-
1
-
-
84865173853
-
Dynamics of inherently bounded histone modification domains
-
Hodges C, Crabtree GR. Dynamics of inherently bounded histone modification domains. Proc Natl Acad Sci U S A. 2012;109:13296-301.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 13296-13301
-
-
Hodges, C.1
Crabtree, G.R.2
-
3
-
-
84896784289
-
The top-down, middle-down, and bottom-up mass spectrometry approaches for characterization of histone variants and their post-translational modifications
-
Moradian A, Kalli A, Sweredoski MJ, Hess S. The top-down, middle-down, and bottom-up mass spectrometry approaches for characterization of histone variants and their post-translational modifications. Proteomics. 2014;14:489-97.
-
(2014)
Proteomics
, vol.14
, pp. 489-497
-
-
Moradian, A.1
Kalli, A.2
Sweredoski, M.J.3
Hess, S.4
-
4
-
-
79958292800
-
Profiling epigenetic alterations in disease
-
Martin-Subero JI, Esteller M. Profiling epigenetic alterations in disease. Adv Exp Med Biol. 2011;711:162-77.
-
(2011)
Adv Exp Med Biol
, vol.711
, pp. 162-177
-
-
Martin-Subero, J.I.1
Esteller, M.2
-
5
-
-
84881101642
-
Combining genomic and proteomic approaches for epigenetics research
-
Han Y, Garcia BA. Combining genomic and proteomic approaches for epigenetics research. Epigenomics. 2013;5:439-52.
-
(2013)
Epigenomics
, vol.5
, pp. 439-452
-
-
Han, Y.1
Garcia, B.A.2
-
6
-
-
84904604801
-
Histones and their modifications in ovarian cancer - drivers of disease and therapeutic targets
-
Marsh DJ, Shah JS, Cole AJ. Histones and their modifications in ovarian cancer - drivers of disease and therapeutic targets. Front Oncol. 2014;4:144.
-
(2014)
Front Oncol
, vol.4
, pp. 144
-
-
Marsh, D.J.1
Shah, J.S.2
Cole, A.J.3
-
7
-
-
84879101770
-
Epigenetics in sepsis: targeting histone deacetylases
-
Ciarlo E, Savva A, Roger T. Epigenetics in sepsis: targeting histone deacetylases. Int J Antimicrob Agents. 2013;42(Suppl):S8-12.
-
(2013)
Int J Antimicrob Agents
, vol.42
, pp. S8-12
-
-
Ciarlo, E.1
Savva, A.2
Roger, T.3
-
10
-
-
84873743410
-
M1 and M2 macrophages: oracles of health and disease
-
Mills CD. M1 and M2 macrophages: oracles of health and disease. Crit Rev Immunol. 2012;32:463-88.
-
(2012)
Crit Rev Immunol
, vol.32
, pp. 463-488
-
-
Mills, C.D.1
-
11
-
-
84883292453
-
Effects of interactions between intestinal microbiota and intestinal macrophages on health
-
Nakata K, Yamamoto M, Inagawa H, Soma G. Effects of interactions between intestinal microbiota and intestinal macrophages on health. Anticancer Res. 2013;33:2849-53.
-
(2013)
Anticancer Res
, vol.33
, pp. 2849-2853
-
-
Nakata, K.1
Yamamoto, M.2
Inagawa, H.3
Soma, G.4
-
12
-
-
33745855899
-
Human immunodeficiency virus-mononuclear phagocyte interactions: emerging avenues of biomarker discovery, modes of viral persistence and disease pathogenesis
-
Ciborowski P, Gendelman HE. Human immunodeficiency virus-mononuclear phagocyte interactions: emerging avenues of biomarker discovery, modes of viral persistence and disease pathogenesis. Curr HIV Res. 2006;4:279-91.
-
(2006)
Curr HIV Res
, vol.4
, pp. 279-291
-
-
Ciborowski, P.1
Gendelman, H.E.2
-
13
-
-
84877329134
-
Human dendritic cells subsets as targets and vectors for therapy
-
Klechevsky E, Banchereau J. Human dendritic cells subsets as targets and vectors for therapy. Ann N Y Acad Sci. 2013;1284:24-30.
