-
1
-
-
0013920263
-
Preparation and study of fragments of single rabbit nephrons
-
Burg M, Grantham J, Abramow M, Orloff J: Preparation and study of fragments of single rabbit nephrons. Am J Physiol 210: 1293-1298, 1966
-
(1966)
Am J Physiol
, vol.210
, pp. 1293-1298
-
-
Burg, M.1
Grantham, J.2
Abramow, M.3
Orloff, J.4
-
2
-
-
0344823857
-
A panoramic view of gene expression in the human kidney
-
Chabardos-Garonne D, Mejéan A, Aude JC, Cheval L, Di Stefano A, Gaillard MC, Imbert-Teboul M, Wittner M, Balian C, Anthouard V, Robert C, Ségurens B,Wincker P,Weissenbach J,Doucet A, Elalouf JM: A panoramic view of gene expression in the human kidney. Proc Natl Acad Sci U S A 100: 13710-13715, 2003
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 13710-13715
-
-
Chabardos-Garonne, D.1
Mejéan, A.2
Aude, J.C.3
Cheval, L.4
Di Stefano, A.5
Gaillard, M.C.6
Imbert-Teboul, M.7
Wittner, M.8
Balian, C.9
Anthouard, V.10
Robert, C.11
Ségurens, B.12
Wincker, P.13
Weissenbach, J.14
Doucet, A.15
Elalouf, J.M.16
-
3
-
-
79951929094
-
Atlas of gene expression in the mouse kidney: New features of glomerular parietal cells
-
Cheval L, Pierrat F, Dossat C, Genete M, Imbert-Teboul M, Duong Van Huyen JP, Poulain J,Wincker P, Weissenbach J, Piquemal D, Doucet A: Atlas of gene expression in the mouse kidney: New features of glomerular parietal cells. Physiol Genomics 43: 161-173, 2011
-
(2011)
Physiol Genomics
, vol.43
, pp. 161-173
-
-
Cheval, L.1
Pierrat, F.2
Dossat, C.3
Genete, M.4
Imbert-Teboul, M.5
Duong Van Huyen, J.P.6
Poulain, J.7
Wincker, P.8
Weissenbach, J.9
Piquemal, D.10
Doucet, A.11
-
4
-
-
84884826911
-
The nextgeneration sequencing revolution and its impact on genomics
-
Koboldt DC, Steinberg KM, Larson DE,Wilson RK,Mardis ER: The nextgeneration sequencing revolution and its impact on genomics. Cell 155: 27-38, 2013
-
(2013)
Cell
, vol.155
, pp. 27-38
-
-
Koboldt, D.C.1
Steinberg, K.M.2
Larson, D.E.3
Wilson, R.K.4
Mardis, E.R.5
-
5
-
-
57749195712
-
RNA-Seq: A revolutionary tool for transcriptomics
-
Wang Z, Gerstein M, Snyder M: RNA-Seq: A revolutionary tool for transcriptomics. Nat Rev Genet 10: 57-63, 2009
-
(2009)
Nat Rev Genet
, vol.10
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
6
-
-
84906228597
-
Single-cell RNA-seq: Advances and future challenges
-
Saliba AE, Westermann AJ, Gorski SA, Vogel J: Single-cell RNA-seq: Advances and future challenges. Nucleic Acids Res 42: 8845-8860, 2014
-
(2014)
Nucleic Acids Res
, vol.42
, pp. 8845-8860
-
-
Saliba, A.E.1
Westermann, A.J.2
Gorski, S.A.3
Vogel, J.4
-
7
-
-
67349146589
-
mRNA-Seq wholetranscriptome analysis of a single cell
-
Tang F, Barbacioru C, Wang Y, Nordman E, Lee C, Xu N, Wang X, Bodeau J, Tuch BB, Siddiqui A, Lao K, Surani MA: mRNA-Seq wholetranscriptome analysis of a single cell. Nat Methods 6: 377-382, 2009
-
(2009)
Nat Methods
, vol.6
, pp. 377-382
-
-
Tang, F.1
Barbacioru, C.2
Wang, Y.3
Nordman, E.4
Lee, C.5
Xu, N.6
Wang, X.7
Bodeau, J.8
Tuch, B.B.9
Siddiqui, A.10
Lao, K.11
Surani, M.A.12
-
8
-
-
84883611839
-
Distinct polyadenylation landscapes of diverse human tissues revealed by a modified PA-seq strategy
-
Ni T, Yang Y, Hafez D, YangW, Kiesewetter K,Wakabayashi Y, Ohler U, Peng W, Zhu J: Distinct polyadenylation landscapes of diverse human tissues revealed by a modified PA-seq strategy. BMC Genomics 14: 615, 2013
