-
1
-
-
84455161890
-
An enlarged, adaptable active site in CYP164 family P450 enzymes, the sole P450 in Mycobacterium leprae
-
Agnew CR, Warrilow AG, Burton NM, Lamb DC, Kelly SL, Brady RL. 2012. An enlarged, adaptable active site in CYP164 family P450 enzymes, the sole P450 in Mycobacterium leprae. Antimicrob. Agents Chemother. 56: 391-402.
-
(2012)
Antimicrob. Agents Chemother
, vol.56
, pp. 391-402
-
-
Agnew, C.R.1
Warrilow, A.G.2
Burton, N.M.3
Lamb, D.C.4
Kelly, S.L.5
Brady, R.L.6
-
2
-
-
33745911122
-
Class dependent sequence alignment strategy improves the structural and functional modeling of P450s
-
Baudry J, Rupasinghe S, Schuler MA. 2006. Class dependent sequence alignment strategy improves the structural and functional modeling of P450s. Protein Eng. Des. Selec. 19: 345-353.
-
(2006)
Protein Eng. Des. Selec
, vol.19
, pp. 345-353
-
-
Baudry, J.1
Rupasinghe, S.2
Schuler, M.A.3
-
3
-
-
0028794689
-
Cytochrome P450: Structure, function, and generation of reactive oxygen species
-
Bernhardt R. 1996. Cytochrome P450: structure, function, and generation of reactive oxygen species. Rev. Physiol. Biochem. Pharmacol. 127: 137-221.
-
(1996)
Rev. Physiol. Biochem. Pharmacol
, vol.127
, pp. 137-221
-
-
Bernhardt, R.1
-
4
-
-
84862212859
-
Homology modeling and docking studies of Streptomyces peucetius CYP147F1 as limonene hydroxylase
-
Bhattarai S, Liou K, Oh TJ. 2012. Homology modeling and docking studies of Streptomyces peucetius CYP147F1 as limonene hydroxylase. J. Microbiol. Biotechnol. 22: 917-922.
-
(2012)
J. Microbiol. Biotechnol
, vol.22
, pp. 917-922
-
-
Bhattarai, S.1
Liou, K.2
Oh, T.J.3
-
5
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
-
Brooks BR, Bruccoleri RE, Olafson BD, States DJ, Swaminathan S, Karplus M. 1983. CHARMM: a program for macromolecular energy, minimization, and dynamics calculations. J. Comp. Chem. 4: 187-217.
-
(1983)
J. Comp. Chem
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
6
-
-
84941891135
-
-
Discovery Studio 3.5, Accelrys Inc., San Diego, CA, USA
-
Discovery Studio 3.5. 2012. Accelrys Inc., San Diego, CA, USA. Available from http://www.accelrys.com.
-
(2012)
-
-
-
7
-
-
0029643786
-
Structure and function of cytochromes P450: A comparative analysis of three crystal structures
-
Hasemann CA, Kurumbail RG, Boddupalli SS, Peterson JA, Deisenhofer J. 1995. Structure and function of cytochromes P450: a comparative analysis of three crystal structures. Structure 3: 41-62.
-
(1995)
Structure
, vol.3
, pp. 41-62
-
-
Hasemann, C.A.1
Kurumbail, R.G.2
Boddupalli, S.S.3
Peterson, J.A.4
Deisenhofer, J.5
-
8
-
-
0030575194
-
Site-directed mutagenesis of human prostacyclin synthase: Alteration of Cys441 of the Cys pocket, and Glu347 and Arg350 of the ExxR motif
-
Hatae T, Hara S, Yokoyama C, Yabuki T, Inoue H, Ullrich V, Tanabe T. 1996. Site-directed mutagenesis of human prostacyclin synthase: alteration of Cys441 of the Cys pocket, and Glu347 and Arg350 of the ExxR motif. FEBS Lett. 389: 268-272.
-
(1996)
FEBS Lett
, vol.389
, pp. 268-272
-
-
Hatae, T.1
Hara, S.2
Yokoyama, C.3
Yabuki, T.4
Inoue, H.5
Ullrich, V.6
Tanabe, T.7
-
9
-
-
0026542989
-
Substrate recognition sites in cytochrome P450 family 2 (CYP2) proteins inferred from comparative analyses of amino acid and coding nucleotide sequences
-
Gotoh O. 1992. Substrate recognition sites in cytochrome P450 family 2 (CYP2) proteins inferred from comparative analyses of amino acid and coding nucleotide sequences. J. Biol. Chem. 267: 83-90.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 83-90
-
-
Gotoh, O.1
-
10
-
-
0025895757
-
Reactions and significance of cytochrome P-450 enzymes
-
Guengerich FP. 1991. Reactions and significance of cytochrome P-450 enzymes. J. Biol. Chem. 266: 10019-10022.
