메뉴 건너뛰기




Volumn 10, Issue 7, 2015, Pages

Mitochondrial genome supports sibling species of Angiostrongylus costaricensis (Nematoda: Angiostrongylidae)

Author keywords

[No Author keywords available]

Indexed keywords

ANGIOSTRONGYLUS COSTARICENSIS; ARTICLE; BRAZIL; CONTROLLED STUDY; COSTA RICA; DNA SEQUENCE; GENETIC DIFFERENCE; GENETIC DISTANCE; GENETIC VARIABILITY; GENOME SIZE; MITOCHONDRIAL GENOME; NEXT GENERATION SEQUENCING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PHYLOGENY; RNA STRUCTURE; SIBLING; STOP CODON; TAXON; ANGIOSTRONGYLUS; ANIMAL; CLASSIFICATION; GENETICS;

EID: 84941985382     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0134581     Document Type: Article
Times cited : (20)

References (41)
  • 2
    • 84889073259 scopus 로고    scopus 로고
    • Angiostrongyliasis in the Americas
    • Lorenzo-Morales J (ed.) Rijeka, Croatia: InTech
    • Maldonado A Jr, Simões R, Thiengo S. Angiostrongyliasis in the Americas. In: Lorenzo-Morales J (ed.) Zoonosis 12: 303-320. Rijeka, Croatia: InTech, 2012.
    • (2012) Zoonosis , vol.12 , pp. 303-320
    • Maldonado, A.1    Simões, R.2    Thiengo, S.3
  • 4
    • 0014815033 scopus 로고
    • Angiostrongylus costaricensis n. SP. (Nematoda: Metastrongyloidea), a new lungworm occurring in man in Costa Rica
    • Morera P, Céspedes R. Angiostrongylus costaricensis n. sp. (Nematoda: Metastrongyloidea), a new lungworm occurring in man in Costa Rica. Rev. Biol. Trop. 1971; 18: 173-185.
    • (1971) Rev. Biol. Trop. , vol.18 , pp. 173-185
    • Morera, P.1    Céspedes, R.2
  • 6
    • 66449109779 scopus 로고    scopus 로고
    • Update on eosinophilic meningoencephalitis and its clinical relevance
    • 19366917
    • Graeff-Teixeira C, da Silva ACA, Yoshimura K. Update on eosinophilic meningoencephalitis and its clinical relevance. Clin Microbiol Rev. 2009; 22: 322-348. doi: 10.1128/CMR.00044-08 PMID: 19366917
    • (2009) Clin Microbiol Rev. , vol.22 , pp. 322-348
    • Graeff-Teixeira, C.1    Da Silva, A.C.A.2    Yoshimura, K.3
  • 9
    • 0029401879 scopus 로고
    • Angiostrongylus costaricensis life cycle: A new proposal
    • 8731366
    • Mota EM, Lenzi HL. Angiostrongylus costaricensis life cycle: a new proposal. Mem Inst Oswaldo Cruz 1995; 90: 707-9. PMID: 8731366
    • (1995) Mem Inst Oswaldo Cruz , vol.90 , pp. 707-709
    • Mota, E.M.1    Lenzi, H.L.2
  • 10
    • 23944442211 scopus 로고    scopus 로고
    • Angiostrongylus costaricensis: Complete redescription of the migratory pathways based on experimental Sigmodon hispidus infection
    • 16113890
    • Mota EM, Lenzi HL. Angiostrongylus costaricensis: complete redescription of the migratory pathways based on experimental Sigmodon hispidus infection. Mem Inst Oswaldo Cruz 2005; 100: 407-20. PMID: 16113890
    • (2005) Mem Inst Oswaldo Cruz , vol.100 , pp. 407-420
    • Mota, E.M.1    Lenzi, H.L.2
  • 11
    • 0015900679 scopus 로고
    • Life history and redescription of Angiostrongylus costaricensis Morera and Céspedes, 1971
    • 4729741
    • Morera P. Life history and redescription of Angiostrongylus costaricensis Morera and Céspedes, 1971. Am J Trop Med Hyg 1973; 22: 613-21. PMID: 4729741
    • (1973) Am J Trop Med Hyg , vol.22 , pp. 613-621
    • Morera, P.1
  • 12
    • 77956480929 scopus 로고    scopus 로고
