructive pulmonary disease J Clin Microbiol 52 2014 2813 2823
-
(2014)
J Clin Microbiol
, vol.52
, pp. 2813-2823
-
-
Huang, Y.J.1
Sethi, S.2
Murphy, T.3
Nariya, S.4
Boushey, H.A.5
Lynch, S.V.6
-
15
-
-
77956299931
-
Deep-sea oil plume enriches indigenous oil-degrading bacteria
-
T.C. Hazen, E.A. Dubinsky, T.Z. DeSantis, G.L. Andersen, Y.M. Piceno, N. Singh, and et al. Deep-sea oil plume enriches indigenous oil-degrading bacteria Science 330 2010 204 208
-
(2010)
Science
, vol.330
, pp. 204-208
-
-
Hazen, T.C.1
Dubinsky, E.A.2
Desantis, T.Z.3
Andersen, G.L.4
Piceno, Y.M.5
Singh, N.6
-
16
-
-
34248159346
-
High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment
-
T.Z. DeSantis, E.L. Brodie, J.P. Moberg, I.X. Zubieta, Y.M. Piceno, and G.L. Andersen High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment Microb Ecol 53 2007 371 383
-
(2007)
Microb Ecol
, vol.53
, pp. 371-383
-
-
Desantis, T.Z.1
Brodie, E.L.2
Moberg, J.P.3
Zubieta, I.X.4
Piceno, Y.M.5
Andersen, G.L.6
-
17
-
-
33748805463
-
Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation
-
E.L. Brodie, T.Z. Desantis, D.C. Joyner, S.M. Baek, J.T. Larsen, G.L. Andersen, and et al. Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation Appl Environ Microbiol 72 2006 6288 6298
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 6288-6298
-
-
Brodie, E.L.1
Desantis, T.Z.2
Joyner, D.C.3
Baek, S.M.4
Larsen, J.T.5
Andersen, G.L.6
-
18
-
-
84857122937
-
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
-
D. McDonald, M.N. Price, J. Goodrich, E.P. Nawrocki, T.Z. DeSantis, A. Probst, and et al. An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea ISME J 6 2012 610 618
-
(2012)
ISME J
, vol.6
, pp. 610-618
-
-
McDonald, D.1
Price, M.N.2
Goodrich, J.3
Nawrocki, E.P.4
DeSantis, T.Z.5
Probst, A.6
-
19
-
-
84875885665
-
Analysis of the microbial gene landscape and transcriptome for aromatic pollutants and alkane degradation using a novel internally calibrated microarray system
-
R. Vilchez-Vargas, R. Geffers, M. Suarez-Diez, I. Conte, A. Waliczek, V.S. Kaser, and et al. Analysis of the microbial gene landscape and transcriptome for aromatic pollutants and alkane degradation using a novel internally calibrated microarray system Environ Microbiol 15 2013 1016 1039
-
(2013)
Environ Microbiol
, vol.15
, pp. 1016-1039
-
-
Vilchez-Vargas, R.1
Geffers, R.2
Suarez-Diez, M.3
Conte, I.4
Waliczek, A.5
Kaser, V.S.6
-
20
-
-
17144420448
-
Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray
-
T.Z. DeSantis, C.E. Stone, S.R. Murray, J.P. Moberg, and G.L. Andersen Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray FEMS Microbiol Lett 245 2005 271 278
-
(2005)
FEMS Microbiol Lett
, vol.245
, pp. 271-278
-
-
DeSantis, T.Z.1
Stone, C.E.2
Murray, S.R.3
Moberg, J.P.4
Andersen, G.L.5
-
21
-
-
84872497741
-
Vegan: Community ecology package
-
Oksanen J, Kindt T, Legendre P, O'Hara B, Simpson GL, Solymos P, et al. Vegan: community ecology package. Vienna (Austria): R Project for Statistical Computing; 2008.