-
(2013)
BMC Genomics
, vol.14
, pp. 615
-
-
Ni, T.1
Yang, Y.2
Hafez, D.3
Yang, W.4
Kiesewetter, K.5
Wakabayashi, Y.6
Ohler, U.7
Peng, W.8
Zhu, J.9
-
9
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
Mortazavi A,Williams BA,McCue K, Schaeffer L,Wold B:Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods 5: 621-628, 2008
-
(2008)
Nat Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
10
-
-
47649124124
-
A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
-
Sultan M, Schulz MH, Richard H, Magen A, Klingenhoff A, Scherf M, Seifert M, Borodina T, Soldatov A, Parkhomchuk D, Schmidt D, O'Keeffe S, Haas S, Vingron M, Lehrach H, Yaspo ML: A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. Science 321: 956-960, 2008
-
(2008)
Science
, vol.321
, pp. 956-960
-
-
Sultan, M.1
Schulz, M.H.2
Richard, H.3
Magen, A.4
Klingenhoff, A.5
Scherf, M.6
Seifert, M.7
Borodina, T.8
Soldatov, A.9
Parkhomchuk, D.10
Schmidt, D.11
O'Keeffe, S.12
Haas, S.13
Vingron, M.14
Lehrach, H.15
Yaspo, M.L.16
-
11
-
-
2942596881
-
Aquaporin water channels in mammalian kidney
-
edited by Seldin DW, Giebisch G, Philadelphia, Lippincott
-
Agre P, Nielsen S, Knepper M.A.: Aquaporin water channels in mammalian kidney. In: The Kidney: Physiology and Pathophysiology, edited by Seldin DW, Giebisch G, Philadelphia, Lippincott 2000, pp 363-378
-
(2000)
The Kidney: Physiology and Pathophysiology
, pp. 363-378
-
-
Agre, P.1
Nielsen, S.2
Knepper, M.A.3
-
12
-
-
0006270405
-
The membrane transporter families in mammals
-
edited by Seldin DW, Giebisch G, Philadelphia, Lippincott
-
Berger UV, Peng J-B, Hediger MA: The membrane transporter families in mammals. In: The Kidney: Physiology and Pathophysiology, edited by Seldin DW, Giebisch G, Philadelphia, Lippincott, 2000, pp 107-138
-
(2000)
The Kidney: Physiology and Pathophysiology
, pp. 107-138
-
-
Berger, U.V.1
Peng, J.-B.2
Hediger, M.A.3
-
13
-
-
0033585007
-
The gamma subunit modulates Na(+) and K(+) affinity of the renal Na,K-ATPase
-
Arystarkhova E, Wetzel RK, Asinovski NK, Sweadner KJ: The gamma subunit modulates Na(+) and K(+) affinity of the renal Na,K-ATPase. J Biol Chem 274: 33183-33185, 1999
-
(1999)
J Biol Chem
, vol.274
, pp. 33183-33185
-
-
Arystarkhova, E.1
Wetzel, R.K.2
Asinovski, N.K.3
Sweadner, K.J.4
-
14
-
-
79955955099
-
Post-transcriptional control ofNa,K-ATPase activity and cell growth by a splice variant of FXYD2 protein with modified mRNA
-
Sweadner KJ, Pascoa JL, Salazar CA, Arystarkhova E: Post-transcriptional control ofNa,K-ATPase activity and cell growth by a splice variant of FXYD2 protein with modified mRNA. J Biol Chem286: 18290-18300, 2011
-
(2011)
J Biol Chem
, vol.286
, pp. 18290-18300
-
-
Sweadner, K.J.1
Pascoa, J.L.2
Salazar, C.A.3
Arystarkhova, E.4
-
15
-
-
37249049985
-
Renal response to metabolic acidosis: Role of mRNA stabilization
-
Ibrahim H, Lee YJ, Curthoys NP: Renal response to metabolic acidosis: Role of mRNA stabilization. Kidney Int 73: 11-18, 2008
-
(2008)
Kidney Int
, vol.73
, pp. 11-18
-
-
Ibrahim, H.1
Lee, Y.J.2
Curthoys, N.P.3
-
16
-
-
0025650951
-
Phosphate-dependent glutaminase activity in rat renal cortical and medullary tubule segments
-