-
(2013)
Ann N Y Acad Sci
, vol.1284
, pp. 24-30
-
-
Klechevsky, E.1
Banchereau, J.2
-
14
-
-
84894493425
-
Innate receptors for adaptive immunity
-
Michallet MC, Rota G, Maslowski K, Guarda G. Innate receptors for adaptive immunity. Curr Opin Microbiol. 2013;16(3):296-302.
-
(2013)
Curr Opin Microbiol
, vol.16
, Issue.3
, pp. 296-302
-
-
Michallet, M.C.1
Rota, G.2
Maslowski, K.3
Guarda, G.4
-
15
-
-
84884193109
-
Early inflammatory processes in the skin
-
Stamatas GN, Morello 3rd AP, Mays DA. Early inflammatory processes in the skin. Curr Mol Med. 2013;13(8):1250-69.
-
(2013)
Curr Mol Med
, vol.13
, Issue.8
, pp. 1250-1269
-
-
Stamatas, G.N.1
Morello, A.P.2
Mays, D.A.3
-
16
-
-
84871241311
-
Immune-neural connections: how the immune system's response to infectious agents influences behavior
-
McCusker RH, Kelley KW. Immune-neural connections: how the immune system's response to infectious agents influences behavior. J Exp Biol. 2013;216:84-98.
-
(2013)
J Exp Biol
, vol.216
, pp. 84-98
-
-
McCusker, R.H.1
Kelley, K.W.2
-
17
-
-
84870486222
-
Heterochromatin protein 1 gamma and IkappaB kinase alpha interdependence during tumour necrosis factor gene transcription elongation in activated macrophages
-
Thorne JL, Ouboussad L, Lefevre PF. Heterochromatin protein 1 gamma and IkappaB kinase alpha interdependence during tumour necrosis factor gene transcription elongation in activated macrophages. Nucleic Acids Res. 2012;40:7676-89.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 7676-7689
-
-
Thorne, J.L.1
Ouboussad, L.2
Lefevre, P.F.3
-
19
-
-
84878039547
-
Epigenetic control of cytokine gene expression: regulation of the TNF/LT locus and T helper cell differentiation
-
Falvo JV, Jasenosky LD, Kruidenier L, Goldfeld AE. Epigenetic control of cytokine gene expression: regulation of the TNF/LT locus and T helper cell differentiation. Adv Immunol. 2013;118:37-128.
-
(2013)
Adv Immunol
, vol.118
, pp. 37-128
-
-
Falvo, J.V.1
Jasenosky, L.D.2
Kruidenier, L.3
Goldfeld, A.E.4
-
20
-
-
82055171836
-
Human native lipoprotein-induced de novo DNA methylation is associated with repression of inflammatory genes in THP-1 macrophages
-
Rangel-Salazar R, Wickstrom-Lindholm M, Aguilar-Salinas CA, Alvarado-Caudillo Y, Dossing KB, Esteller M, et al. Human native lipoprotein-induced de novo DNA methylation is associated with repression of inflammatory genes in THP-1 macrophages. BMC Genomics. 2011;12:582.
-
(2011)
BMC Genomics
, vol.12
, pp. 582
-
-
Rangel-Salazar, R.1
Wickstrom-Lindholm, M.2
Aguilar-Salinas, C.A.3
Alvarado-Caudillo, Y.4
Dossing, K.B.5
Esteller, M.6
-
21
-
-
33749597440
-
Purification and characterization of C-terminal truncated forms of histone H2A in monocytic THP-1 cells
-
Minami J, Takada K, Aoki K, Shimada Y, Okawa Y, Usui N, et al. Purification and characterization of C-terminal truncated forms of histone H2A in monocytic THP-1 cells. Int J Biochem Cell Biol. 2007;39:171-80.