-
(2008)
Vienna (Austria): R Project for Statistical Computing
-
-
Oksanen, J.1
Kindt, T.2
Legendre, P.3
O'Hara, B.4
Simpson, G.L.5
Solymos, P.6
-
22
-
-
77953882250
-
Picante: R tools for integrating phylogenies and ecology
-
S.W. Kembel, P.D. Cowan, M.R. Helmus, W.K. Cornwell, H. Morlon, D.D. Ackerly, and et al. Picante: R tools for integrating phylogenies and ecology Bioinformatics 26 2010 1463 1464
-
(2010)
Bioinformatics
, vol.26
, pp. 1463-1464
-
-
Kembel, S.W.1
Cowan, P.D.2
Helmus, M.R.3
Cornwell, W.K.4
Morlon, H.5
Ackerly, D.D.6
-
23
-
-
0026499429
-
Conservation evaluation and phylogenetic diversity
-
D.P. Faith Conservation evaluation and phylogenetic diversity Biol Conserv 61 1992 1 10
-
(1992)
Biol Conserv
, vol.61
, pp. 1-10
-
-
Faith, D.P.1
-
24
-
-
29144464937
-
UniFrac: A new phylogenetic method for comparing microbial communities
-
C. Lozupone, and R. Knight UniFrac: a new phylogenetic method for comparing microbial communities Appl Environ Microbiol 71 2005 8228 8235
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
26
-
-
0002154022
-
A new method for non-parametric multivariate analysis of variance
-
M.J. Anderson A new method for non-parametric multivariate analysis of variance Austral Ecol 26 2001 32 46
-
(2001)
Austral Ecol
, vol.26
, pp. 32-46
-
-
Anderson, M.J.1
-
27
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
V.G. Tusher, R. Tibshirani, and G. Chu Significance analysis of microarrays applied to the ionizing radiation response Proc Natl Acad Sci U S A 98 2001 5116 5121
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
28
-
-
0042424602
-
Statistical significance for genomewide studies
-
J.D. Storey, and R. Tibshirani Statistical significance for genomewide studies Proc Natl Acad Sci U S A 100 2003 9440 9445
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
29
-
-
84884127512
-
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
-
M.G. Langille, J. Zaneveld, J.G. Caporaso, D. McDonald, D. Knights, J.A. Reyes, and et al. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences Nat Biotechnol 31 2013 814 821
-
(2013)
Nat Biotechnol
, vol.31
, pp. 814-821
-
-
Langille, M.G.1
Zaneveld, J.2
Caporaso, J.G.3
McDonald, D.4
Knights, D.5
Reyes, J.A.6
-
30
-
-
77953095629
-
Independent filtering increases detection power for high-throughput experiments
-
R. Bourgon, R. Gentleman, and W. Huber Independent filtering increases detection power for high-throughput experiments Proc Natl Acad Sci U S A 107 2010 9546 9551
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 9546-9551
-
-
Bourgon, R.1
Gentleman, R.2
Huber, W.3
-
31
-
-
35649028488
-
Genome-wide profiling identifies epithelial cell genes associated with asthma and with treatment response to corticosteroids
-
P.G. Woodruff, H.A. Boushey, G.M. Dolganov, C.S. Barker, Y.H. Yang, S. Donnelly, and et al. Genome-wide profiling identifies epithelial cell genes associated with asthma and with treatment response to corticosteroids Proc Natl Acad Sci U S A 104 2007 15858 15863
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 15858-15863
-
-
Woodruff, P.G.1
Boushey, H.A.2
Dolganov, G.M.3
Barker, C.S.4
Yang, Y.H.5
Donnelly, S.6
-
32
-
-
17944364849
-
Requirement of interleukin 17 receptor signaling for lung CXC chemokine and granulocyte colony-stimulating factor expression, neutrophil recruitment, and host defense
-
P. Ye, F.H. Rodriguez, S. Kanaly, K.L. Stocking, J. Schurr, P. Schwarzenberger, and et al. Requirement of interleukin 17 receptor signaling for lung CXC chemokine and granulocyte colony-stimulating factor expression, neutrophil recruitment, and host defense J Exp Med 194 2001 519 527
-
(2001)
J Exp Med
, vol.194
, pp. 519-527
-
-
Ye, P.1
Rodriguez, F.H.2
Kanaly, S.3
Stocking, K.L.4
Schurr, J.5
Schwarzenberger, P.6
-
33
-
-
80052025535
-
Treatment with IL-17 prolongs the half-life of chemokine CXCL1 mRNA via the adaptor TRAF5 and the splicing-regulatory factor SF2 (ASF)
-
D. Sun, M. Novotny, K. Bulek, C. Liu, X. Li, and T. Hamilton Treatment with IL-17 prolongs the half-life of chemokine CXCL1 mRNA via the adaptor TRAF5 and the splicing-regulatory factor SF2 (ASF) Nat Immunol 12 2011 853 860
-
(2011)
Nat Immunol
, vol.12
, pp. 853-860
-
-
Sun, D.1
Novotny, M.2
Bulek, K.3
Liu, C.4
Li, X.5
Hamilton, T.6
-
34
-
-
35748973565
-
IL-17 enhances chemokine gene expression through mRNA stabilization
-
J. Hartupee, C. Liu, M. Novotny, X. Li, and T. Hamilton IL-17 enhances chemokine gene expression through mRNA stabilization J Immunol 179 2007 4135 4141