Wright PA, KnepperMA: Phosphate-dependent glutaminase activity in rat renal cortical and medullary tubule segments. Am J Physiol 259: F961-F970, 1990
-
(1990)
Am J Physiol
, vol.259
, pp. F961-F970
-
-
Wright, P.A.1
Knepper, M.A.2
-
17
-
-
13844308077
-
Primate beta-defensins-structure, function and evolution
-
Crovella S, Antcheva N, Zelezetsky I, Boniotto M, Pacor S, Verga Falzacappa MV, Tossi A: Primate beta-defensins-structure, function and evolution. Curr Protein Pept Sci 6: 7-21, 2005
-
(2005)
Curr Protein Pept Sci
, vol.6
, pp. 7-21
-
-
Crovella, S.1
Antcheva, N.2
Zelezetsky, I.3
Boniotto, M.4
Pacor, S.5
Verga Falzacappa, M.V.6
Tossi, A.7
-
18
-
-
84862198697
-
AnimalTFDB: A comprehensive animal transcription factor database
-
ZhangHM, ChenH, Liu W, Liu H,Gong J,WangH,Guo AY: AnimalTFDB: A comprehensive animal transcription factor database. Nucleic Acids Res 40: D144-D149, 2012
-
(2012)
Nucleic Acids Res
, vol.40
, pp. D144-D149
-
-
Zhang, H.M.1
Chen, H.2
Liu, W.3
Liu, H.4
Gong, J.5
Wang, H.6
Guo, A.Y.7
-
19
-
-
0032956537
-
Expression of green fluorescent protein in the ureteric bud of transgenic mice: A new tool for the analysis of ureteric bud morphogenesis
-
Srinivas S, Goldberg MR, Watanabe T, D'Agati V, al-Awqati Q, Costantini F: Expression of green fluorescent protein in the ureteric bud of transgenic mice: A new tool for the analysis of ureteric bud morphogenesis. Dev Genet 24: 241-251, 1999
-
(1999)
Dev Genet
, vol.24
, pp. 241-251
-
-
Srinivas, S.1
Goldberg, M.R.2
Watanabe, T.3
D'Agati, V.4
Al-Awqati, Q.5
Costantini, F.6
-
20
-
-
0017781944
-
Carbohydrate metabolism in rat kidney: Heterogeneous distribution of glycolytic and gluconeogenic key enzymes
-
Schmid H, Scholz M, Mall A, Schmidt U, Guder WG, Dubach UC: Carbohydrate metabolism in rat kidney: Heterogeneous distribution of glycolytic and gluconeogenic key enzymes. Curr Probl Clin Biochem 8: 282-289, 1977
-
(1977)
Curr Probl Clin Biochem
, vol.8
, pp. 282-289
-
-
Schmid, H.1
Scholz, M.2
Mall, A.3
Schmidt, U.4
Guder, W.G.5
Dubach, U.C.6
-
21
-
-
4744358044
-
Renal arginine metabolism
-
Brosnan ME, Brosnan JT: Renal arginine metabolism. J Nutr 134[10 Suppl]: 2791S-2795S, 2004
-
(2004)
J Nutr
, vol.134
, Issue.10
, pp. 2791S-2795S
-
-
Brosnan, M.E.1
Brosnan, J.T.2
-
22
-
-
0024264644
-
Substrate specificity to maintain cellular ATP along the mouse nephron
-
Uchida S, Endou H: Substrate specificity to maintain cellular ATP along the mouse nephron. Am J Physiol 255: F977-F983, 1988
-
(1988)
Am J Physiol
, vol.255
, pp. F977-F983
-
-
Uchida, S.1
Endou, H.2
-
23
-
-
0018976577
-
Substrate oxidation by defined single nephron segments of rat kidney
-
Klein KI, Wang MS, Torikai S, Davidson W, Kurokawa K: Substrate oxidation by defined single nephron segments of rat kidney. Int J Biochem 12: 53-54, 1980
-
(1980)
Int J Biochem
, vol.12
, pp. 53-54
-
-
Klein, K.I.1
Wang, M.S.2
Torikai, S.3
Davidson, W.4
Kurokawa, K.5
-
24
-
-
0028218833
-
Metabolic support of Na+ transport by the rabbit CCD: Analysis of the use of equivalent current
-
Nonaka T, Stokes JB: Metabolic support of Na+ transport by the rabbit CCD: Analysis of the use of equivalent current. Kidney Int 45: 743-752, 1994
-
(1994)
Kidney Int
, vol.45
, pp. 743-752
-
-
Nonaka, T.1