-
(1991)
J. Biol. Chem
, vol.266
, pp. 10019-10022
-
-
Guengerich, F.P.1
-
12
-
-
0037025384
-
The cytochrome P450 complement (CYPome) of Streptomyces coelicolor A3(2)
-
Lamb DC, Skaug T, Song HL, Jackson CJ, Podust LM, Waterman MR, et al. 2002. The cytochrome P450 complement (CYPome) of Streptomyces coelicolor A3(2). J. Biol. Chem. 277: 24000-24005.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 24000-24005
-
-
Lamb, D.C.1
Skaug, T.2
Song, H.L.3
Jackson, C.J.4
Podust, L.M.5
Waterman, M.R.6
-
13
-
-
0037441653
-
Structure validation by C α geometry: Phi, psi and C beta deviation
-
Lovell SC, Davis IQ, Arendall III WB, De Bakker PI, Word JM, Prisant MG, et al. 2003. Structure validation by C α geometry: phi, psi and C beta deviation. Proteins 50: 437-450.
-
(2003)
Proteins
, vol.50
, pp. 437-450
-
-
Lovell, S.C.1
Davis, I.Q.2
Arendall, I.3
De Bakker, P.I.4
Word, J.M.5
Prisant, M.G.6
-
16
-
-
78651165715
-
The carbon monoxide-binding pigment of liver microsomes: 1. Evidence for its hemoprotein nature
-
Omura T, Sato R. 1964. The carbon monoxide-binding pigment of liver microsomes: 1. Evidence for its hemoprotein nature. J. Biol. Chem. 239: 2370-2378.
-
(1964)
J. Biol. Chem
, vol.239
, pp. 2370-2378
-
-
Omura, T.1
Sato, R.2
-
19
-
-
14844346830
-
Cytochrome P450 structure, mechanism, and biochemistry
-
In Ortiz de Montellano PR, Voss De JJ (eds.), Kluwer Academic/PlenumPublishers, NY
-
Ortiz de Montellano PR. 2004. Cytochrome P450 structure, mechanism, and biochemistry, pp. 183-247. In Ortiz de Montellano PR, Voss De JJ (eds.). Substrate Oxidation by Cytochrome P450 Enzymes. Kluwer Academic/PlenumPublishers, NY.
-
(2004)
Substrate Oxidation by Cytochrome P450 Enzymes
, pp. 183-247
-
-
De Ortiz Montellano, P.R.1
-
20
-
-
0025257597
-
Putidaredoxin reductase and putidaredoxin: Cloning, sequence determination, and heterologous expression of the proteins
-
Peterson JA, Lorence MC, Amarneh B. 1990. Putidaredoxin reductase and putidaredoxin: cloning, sequence determination, and heterologous expression of the proteins. J. Biol. Chem. 265: 6066-6073.
-
(1990)
J. Biol. Chem
, vol.265
, pp. 6066-6073
-
-
Peterson, J.A.1
Lorence, M.C.2
Amarneh, B.3
-
21
-
-
0027326717
-
Crystal structure of hemoprotein domain of P450BM-3, a prototype for microsomal P450’s
-
Ravichandran KG, Boddupalli SS, Hasermann CA, Peterson JA, Deisenhofer J. 1993. Crystal structure of hemoprotein domain of P450BM-3, a prototype for microsomal P450’s. Science 261: 731-736.
-
(1993)
Science
, vol.261
, pp. 731-736
-
-
Ravichandran, K.G.1
Boddupalli, S.S.2
Hasermann, C.A.3
Peterson, J.A.4
Deisenhofer, J.5
-
22
-
-
33750992460
-
The cytochrome P450 gene family CYP157 does not contain EXXR in the K-helix reducing the absolute conserved P450 residues to a single cysteine
-
Rupasinghe S, Schuler MA, Kagawa N, Yuan H, Lei L, Zhao B, et al. 2006. The cytochrome P450 gene family CYP157 does not contain EXXR in the K-helix reducing the absolute conserved P450 residues to a single cysteine. FEBS Lett. 580: 6338-6342.
-
(2006)
FEBS Lett
, vol.580
, pp. 6338-6342
-
-
Rupasinghe, S.1
Schuler, M.A.2
Kagawa, N.3
Yuan, H.4
Lei, L.5
Zhao, B.6
-
23
-
-
0028871814
-
Evaluation of comparative protein modeling by MODELLER
-
Sali A, Pottertone L, Yuan F, Van Vlijmen H, Karplus M. 1995. Evaluation of comparative protein modeling by MODELLER. Prot. Struct. Funct. Genet. 23: 318-326.