-
(2007)
Int J Biochem Cell Biol
, vol.39
, pp. 171-180
-
-
Minami, J.1
Takada, K.2
Aoki, K.3
Shimada, Y.4
Okawa, Y.5
Usui, N.6
-
22
-
-
84857175772
-
Anti-inflammatory effect of 2-methoxy-4-vinylphenol via the suppression of NF-kappaB and MAPK activation, and acetylation of histone H3
-
Jeong JB, Hong SC, Jeong HJ, Koo JS. Anti-inflammatory effect of 2-methoxy-4-vinylphenol via the suppression of NF-kappaB and MAPK activation, and acetylation of histone H3. Arch Pharm Res. 2011;34:2109-16.
-
(2011)
Arch Pharm Res
, vol.34
, pp. 2109-2116
-
-
Jeong, J.B.1
Hong, S.C.2
Jeong, H.J.3
Koo, J.S.4
-
23
-
-
34248577604
-
Chemical derivatization of histones for facilitated analysis by mass spectrometry
-
Garcia BA, Mollah S, Ueberheide BM, Busby SA, Muratore TL, Shabanowitz J, et al. Chemical derivatization of histones for facilitated analysis by mass spectrometry. Nat Protoc. 2007;2:933-8.
-
(2007)
Nat Protoc
, vol.2
, pp. 933-938
-
-
Garcia, B.A.1
Mollah, S.2
Ueberheide, B.M.3
Busby, S.A.4
Muratore, T.L.5
Shabanowitz, J.6
-
24
-
-
0141995062
-
Chromatin history: our view from the bridge
-
Olins DE, Olins AL. Chromatin history: our view from the bridge. Nat Rev Mol Cell Biol. 2003;4:809-14.
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 809-814
-
-
Olins, D.E.1
Olins, A.L.2
-
25
-
-
84873669903
-
Elucidating combinatorial histone modifications and crosstalks by coupling histone-modifying enzyme with biotin ligase activity
-
Lau PN, Cheung P. Elucidating combinatorial histone modifications and crosstalks by coupling histone-modifying enzyme with biotin ligase activity. Nucleic Acids Res. 2013;41:e49.
-
(2013)
Nucleic Acids Res
, vol.41
-
-
Lau, P.N.1
Cheung, P.2
-
26
-
-
84865337735
-
Examining histone posttranslational modification patterns by high-resolution mass spectrometry
-
Lin S, Garcia BA. Examining histone posttranslational modification patterns by high-resolution mass spectrometry. Methods Enzymol. 2012;512:3-28.
-
(2012)
Methods Enzymol
, vol.512
, pp. 3-28
-
-
Lin, S.1
Garcia, B.A.2
-
27
-
-
79251565240
-
Histone variants and their post-translational modifications in primary human fat cells
-
Jufvas A, Stralfors P, Vener AV. Histone variants and their post-translational modifications in primary human fat cells. PLoS One. 2011;6:e15960.
-
(2011)
PLoS One
, vol.6
-
-
Jufvas, A.1
Stralfors, P.2
Vener, A.V.3
-
28
-
-
84877010679
-
Pressure-assisted sample preparation for proteomic analysis
-
Olszowy PP, Burns A, Ciborowski PS. Pressure-assisted sample preparation for proteomic analysis. Anal Biochem. 2013;438:67-72.
-
(2013)
Anal Biochem
, vol.438
, pp. 67-72
-
-
Olszowy, P.P.1
Burns, A.2
Ciborowski, P.S.3
-
29
-
-
84884400938
-
Comparing and combining CE-ESI-MS and nano-LC-ESI-MS for the characterization of post-translationally modified histones
-
Sarg B, Faserl K, Kremser L, Halfinger B, Sebastiano R, Lindner HH. Comparing and combining CE-ESI-MS and nano-LC-ESI-MS for the characterization of post-translationally modified histones. Mol Cell Proteomics. 2013;12(9):2640-56.