Stokes, J.B.2
-
25
-
-
0021128896
-
Lactate dehydrogenase. Biochemistry and function of lactate dehydrogenase
-
Markert CL: Lactate dehydrogenase. Biochemistry and function of lactate dehydrogenase. Cell Biochem Funct 2: 131-134, 1984
-
(1984)
Cell Biochem Funct
, vol.2
, pp. 131-134
-
-
Markert, C.L.1
-
26
-
-
0013836289
-
Lactate concentration in the medulla of rat kidney
-
Scaglione PR, Dell RB, Winters RW: Lactate concentration in the medulla of rat kidney. Am J Physiol 209: 1193-1198, 1965
-
(1965)
Am J Physiol
, vol.209
, pp. 1193-1198
-
-
Scaglione, P.R.1
Dell, R.B.2
Winters, R.W.3
-
27
-
-
0037216444
-
Inner medullary lactate production and urineconcentrating mechanism: A flat medullary model
-
Hervy S, Thomas SR: Inner medullary lactate production and urineconcentrating mechanism: A flat medullary model. Am J Physiol Renal Physiol 284: F65-F81, 2003
-
(2003)
Am J Physiol Renal Physiol
, vol.284
, pp. F65-F81
-
-
Hervy, S.1
Thomas, S.R.2
-
28
-
-
84862908959
-
The betaine-GABA transporter (BGT1, slc6a12) is predominantly expressed in the liver and at lower levels in the kidneys and at the brain surface
-
Zhou Y, Holmseth S, Hua R, Lehre AC, Olofsson AM, Poblete-Naredo I, Kempson SA, Danbolt NC: The betaine-GABA transporter (BGT1, slc6a12) is predominantly expressed in the liver and at lower levels in the kidneys and at the brain surface. Am J Physiol Renal Physiol 302: F316-F328, 2012
-
(2012)
Am J Physiol Renal Physiol
, vol.302
, pp. F316-F328
-
-
Zhou, Y.1
Holmseth, S.2
Hua, R.3
Lehre, A.C.4
Olofsson, A.M.5
Poblete-Naredo, I.6
Kempson, S.A.7
Danbolt, N.C.8
-
29
-
-
58549112996
-
Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
-
Huang W, Sherman BT, Lempicki RA: Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res 37: 1-13, 2009
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1-13
-
-
Huang, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
30
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang W, Sherman BT, Lempicki RA: Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4: 44-57, 2009
-
(2009)
Nat Protoc
, vol.4
, pp. 44-57
-
-
Huang, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
31
-
-
60749123442
-
A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney
-
Yu J, Carroll TJ, Rajagopal J, Kobayashi A, Ren Q, McMahon AP: A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney. Development 136: 161-171, 2009
-
(2009)
Development
, vol.136
, pp. 161-171
-
-
Yu, J.1
Carroll, T.J.2
Rajagopal, J.3
Kobayashi, A.4
Ren, Q.5
McMahon, A.P.6
-
32
-
-
60549093206
-
Systems-level analysis of cell-specific AQP2 gene expression in renal collecting duct
-
Yu MJ, Miller RL, Uawithya P, Rinschen MM, Khositseth S, Braucht DW, Chou CL, Pisitkun T, Nelson RD, KnepperMA: Systems-level analysis of cell-specific AQP2 gene expression in renal collecting duct. Proc Natl Acad Sci U S A 106: 2441-2446, 2009
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 2441-2446
-
-
Yu, M.J.1
Miller, R.L.2
Uawithya, P.3
Rinschen, M.M.4
Khositseth, S.5
Braucht, D.W.6
Chou, C.L.7
Pisitkun, T.8
Nelson, R.D.9
Knepper, M.A.10
-
33
-
-
38749151529
-
Transcriptional profiling of native inner medullary collecting duct cells from rat kidney
-