    • Molecular differentiation of Angiostrongylus taxa (Nematoda: Angiostrongylidae) by cytochrome c oxidase subunit I (COI) gene sequences
    • 20654571
    • Eamsobhana P, Lim PE, Solano G, Zhang H, Gan X, Yong HS. Molecular differentiation of Angiostrongylus taxa (Nematoda: Angiostrongylidae) by cytochrome c oxidase subunit I (COI) gene sequences. Acta Trop. 2010; 116: 152-156. doi: 10.1016/j.actatropica.2010.07.005 PMID: 20654571
    • (2010) Acta Trop. , vol.116 , pp. 152-156
    • Eamsobhana, P.1    Lim, P.E.2    Solano, G.3    Zhang, H.4    Gan, X.5    Yong, H.S.6
  • 13
    • 58749112387 scopus 로고    scopus 로고
    • Angiostrongylus vasorum from South America and Europe represent distinct lineages
    • 19126274
    • Jefferies R, Shaw SE, Viney ME, Morgan ER. Angiostrongylus vasorum from South America and Europe represent distinct lineages. Parasitology. 2009; 136: 107-115. doi: 10.1017/S0031182008005258 PMID: 19126274
    • (2009) Parasitology , vol.136 , pp. 107-115
    • Jefferies, R.1    Shaw, S.E.2    Viney, M.E.3    Morgan, E.R.4
  • 14
    • 84862757623 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the rodent intra-arterial nematodes Angiostrongylus cantonensis and Angiostrongylus costaricensis
    • 22246368
    • Lv S, Zhang Y, Zhang L, Liu Q, Liu H-X, Hu L, et al. The complete mitochondrial genome of the rodent intra-arterial nematodes Angiostrongylus cantonensis and Angiostrongylus costaricensis. Parasitol Res. 2012; 111: 115-123. doi: 10.1007/s00436-011-2807-4 PMID: 22246368
    • (2012) Parasitol Res. , vol.111 , pp. 115-123
    • Lv, S.1    Zhang, Y.2    Zhang, L.3    Liu, Q.4    Liu, H.-X.5    Hu, L.6
  • 18
    • 79961109150 scopus 로고    scopus 로고
    • BLAST ring image generator (BRIG): Simple prokaryote genome comparisons
    • 21824423
    • Alikhan NF, Petty NK, Ben Zakour NL, Beatson SA. BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons. BMC Genomics. 2011; 12: 402. doi: 10.1186/1471-2164-12-402 PMID: 21824423
    • (2011) BMC Genomics , vol.12 , pp. 402
    • Alikhan, N.F.1    Petty, N.K.2    Ben Zakour, N.L.3    Beatson, S.A.4
  • 19
    • 0031574072 scopus 로고    scopus 로고
    • The clustalx windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl Acids Res. 1997; 24: 4876-4882.
    • (1997) Nucl Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 20
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser. 1999; 41: 95-98.
    • (1999) Nucl Acids Symp Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 21
    • 84875619226 scopus 로고    scopus 로고
    • MAFFT multiple sequence alignment software version 7: Improvements in performance and usability
    • 23329690
    • Katoh K, Standley DM. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in performance and usability. Mol Biol Evol. 2013; 30(4): 772-780. doi: 10.1093/molbev/mst010 PMID: 23329690
    • (2013) Mol Biol Evol. , vol.30 , Issue.4 , pp. 772-780
    • Katoh, K.1    Standley, D.M.2
  • 22
    • 35848948382 scopus 로고    scopus 로고
    • Kakusan: A computer program to automate the selection of a nucleotide substitution model and the configuration of a mixed model on multilocus data
    • Tanabe AS. Kakusan: a computer program to automate the selection of a nucleotide substitution model and the configuration of a mixed model on multilocus data. Mol Ecol Notes. 2007; 7: 962-964.