-
(2013)
Mol Cell Proteomics
, vol.12
, Issue.9
, pp. 2640-2656
-
-
Sarg, B.1
Faserl, K.2
Kremser, L.3
Halfinger, B.4
Sebastiano, R.5
Lindner, H.H.6
-
30
-
-
39549119366
-
Separation of histone variants and post-translationally modified isoforms by triton/acetic acid/urea polyacrylamide gel electrophoresis
-
Chapter 21, Unit 21.2
-
Ryan CA, Annunziato AT. Separation of histone variants and post-translationally modified isoforms by triton/acetic acid/urea polyacrylamide gel electrophoresis. Curr Protoc Mol Biol. 2001;Chapter 21:Unit 21.2.
-
(2001)
Curr Protoc Mol Biol
-
-
Ryan, C.A.1
Annunziato, A.T.2
-
31
-
-
84875787565
-
Data-dependent middle-down nano-liquid chromatography-electron capture dissociation-tandem mass spectrometry: an application for the analysis of unfractionated histones
-
Kalli A, Sweredoski MJ, Hess S. Data-dependent middle-down nano-liquid chromatography-electron capture dissociation-tandem mass spectrometry: an application for the analysis of unfractionated histones. Anal Chem. 2013;85:3501-7.
-
(2013)
Anal Chem
, vol.85
, pp. 3501-3507
-
-
Kalli, A.1
Sweredoski, M.J.2
Hess, S.3
-
32
-
-
41149159170
-
Complications in the assignment of 14 and 28Da mass shift detected by mass spectrometry as in vivo methylation from endogenous proteins
-
Jung SY, Li Y, Wang Y, Chen Y, Zhao Y, Qin J. Complications in the assignment of 14 and 28Da mass shift detected by mass spectrometry as in vivo methylation from endogenous proteins. Anal Chem. 2008;80:1721-9.
-
(2008)
Anal Chem
, vol.80
, pp. 1721-1729
-
-
Jung, S.Y.1
Li, Y.2
Wang, Y.3
Chen, Y.4
Zhao, Y.5
Qin, J.6
-
33
-
-
70350580560
-
Changes in allele-specific association of histone modifications at the imprinting control regions during mouse preimplantation development
-
Kim JM, Ogura A. Changes in allele-specific association of histone modifications at the imprinting control regions during mouse preimplantation development. Genesis. 2009;47:611-6.
-
(2009)
Genesis
, vol.47
, pp. 611-616
-
-
Kim, J.M.1
Ogura, A.2
-
34
-
-
33646265537
-
Limited evolutionary conservation of imprinting in the human placenta
-
Monk D, Arnaud P, Apostolidou S, Hills FA, Kelsey G, Stanier P, et al. Limited evolutionary conservation of imprinting in the human placenta. Proc Natl Acad Sci U S A. 2006;103:6623-8.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 6623-6628
-
-
Monk, D.1
Arnaud, P.2
Apostolidou, S.3
Hills, F.A.4
Kelsey, G.5
Stanier, P.6
-
35
-
-
84861163510
-
Lysine succinylation and lysine malonylation in histones
-
Xie Z, Dai J, Dai L, Tan M, Cheng Z, Wu Y, et al. Lysine succinylation and lysine malonylation in histones. Mol Cell Proteomics. 2012;11:100-7.
-
(2012)
Mol Cell Proteomics
, vol.11
, pp. 100-107
-
-
Xie, Z.1
Dai, J.2
Dai, L.3
Tan, M.4
Cheng, Z.5
Wu, Y.6
-
36
-
-
79953903096
-
Mass spectrometric studies on epigenetic interaction networks in cell differentiation
-
Xiong L, Darwanto A, Sharma S, Herring J, Hu S, Filippova M, et al. Mass spectrometric studies on epigenetic interaction networks in cell differentiation. J Biol Chem. 2011;286:13657-68.
-
(2011)
J Biol Chem
, vol.286
, pp. 13657-13668
-
-
Xiong, L.1
Darwanto, A.2
Sharma, S.3
Herring, J.4
Hu, S.5
Filippova, M.6
-
37
-
-
85025402749
-
Studies on the propagation in vitro of poliomyelitis viruses. IV. Viral multiplication in a stable strain of human malignant epithelial cells (strain HeLa) derived from an epidermoid carcinoma of the cervix
-
Scherer WF, Syverton JT, Gey GO. Studies on the propagation in vitro of poliomyelitis viruses. IV. Viral multiplication in a stable strain of human malignant epithelial cells (strain HeLa) derived from an epidermoid carcinoma of the cervix. J Exp Med. 1953;97:695-710.