-
(2007)
J Immunol
, vol.179
, pp. 4135-4141
-
-
Hartupee, J.1
Liu, C.2
Novotny, M.3
Li, X.4
Hamilton, T.5
-
35
-
-
84887323708
-
Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis
-
J.U. Scher, A. Sczesnak, R.S. Longman, N. Segata, C. Ubeda, C. Bielski, and et al. Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis Elife 2 2013 e01202
-
(2013)
Elife
, vol.2
, pp. e01202
-
-
Scher, J.U.1
Sczesnak, A.2
Longman, R.S.3
Segata, N.4
Ubeda, C.5
Bielski, C.6
-
36
-
-
84899534357
-
Periodontal pathogens directly promote autoimmune experimental arthritis by inducing a TLR2- and IL-1-driven Th17 response
-
S.G. de Aquino, S. Abdollahi-Roodsaz, M.I. Koenders, F.A. van de Loo, G.J. Pruijn, R.J. Marijnissen, and et al. Periodontal pathogens directly promote autoimmune experimental arthritis by inducing a TLR2- and IL-1-driven Th17 response J Immunol 192 2014 4103 4111
-
(2014)
J Immunol
, vol.192
, pp. 4103-4111
-
-
De Aquino, S.G.1
Abdollahi-Roodsaz, S.2
Koenders, M.I.3
Van De Loo, F.A.4
Pruijn, G.J.5
Marijnissen, R.J.6
-
37
-
-
85027947787
-
Induction of colonic regulatory T cells by indigenous Clostridium species
-
K. Atarashi, T. Tanoue, T. Shima, A. Imaoka, T. Kuwahara, Y. Momose, and et al. Induction of colonic regulatory T cells by indigenous Clostridium species Science 331 2011 337 341
-
(2011)
Science
, vol.331
, pp. 337-341
-
-
Atarashi, K.1
Tanoue, T.2
Shima, T.3
Imaoka, A.4
Kuwahara, T.5
Momose, Y.6
-
38
-
-
84881477044
-
Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
-
K. Atarashi, T. Tanoue, K. Oshima, W. Suda, Y. Nagano, H. Nishikawa, and et al. Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota Nature 500 2013 232 236
-
(2013)
Nature
, vol.500
, pp. 232-236
-
-
Atarashi, K.1
Tanoue, T.2
Oshima, K.3
Suda, W.4
Nagano, Y.5
Nishikawa, H.6
-
39
-
-
34548746905
-
Genomics of Actinobacteria: Tracing the evolutionary history of an ancient phylum
-
M. Ventura, C. Canchaya, A. Tauch, G. Chandra, G.F. Fitzgerald, K.F. Chater, and et al. Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum Microbiol Mol Biol Rev 71 2007 495 548
-
(2007)
Microbiol Mol Biol Rev
, vol.71
, pp. 495-548
-
-
Ventura, M.1
Canchaya, C.2
Tauch, A.3
Chandra, G.4
Fitzgerald, G.F.5
Chater, K.F.6
-
40
-
-
77955923362
-
Man's best friend? the effect of pet ownership on house dust microbial communities
-
e1-3
-
K.E. Fujimura, C.C. Johnson, D.R. Ownby, M.J. Cox, E.L. Brodie, S.L. Havstad, and et al. Man's best friend? The effect of pet ownership on house dust microbial communities J Allergy Clin Immunol 126 2010 410 412 e1-3
-
(2010)
J Allergy Clin Immunol
, vol.126
, pp. 410-412
-
-
Fujimura, K.E.1
Johnson, C.C.2
Ownby, D.R.3
Cox, M.J.4
Brodie, E.L.5
Havstad, S.L.6
-
41
-
-
84943451275
-
Mutually exclusive Th2 and Th17 bronchial gene expression signatures are associated with eosinophilia in asthma
-
Presented at Munich, Germany
-
Choy D, Shikotra A, Siddiqui S, Nagarkar D, Abbas A, Ohri C, et al. Mutually exclusive Th2 and Th17 bronchial gene expression signatures are associated with eosinophilia in asthma. Presented at: European Respiratory Society International Congress; Munich, Germany; 2014.
-
(2014)
European Respiratory Society International Congress
-
-
Choy, D.1
Shikotra, A.2
Siddiqui, S.3
Nagarkar, D.4
Abbas, A.5
Ohri, C.6
-
42
-
-
79959937269
-
Th17 cells: New players in asthma pathogenesis
-
L. Cosmi, F. Liotta, E. Maggi, S. Romagnani, and F. Annunziato Th17 cells: new players in asthma pathogenesis Allergy 66 2011 989 998
-
(2011)
Allergy
, vol.66
, pp. 989-998
-
-
Cosmi, L.1
Liotta, F.2
Maggi, E.3
Romagnani, S.4
Annunziato, F.5
-
43
-
-
56149097181
-
TH17 cells mediate steroid-resistant airway inflammation and airway hyperresponsiveness in mice
-
L. McKinley, J.F. Alcorn, A. Peterson, R.B. Dupont, S. Kapadia, A. Logar, and et al. TH17 cells mediate steroid-resistant airway inflammation and airway hyperresponsiveness in mice J Immunol 181 2008 4089 4097
-
(2008)
J Immunol
, vol.181
, pp. 4089-4097
-
-
McKinley, L.1
Alcorn, J.F.2
Peterson, A.3
Dupont, R.B.4
Kapadia, S.5
Logar, A.6
-
44
-
-
84893512299
-
Disconnect between sputum neutrophils and other measures of airway inflammation in asthma
-
J.R. Arron, D.F. Choy, M. Laviolette, S.G. Kelsen, A. Hatab, R. Leigh, and et al. Disconnect between sputum neutrophils and other measures of airway inflammation in asthma Eur Respir J 43 2014 627 629
-
(2014)
Eur Respir J
, vol.43
, pp. 627-629
-
-
Arron, J.R.1
Choy, D.F.2
Laviolette, M.3
Kelsen, S.G.4
Hatab, A.5
Leigh, R.6
|