-
(1995)
Prot. Struct. Funct. Genet
, vol.23
, pp. 318-326
-
-
Sali, A.1
Pottertone, L.2
Yuan, F.3
Van Vlijmen, H.4
Karplus, M.5
-
25
-
-
33748750539
-
The struc tural basis for substrate anchoring, active site selectivity, and product formation by P450 PikC from Streptomyces venezuelae
-
Sherman DH, Shengying L, Yermalitskaya LV, Kim Y, Smith JA, Waterman MR, Podust LM. 2006. The struc tural basis for substrate anchoring, active site selectivity, and product formation by P450 PikC from Streptomyces venezuelae. J. Biol. Chem. 281: 26289-26297.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 26289-26297
-
-
Sherman, D.H.1
Shengying, L.2
Yermalitskaya, L.V.3
Kim, Y.4
Smith, J.A.5
Waterman, M.R.6
Podust, L.M.7
-
26
-
-
0025755694
-
Probing the role of lysines and arginines in the catalytic function of cytochrome P450d by site-directed mutagenesis. Interaction with NADPH-cytochrome P450 reductase
-
Shimizu T, Tateishi T, Hatano M, Fujii-Kuriyama Y. 1991. Probing the role of lysines and arginines in the catalytic function of cytochrome P450d by site-directed mutagenesis. Interaction with NADPH-cytochrome P450 reductase. J. Biol. Chem. 266: 3372-3375.
-
(1991)
J. Biol. Chem
, vol.266
, pp. 3372-3375
-
-
Shimizu, T.1
Tateishi, T.2
Hatano, M.3
Fujii-Kuriyama, Y.4
-
27
-
-
44649165683
-
Cytoc hrome P450 (CYP105F2) from Streptomyces peucetius and its activity with oleandomycin
-
Shrestha P, Oh TJ, Liou K, Sohng J K. 2008. Cytoc hrome P450 (CYP105F2) from Streptomyces peucetius and its activity with oleandomycin. Appl. Microbiol. Biotechnol. 79: 555-562.
-
(2008)
Appl. Microbiol. Biotechnol
, vol.79
, pp. 555-562
-
-
Shrestha, P.1
Oh, T.J.2
Liou, K.3
Sohng, J.K.4
-
28
-
-
77649188866
-
Characterization of CYP166B1 and its electron transfer system in Streptomyces peucetius var. Caesius ATCC27952
-
Shrestha P, Oh TJ, Niraula NP, Liou K, Yoo JC, Sohng JK. 2010. Characterization of CYP166B1 and its electron transfer system in Streptomyces peucetius var. caesius ATCC27952. Enzyme Microb. Technol. 46: 372-377.
-
(2010)
Enzyme Microb. Technol
, vol.46
, pp. 372-377
-
-
Shrestha, P.1
Oh, T.J.2
Niraula, N.P.3
Liou, K.4
Yoo, J.C.5
Sohng, J.K.6
-
29
-
-
0027490731
-
Recognition of errors in three-dimensional structures of proteins
-
Sippl MJ. 1993. Recognition of errors in three-dimensional structures of proteins. Proteins 17: 355-362.
-
(1993)
Proteins
, vol.17
, pp. 355-362
-
-
Sippl, M.J.1
-
30
-
-
84941885018
-
-
The ExPASy (Expert ProteinAnalysis System)proteomics server of the
-
The ExPASy (Expert ProteinAnalysis System) proteomics server of the Swiss Institute of Bioinformatics (SIB). Available at http://ca.expasy.org.
-
-
-
Swiss Institute of Bioinformatics (SIB)1
-
31
-
-
31844447468
-
Oxidative activities of heterologously expressed CYP107B1 and CYP105D1 in whole-cell biotransformation using Streptomyces lividans TK24
-
Ueno M, Yamashita M, Hashimoto M, Hino M, Fujie A. 2005. Oxidative activities of heterologously expressed CYP107B1 and CYP105D1 in whole-cell biotransformation using Streptomyces lividans TK24. J. Biosci. Bioeng. 100: 567-572.
-
(2005)
J. Biosci. Bioeng
, vol.100
, pp. 567-572
-
-
Ueno, M.1
Yamashita, M.2
Hashimoto, M.3
Hino, M.4
Fujie, A.5
-
32
-
-
49249117096
-
Bioconversion of small molecules by cytochrome P450 species expressed in Escherichia coli
-
Uno T, Okamoto S, Masuda S, Itoh A, Uno Y, Nakamura M, et al. 2008. Bioconversion of small molecules by cytochrome P450 species expressed in Escherichia coli. Biotechnol. Appl. Biochem. 50: 165-171.
-
(2008)
Biotechnol. Appl. Biochem
, vol.50
, pp. 165-171
-
-
Uno, T.1
Okamoto, S.2
Masuda, S.3
Itoh, A.4
Uno, Y.5
Nakamura, M.6
-
33
-
-
0037212102
-
LigandFit: A novel method for the shape-directed rapid doc king of ligands to protein active sites
-
Venkatachalam CM, Jiang X, Oldeld T, Waldman M. 2003. LigandFit: a novel method for the shape-directed rapid doc king of ligands to protein active sites. J. Mol. Graph. Model. 21: 289-307.
-
(2003)
J. Mol. Graph. Model
, vol.21
, pp. 289-307
-
-
Venkatachalam, C.M.1
Jiang, X.2
Oldeld, T.3
Waldman, M.4
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