    • (2007) Mol Ecol Notes , vol.7 , pp. 962-964
    • Tanabe, A.S.1
  • 23
    • 0000501656 scopus 로고
    • Information theory and an extension of the maximum likelihood principle
    • Petrov BN, Csaki F (eds.) Budapest: Akademia Kiado
    • Akaike H. Information Theory and an Extension of the Maximum Likelihood Principle. In: Petrov BN, Csaki F (eds.) Proceedings of the 2nd International Symposium on Information Theory pp. 267-281. Budapest: Akademia Kiado, 1973.
    • (1973) Proceedings of the 2nd International Symposium on Information Theory , pp. 267-281
    • Akaike, H.1
  • 24
    • 0000120766 scopus 로고
    • Estimating the dimension of a model
    • Schwarz G. Estimating the dimension of a model. Ann Stat. 1978; 6: 461-464.
    • (1978) Ann Stat. , vol.6 , pp. 461-464
    • Schwarz, G.1
  • 25
    • 13444259388 scopus 로고    scopus 로고
    • Treefinder: A powerful graphical analysis environment for molecular phylogenetics
    • 15222900
    • Jobb G, von Haeseler A, Strimmer K. Treefinder: a powerful graphical analysis environment for molecular phylogenetics. BMC Evol Biol. 2004; 4: 18. PMID: 15222900
    • (2004) BMC Evol Biol. , vol.4 , pp. 18
    • Jobb, G.1    Von Haeseler, A.2    Strimmer, K.3
  • 26
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogenetic trees
    • 11524383
    • Huelsenbeck JP, Ronquist F. MrBayes: Bayesian Inference of phylogenetic trees. Bioinformatics. 2001; 17: 754-755. PMID: 11524383
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 27
    • 84877778167 scopus 로고    scopus 로고
    • (version 1.4.0).
    • Rambaut A. FigTree (version 1.4.0). Available at http://tree.bio.ed.ac.uk/software/figtree/(2012).
    • (2012) FigTree
    • Rambaut, A.1
  • 28
    • 31344441049 scopus 로고    scopus 로고
    • Mitochondrial genomes of parasitic nematodes-progress and perspectives
    • 16377245
    • Hu M, Gasser RB. Mitochondrial genomes of parasitic nematodes-progress and perspectives. Trends Parasitol. 2006; 22(2): 78-84. PMID: 16377245
    • (2006) Trends Parasitol. , vol.22 , Issue.2 , pp. 78-84
    • Hu, M.1    Gasser, R.B.2
  • 29
    • 79955858253 scopus 로고    scopus 로고
    • Ramppant gene rearrangement and haplotype hypervariation among nematode mitochondrial genomes
    • 21136141
    • Hyman BC, Lewis SC, Tang S, Wu Z. Ramppant gene rearrangement and haplotype hypervariation among nematode mitochondrial genomes. Genetica. 2011; 139: 611-615. doi: 10.1007/s10709-010-9531-3 PMID: 21136141
    • (2011) Genetica , vol.139 , pp. 611-615
    • Hyman, B.C.1    Lewis, S.C.2    Tang, S.3    Wu, Z.4
  • 30
    • 79960977751 scopus 로고    scopus 로고
    • Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences
    • 21813000
    • Park J-K, Sultana T, Lee S-H, Kang S, Kim SK, Min G-S, et al. Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences. BMC Genomics. 2011; 12: 392. doi: 10.1186/1471-2164-12-392 PMID: 21813000
    • (2011) BMC Genomics , vol.12 , pp. 392
    • Park, J.-K.1    Sultana, T.2    Lee, S.-H.3    Kang, S.4    Kim, S.K.5    Min, G.-S.6
  • 31
    • 84868122848 scopus 로고    scopus 로고
    • Mitochondrial genome of Angiostrongylus vasorum: Comparison with congeners and implications for studying the population genetics and epidemiology of this parasite