-
(1953)
J Exp Med
, vol.97
, pp. 695-710
-
-
Scherer, W.F.1
Syverton, J.T.2
Gey, G.O.3
-
38
-
-
84883242404
-
Differences in specificity and selectivity between CBP and p300 acetylation of histone H3 and H3/H4
-
Henry RA, Kuo YM, Andrews AJ. Differences in specificity and selectivity between CBP and p300 acetylation of histone H3 and H3/H4. Biochemistry. 2013;52:5746-59.
-
(2013)
Biochemistry
, vol.52
, pp. 5746-5759
-
-
Henry, R.A.1
Kuo, Y.M.2
Andrews, A.J.3
-
39
-
-
0033556404
-
Overlapping but distinct patterns of histone acetylation by the human coactivators p300 and PCAF within nucleosomal substrates
-
Schiltz RL, Mizzen CA, Vassilev A, Cook RG, Allis CD, Nakatani Y. Overlapping but distinct patterns of histone acetylation by the human coactivators p300 and PCAF within nucleosomal substrates. J Biol Chem. 1999;274:1189-92.
-
(1999)
J Biol Chem
, vol.274
, pp. 1189-1192
-
-
Schiltz, R.L.1
Mizzen, C.A.2
Vassilev, A.3
Cook, R.G.4
Allis, C.D.5
Nakatani, Y.6
-
40
-
-
0015501421
-
Studies of histone methylation during the HeLa S-3 cell cycle
-
Borun TW, Pearson D, Paik WK. Studies of histone methylation during the HeLa S-3 cell cycle. J Biol Chem. 1972;247:4288-98.
-
(1972)
J Biol Chem
, vol.247
, pp. 4288-4298
-
-
Borun, T.W.1
Pearson, D.2
Paik, W.K.3
-
41
-
-
0020557253
-
Is the onset of actin histidine methylation under development control in the chick embryo
-
Cass KA, Clark EB, Rubenstein PA. Is the onset of actin histidine methylation under development control in the chick embryo. Arch Biochem Biophys. 1983;225:731-9.
-
(1983)
Arch Biochem Biophys
, vol.225
, pp. 731-739
-
-
Cass, K.A.1
Clark, E.B.2
Rubenstein, P.A.3
-
42
-
-
0019123690
-
Chromatographic isolation and identification of methylated derivatives obtained from modified fibrinogen
-
Osbahr AJ. Chromatographic isolation and identification of methylated derivatives obtained from modified fibrinogen. Biomaterials. 1980;1:183-8.
-
(1980)
Biomaterials
, vol.1
, pp. 183-188
-
-
Osbahr, A.J.1
-
43
-
-
84855882543
-
Proteomic tools for the investigation of human hair structural proteins and evidence of weakness sites on hair keratin coil segments
-
Barthelemy NR, Bednarczyk A, Schaeffer-Reiss C, Jullien D, Van Dorsselaer A, Cavusoglu N. Proteomic tools for the investigation of human hair structural proteins and evidence of weakness sites on hair keratin coil segments. Anal Biochem. 2012;421:43-55.
-
(2012)
Anal Biochem
, vol.421
, pp. 43-55
-
-
Barthelemy, N.R.1
Bednarczyk, A.2
Schaeffer-Reiss, C.3
Jullien, D.4
Dorsselaer, A.5
Cavusoglu, N.6
-
44
-
-
78549293943
-
A novel 3-methylhistidine modification of yeast ribosomal protein Rpl3 is dependent upon the YIL110W methyltransferase
-
Webb KJ, Zurita-Lopez CI, Al-Hadid Q, Laganowsky A, Young BD, Lipson RS, et al. A novel 3-methylhistidine modification of yeast ribosomal protein Rpl3 is dependent upon the YIL110W methyltransferase. J Biol Chem. 2010;285:37598-606.
