The chitinase C gene PsChiC from Pseudomonas sp. and its synergistic effects on larvicidal activity

Genetics and Molecular Biology

Volumn 38, Issue 3, 2015, Pages 366-372

  Zhong, Wanfang ^a,b   Ding, Shaojun ^b   Guo, Huifang ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b NANJING FORESTRY UNIVERSITY   (China)

Author keywords

Catalytic domain; Chitin binding domain; Fibronectin type like domain; Gene cloning; Insecticidal activity

Indexed keywords

BACTERIAL DNA; FIBRONECTIN; GLYCOSIDASE;

AMINO ACID SEQUENCE; ARTHROPOD LARVA; ARTICLE; BACTERIAL CHROMOSOME; BACTERIAL GENE; BACULOVIRIDAE; BIOINFORMATICS; CHEMICAL PEST CONTROL; CHITINASE C GENE; CONTROLLED STUDY; DNA SEQUENCE; ENZYME ACTIVE SITE; ENZYME ACTIVITY; ENZYME ASSAY; GENE ISOLATION; INSECTICIDAL ACTIVITY; LARVICIDAL ACTIVITY; MOLECULAR WEIGHT; NONHUMAN; OPEN READING FRAME; POLYACRYLAMIDE GEL ELECTROPHORESIS; POLYMERASE CHAIN REACTION; PSEUDOMONAS; SEQUENCE HOMOLOGY; SERRATIA MARCESCENS; SPECIES COMPARISON; SPODOPTERA LITURA; VIRUS VIRULENCE;

EID: 84941659391     PISSN: 14154757     EISSN: 16784685     Source Type: Journal    
DOI: 10.1590/S1415-475738320140320     Document Type: Article

References (40)