    • 22922297
    • Gasser RB, Jabbar A, Mohandas N, Schnyder M, Deplazes P, Littlewood DTJ, et al. Mitochondrial genome of Angiostrongylus vasorum: Comparison with congeners and implications for studying the population genetics and epidemiology of this parasite. Infect Genet Evol. 2012; 12: 1884-1891. doi: 10.1016/j.meegid.2012.07.022 PMID: 22922297
    • (2012) Infect Genet Evol. , vol.12 , pp. 1884-1891
    • Gasser, R.B.1    Jabbar, A.2    Mohandas, N.3    Schnyder, M.4    Deplazes, P.5    Littlewood, D.T.J.6
  • 32
    • 84862187635 scopus 로고    scopus 로고
    • Comparing the mitochondrial genomes of Wolbachia-dependent and independent filarial nematode species
    • 22530989
    • McNulty SN, Mullin AS, Vaughan JA, Tkach VV, Weil GJ, Fischer PU. Comparing the mitochondrial genomes of Wolbachia-dependent and independent filarial nematode species. BMC Genomics. 2012; 13: 145. doi: 10.1186/1471-2164-13-145 PMID: 22530989
    • (2012) BMC Genomics , vol.13 , pp. 145
    • McNulty, S.N.1    Mullin, A.S.2    Vaughan, J.A.3    Tkach, V.V.4    Weil, G.J.5    Fischer, P.U.6
  • 33
    • 84873723676 scopus 로고    scopus 로고
    • You are where you live: Parasitic nematode mitochondrial genome size is associated with the thermal environment generated by hosts
    • 23286296
    • Lagisz M, Poulin R, Nakagawa S. You are where you live: parasitic nematode mitochondrial genome size is associated with the thermal environment generated by hosts. J Evol Biol. 2013; 26: 683-690. doi: 10.1111/jeb.12068 PMID: 23286296
    • (2013) J Evol Biol. , vol.26 , pp. 683-690
    • Lagisz, M.1    Poulin, R.2    Nakagawa, S.3
  • 34
    • 84899467963 scopus 로고    scopus 로고
    • Mitochondrial genomes of Meloidogyne chitwoodi and M. Incognita (Nematoda: Telenchina): Comparative analysis, gene order and phylogenetic relationships with other nematodes
    • Humphreys-Pereira DA, Elling AA. Mitochondrial genomes of Meloidogyne chitwoodi and M. incognita (Nematoda: Telenchina): Comparative analysis, gene order and phylogenetic relationships with other nematodes. Mol Bioch Parasitol. 2014; 194: 20-32.
    • (2014) Mol Bioch Parasitol , vol.194 , pp. 20-32
    • Humphreys-Pereira, D.A.1    Elling, A.A.2
  • 35
    • 84925405931 scopus 로고    scopus 로고
    • Species of angiostrongylus (Nematoda: Metastrongyloidea) in wildlife: A review
    • Spratt DM. Species of Angiostrongylus (Nematoda: Metastrongyloidea) in wildlife: A review. Int J Parasitol: Parasites and Wildlife. 2015; doi: 10.1016/j.ijppaw.2015.02.006
    • (2015) Int J Parasitol: Parasites and Wildlife
    • Spratt, D.M.1
  • 36
    • 84901379444 scopus 로고    scopus 로고
    • Comparative analysis of mitochondrial genomes of Angiostrongylus cantonensis
    • (article in Chinese)
    • Lv S, Zhang Y, Guo Y-H, Liu H-X, Zhou Z-B, Jiang M, et al. Comparative analysis of mitochondrial genomes of Angiostrongylus cantonensis. Chin J Schisto Control. 2014; 26(2): 175-179. (article in Chinese)
    • (2014) Chin J Schisto Control , vol.26 , Issue.2 , pp. 175-179
    • Lv, S.1    Zhang, Y.2    Guo, Y.-H.3    Liu, H.-X.4    Zhou, Z.-B.5    Jiang, M.6
  • 37