-
(2010)
J Biol Chem
, vol.285
, pp. 37598-37606
-
-
Webb, K.J.1
Zurita-Lopez, C.I.2
Al-Hadid, Q.3
Laganowsky, A.4
Young, B.D.5
Lipson, R.S.6
-
45
-
-
84886949555
-
Advances in purification and separation of posttranslationally modified proteins
-
Cerny M, Skalak J, Cerna H, Brzobohaty B. Advances in purification and separation of posttranslationally modified proteins. J Proteomics. 2013;92:2-27.
-
(2013)
J Proteomics
, vol.92
, pp. 2-27
-
-
Cerny, M.1
Skalak, J.2
Cerna, H.3
Brzobohaty, B.4
-
46
-
-
0020068620
-
Aberrant and nonrandom methylation of chromosomal DNA-binding proteins of colonic epithelial cells by 1,2-dimethylhydrazine
-
Boffa LC, Gruss RJ, Allfrey VG. Aberrant and nonrandom methylation of chromosomal DNA-binding proteins of colonic epithelial cells by 1,2-dimethylhydrazine. Cancer Res. 1982;42:382-8.
-
(1982)
Cancer Res
, vol.42
, pp. 382-388
-
-
Boffa, L.C.1
Gruss, R.J.2
Allfrey, V.G.3
-
47
-
-
0022263688
-
Methylating agents: their target amino acids in nuclear proteins
-
Boffa LC, Bolognesi C. Methylating agents: their target amino acids in nuclear proteins. Carcinogenesis. 1985;6:1399-401.
-
(1985)
Carcinogenesis
, vol.6
, pp. 1399-1401
-
-
Boffa, L.C.1
Bolognesi, C.2
-
48
-
-
38149098408
-
Histone H2A monoubiquitination represses transcription by inhibiting RNA polymerase II transcriptional elongation
-
Zhou W, Zhu P, Wang J, Pascual G, Ohgi KA, Lozach J, et al. Histone H2A monoubiquitination represses transcription by inhibiting RNA polymerase II transcriptional elongation. Mol Cell. 2008;29:69-80.
-
(2008)
Mol Cell
, vol.29
, pp. 69-80
-
-
Zhou, W.1
Zhu, P.2
Wang, J.3
Pascual, G.4
Ohgi, K.A.5
Lozach, J.6
-
49
-
-
0024505572
-
Ubiquitinated histone H2B is preferentially located in transcriptionally active chromatin
-
Nickel BE, Allis CD, Davie JR. Ubiquitinated histone H2B is preferentially located in transcriptionally active chromatin. Biochemistry. 1989;28:958-63.
-
(1989)
Biochemistry
, vol.28
, pp. 958-963
-
-
Nickel, B.E.1
Allis, C.D.2
Davie, J.R.3
-
50
-
-
77954370179
-
A modified "cross-talk" between histone H2B Lys-120 ubiquitination and H3 Lys-79 methylation
-
Darwanto A, Curtis MP, Schrag M, Kirsch W, Liu P, Xu G, et al. A modified "cross-talk" between histone H2B Lys-120 ubiquitination and H3 Lys-79 methylation. J Biol Chem. 2010;285:21868-76.
-
(2010)
J Biol Chem
, vol.285
, pp. 21868-21876
-
-
Darwanto, A.1
Curtis, M.P.2
Schrag, M.3
Kirsch, W.4
Liu, P.5
Xu, G.6
-
51
-
-
4444372638
-
Histone deimination antagonizes arginine methylation
-
Cuthbert GL, Daujat S, Snowden AW, Erdjument-Bromage H, Hagiwara T, Yamada M, et al. Histone deimination antagonizes arginine methylation. Cell. 2004;118:545-53.
-
(2004)
Cell
, vol.118
, pp. 545-553
-
-
Cuthbert, G.L.1
Daujat, S.2
Snowden, A.W.3
Erdjument-Bromage, H.4
Hagiwara, T.5
Yamada, M.6
|