Uawithya P, Pisitkun T, Ruttenberg BE, Knepper MA: Transcriptional profiling of native inner medullary collecting duct cells from rat kidney. Physiol Genomics 32: 229-253, 2008
-
(2008)
Physiol Genomics
, vol.32
, pp. 229-253
-
-
Uawithya, P.1
Pisitkun, T.2
Ruttenberg, B.E.3
Knepper, M.A.4
-
34
-
-
0018819874
-
Improved renal cortical tubule suspension: Spectrophotometric study of O2 delivery
-
Balaban RS, Soltoff SP, Storey JM, Mandel LJ: Improved renal cortical tubule suspension: Spectrophotometric study of O2 delivery. Am J Physiol 238: F50-F59, 1980
-
(1980)
Am J Physiol
, vol.238
, pp. F50-F59
-
-
Balaban, R.S.1
Soltoff, S.P.2
Storey, J.M.3
Mandel, L.J.4
-
35
-
-
0021662679
-
Suspension ofmedullary thick ascending limb tubules fromthe rabbit kidney
-
Chamberlin ME, LeFurgey A,Mandel LJ: Suspension ofmedullary thick ascending limb tubules fromthe rabbit kidney.AmJ Physiol 247: F955 F964, 1984
-
(1984)
Am J Physiol
, vol.247
, pp. F955-F964
-
-
Chamberlin, M.E.1
LeFurgey, A.2
Mandel, L.J.3
-
36
-
-
0023628435
-
Purification of rat papillary collecting duct cells: Functional and metabolic assessment
-
Stokes JB, Grupp C, Kinne RK: Purification of rat papillary collecting duct cells: Functional and metabolic assessment. Am J Physiol 253: F251-F262, 1987
-
(1987)
Am J Physiol
, vol.253
, pp. F251-F262
-
-
Stokes, J.B.1
Grupp, C.2
Kinne, R.K.3
-
38
-
-
77749323185
-
RNA-Seq analysis to capture the transcriptome landscape of a single cell
-
Tang F, BarbacioruC,Nordman E, Li B, XuN, Bashkirov VI, Lao K, Surani MA: RNA-Seq analysis to capture the transcriptome landscape of a single cell. Nat Protoc 5: 516-535, 2010
-
(2010)
Nat Protoc
, vol.5
, pp. 516-535
-
-
Tang, F.1
Barbacioru, C.2
Nordman, E.3
Li, B.4
Xu, N.5
Bashkirov, V.I.6
Lao, K.7
Surani, M.A.8
-
39
-
-
84871809302
-
STAR: Ultrafast universal RNA-seq aligner
-
Dobin A, Davis CA, Schlesinger F, Drenkow J, Zaleski C, Jha S, Batut P, Chaisson M, Gingeras TR: STAR: Ultrafast universal RNA-seq aligner. Bioinformatics 29: 15-21, 2013
-
(2013)
Bioinformatics
, vol.29
, pp. 15-21
-
-
Dobin, A.1
Davis, C.A.2
Schlesinger, F.3
Drenkow, J.4
Zaleski, C.5
Jha, S.6
Batut, P.7
Chaisson, M.8
Gingeras, T.R.9
-
40
-
-
77952567987
-
Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required formacrophage and B cell identities
-
Heinz S, Benner C, Spann N, Bertolino E, Lin YC, Laslo P, Cheng JX, Murre C, Singh H, Glass CK: Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required formacrophage and B cell identities. Mol Cell 38: 576-589, 2010
-
(2010)
Mol Cell
, vol.38
, pp. 576-589
-
-
Heinz, S.1
Benner, C.2
Spann, N.3
Bertolino, E.4
Lin, Y.C.5
Laslo, P.6
Cheng, J.X.7
Murre, C.8
Singh, H.9
Glass, C.K.10
-
41
-
-
84879692466
-
Comparative analysis of RNA sequencing methods for degraded or low-input samples
-
Adiconis X, Borges-Rivera D, Satija R, DeLuca DS, Busby MA, Berlin AM, Sivachenko A, Thompson DA, Wysoker A, Fennell T, Gnirke A, Pochet N, Regev A, Levin JZ: Comparative analysis of RNA sequencing methods for degraded or low-input samples. Nat Methods 10: 623 629, 2013
-
(2013)
Nat Methods
, vol.10
, pp. 623-629
-
-
Adiconis, X.1
Borges-Rivera, D.2
Satija, R.3
DeLuca, D.S.4
Busby, M.A.5
Berlin, A.M.6
Sivachenko, A.7
Thompson, D.A.8
Wysoker, A.9
Fennell, T.10
Gnirke, A.11
Pochet, N.12
Regev, A.13
Levin, J.Z.14
|