    • 84873266823 scopus 로고    scopus 로고
    • The mitochondrial genome of Aelurostrongylus abstrusus-diagnostic, epidemiological and systematic implications
    • 23142387
    • Jabbar A, Jex AR, Mohandas N, Hall RS, Littlewood DTJ, Gasser RB. The mitochondrial genome of Aelurostrongylus abstrusus-diagnostic, epidemiological and systematic implications. Gene. 2013; 516: 294-300. doi: 10.1016/j.gene.2012.10.072 PMID: 23142387
    • (2013) Gene , vol.516 , pp. 294-300
    • Jabbar, A.1    Jex, A.R.2    Mohandas, N.3    Hall, R.S.4    Littlewood, D.T.J.5    Gasser, R.B.6
  • 38
    • 0019444843 scopus 로고
    • TRNA punctuation model of RNA processing in human mitochondria
    • 7219536
    • Ojala D, Montoya J, Attardi G. tRNA punctuation model of RNA processing in human mitochondria. Nature. 1981; 290: 470-474. PMID: 7219536
    • (1981) Nature , vol.290 , pp. 470-474
    • Ojala, D.1    Montoya, J.2    Attardi, G.3
  • 39
    • 77956487702 scopus 로고    scopus 로고
    • Molecular differentiation and phylogenetic relationships of three Angiostrongylus species and Angiostrongylus cantonensis geographical isolates based on a 66-kDa protein gene of A. Cantonensis (Nematoda: Angiostrongylidae)
    • 20566366
    • Eamsobhana P, Lim PE, Zhang H, Gan X, Yong HS. Molecular differentiation and phylogenetic relationships of three Angiostrongylus species and Angiostrongylus cantonensis geographical isolates based on a 66-kDa protein gene of A. cantonensis (Nematoda: Angiostrongylidae). Exp Parasitol. 2010; 126: 564-569. doi: 10.1016/j.exppara.2010.06.001 PMID: 20566366
    • (2010) Exp Parasitol , vol.126 , pp. 564-569
    • Eamsobhana, P.1    Lim, P.E.2    Zhang, H.3    Gan, X.4    Yong, H.S.5
  • 40
    • 84929472756 scopus 로고    scopus 로고
    • Molecular phylogeography of Angiostrongylus cantonensis (Nematoda:Angiostrongylidae) and genetic relationships with congeners usingcytochrome b gene marker
    • 25930187
    • Yong H-S, Eamsobhana P, Song S-L, Prasartvit A, Lim P-L. Molecular phylogeography of Angiostrongylus cantonensis (Nematoda:Angiostrongylidae) and genetic relationships with congeners usingcytochrome b gene marker. Acta Trop. 2015; 148: 66-71. doi: 10.1016/j.actatropica.2015.04.020 PMID: 25930187
    • (2015) Acta Trop , vol.148 , pp. 66-71
    • Yong, H.-S.1    Eamsobhana, P.2    Song, S.-L.3    Prasartvit, A.4    Lim, P.-L.5
  • 41
    • 47749120554 scopus 로고    scopus 로고
    • Phylogeography of the Rhabditis (Pellioditis) marina species complex: Evidence for long-distance dispersal, and for range expansions and restricted gene flow in the northeast Atlantic
    • 18573165
    • Derycke S, Remerie T, Backeljau T, Vierstraete A, Vanfleteren J, Vincx M, et al. Phylogeography of the Rhabditis (Pellioditis) marina species complex: evidence for long-distance dispersal, and for range expansions and restricted gene flow in the northeast Atlantic. Mol Ecol. 2008; 17: 3306-3322. doi: 10.1111/j.1365-294X.2008.03846.x PMID: 18573165
    • (2008) Mol Ecol. , vol.17 , pp. 3306-3322
    • Derycke, S.1    Remerie, T.2    Backeljau, T.3    Vierstraete, A.4    Vanfleteren, J.5    Vincx, M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.