1. Andersen HR, Wohlfahrt-Veje C, Dalgård C, Christiansen L, Main KM, Nellemann C, Murata K, Jensen TK, Skakkebaek NE and Grandjean P (2012) Paraoxonase 1 polymorphism and prenatal pesticide exposure associated with adverse cardiovascular risk profiles at school age. PloS One 7:e36830.
2. Aronson Jr NN, Halloran BA, Alexeyev MF, Zhou XE, Wang Y, Meehan EJ and Chen L (2006) Mutation of a conserved tryptophan in the chitin-binding cleft of Serratia maracescens chitinase A enhances transglycosylation. Biosci Biotechnol Biochem 70:243-251.
3. Artimo P, Jonnalagedda M, Arnold K, Baratin D, Csardi G, de Castro E, Duvaud S, Flegel V, Fortier A, Gasteiger E, et al. (2012) ExPASy: SIB bioinformatics resource portal. Nucleic Acids Res 40:W597-W603.
4. Ashour MB, Ragheb DA, EI-Sheikh E-SA, Gomaa E-AA, Kamita SG and Hammock BD (2007) Biosafety of recombinant and wild type nucleopolyhedrovirus as bioinsecticides. Int J Environ Res Public Health 4:111-125.
5. Balbás P (2001) Understanding the art of producing protein and nonprotein molecules in E. coli. Mol Biotechnol 19:251-267.
6. Baldwin RA, Salmon TP, Schmidt RH and Timm RM (2013) Wildlife pests of California agriculture: regional variability and subsequent impacts on management. Crop Protection 46:29-37.
7. Barboza-Corona JE, Nieto-Mazzocco E, Velazquez-Robledo R, Salcedo-Hernandez R, Bautista M, Jimenez B and Ibarra JE (2003) Cloning, sequencing, and expression of the chitinase gene chiA74 from Bacillus thuringiensis. Appl Environ Microbiol 69:1023-1029.
8. Bennasar A, Mulet M, Lalucat J and Garcia-Valdes E (2010) PseudoMLSA: a database for multigenic sequence analysis of Pseudomonas species. BMC Microbiol 10:118.
9. Collinge DB, Kragh KM, Mikkelsen JD, Nielsen KK, Rasmussen U and Vad1 K (1993) Plant chitinases. Plant J 3:31-40.
10. Devine GJ and Furlong MJ (2007) Insecticide use: contexts and ecological consequences. Agr Hum Values 24:281-306.
11. Fan Y, Zhang Y, Yang X, Pei X, Guo S and Pei Y (2007) Expression of a Beauveria bassiana chitinase (Bbchit1) in Escherichia coli and Pichia pastoris. Protein Expr Purif 56:93-99.
12. Felse PA and Panda T (1999) Regulation and cloning of microbial chitinase genes. Appl Microbiol Biotechnol 51:141-151.
13. Flach J, Pilet PE and Jolles P (1992) What’s new in chitinase research? Experientia 48:701-716.
14. Gomez L, Allona I, Casado R and Aragoncillo C (2002) Seed chitinases. Seed Sci Res 12:217-230.
15. Henrissat B (1991) A classification of glycosyl hydrolases based on amino acid sequence similarities. J Biochem 280:309-316.
16. Henrissat B (1999) Classification of chitinases modules. EXS 87:137-156.
17. Henrissat B and Bairoch A (1993) New families in the classification of glycosyl hydrolases based on amino-acid sequence similarities. Biochem J 293:781-788.
18. Henrissat B and Bairoch A (1996) Updating the sequence-based classification of glycosyl hydrolases. Biochem J 316:695-696.
19. Huang Y and Zhang L (2004) Rapid and sensitive dot-matrix methods for genome analysis. Bioinformatics 20:460.
20. Inceoglu AB, Kamita SG and Hammock BD (2006) Genetically modified baculoviruses: A historical overview and future outlook. Adv Virus Res 68:323-360.
21. Letunic I, Doerks T and Bork P (2012) SMART 7: Recent updates to the protein domain annotation resource. Nucleic Acids Res 40:D302-D305.
22. Levorson J and Chlan CA (1997) Plant chitinase consensus sequences. Plant Mol Biol Rep 15:122-133.
23. Little E, Bork P and Doolittle RF (1994) Tracing the spread of fibronectin type III domains in bacterial glyco-hydrolases. J Mol Evol 39:631-643.
24. Lowry OH, Rosebrough NJ, Farr AL and Randall RJ (1951) Protein measurement with the Folin phenol reagent. J Biol Chem 193:265-275.
25. Mills NJ and Kean JM (2010) Behavioral studies, molecular approaches, and modelling: methodological contributions to biological control success. Biol Control 52:255-262.
26. Morimoto K, Karita S, Kimura T, Sakka K and Ohmiya K (1997) Cloning, sequencing, and expression of the gene encoding Clostridium paraputrificum chitinase ChiB and analysis of the functions of novel cadherin-like domains and a chitinbinding domain. J Bacteriol 179:7306-7314.
27. Moscardi F (1999) Assessment of the application of baculoviruses for control of Lepidoptera. Annu Rev Entomol 44:257-289.
28. Ohishi K, Murase K, Ohta T and Etoh H (2000) Cloning and sequencing of the deacetylase gene from Vibrio alginolyticus H-8. J Biosci Bioeng 90:561-563.
29. Pang Y, Yu J, Wang L, Hu X, Bao W, Li G, Chen C, Han H, Hu S and Yang H (2001) Sequence analysis of the Spodoptera litura multicapsid nucleopolyhedrovirus genome, Virology 287:391-404.
30. Rao R, Fiandra L, Giordana B, Eguileor de M, Congiu T, Burlini N, Arciello S, Corrado G and Pennacchio F (2004) AcMNPV ChiA protein disrupts the peritrophic membrane and alters midgut physiology of Bombyx mori larvae. Insect Biochem Mol Biol 34:1205-1213.
31. Roberts WK and Selitrennikoff CP (1988) Plant and bacterial chitinases differ in antifungal activity. J Gen Microbiol 134:169-176.
32. Sambrook J and Russell DW (2001) Molecular Cloning: A Laboratory Manual. 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
33. Sidhu SS, Kalmar G.B, Willis LG and Borgford TJ (1994) Streptomyces griseus protease C. A novel enzyme of the chymotrypsin superfamily. J Biol Chem 269:20167-20171.
34. Suzuki K, Taiyoji M, Sugawara N, Nikaidou N, Henrissat B and Watanabe T (1999) The third chitinase gene (chiC) of Serratia marcescens 2170 and the relationship of its product to other bacterial chitinases. Biochem J 343:587-596.
35. Wang Y, Choi JY, Roh JY, Tao XY, Liu Q, Lee JH, Kim JS, Kim WJ and Je YH (2013) Insecticidal activity of the chitinase from the Spodoptera litura nucleopolyhedrovirus. Entomol Res 43:63-69.
36. Watanabe T, Kobori K, Miyashita K, Fujii T, Sakai H, Uchida M and Tanaka H (1993) Identification of glutamic acid 204 and aspartic acid 200 in chitinase A1 of Bacillus circulans WL-12 as essential residues for chitinase activity. J Biol Chem 268:18567-18572.
37. Watanabe T, Suzuki K, Oyanagi W, Ohnishi K and Tanaka H (1990) Gene cloning of chitinase A1 from Bacillus circulans WL-12 revealed its evolutionary relationship to Serratia chitinase and to the type III homology units of fibronectin. J Biol Chem 265:15659-15665.
38. SMART 7 - protein domain annotation resource, http://smart.embl-heidelberg.de/ (accessed on May 5, 2014).
39. SBASE Domain Prediction System, http://hydra.icgeb.trieste.it/sbase/ (accessed on May 5, 2014).
40. ExPASy Bioinformatics Resources Portal, http://www.expasy.org/cgi-bin/pi_tool.html server (accessed on May 5, 2014).