The third chitinase gene (chiC) of Serratia marcescens 2170 and the relationship of its product to other bacterial chitinases

Biochemical Journal

Volumn 343, Issue 3, 1999, Pages 587-596

  Suzuki, Kazushi ^a   Taiyoji, Mayumi ^a   Sugawara, Noriko ^a   Nikaidou, Naoki ^a   Henrissat, Bernard ^b   Watanabe, Takeshi ^a  

^a NIIGATA UNIVERSITY   (Japan)

^b CNRS   (France)

Author keywords

Chitin binding domain; Fibronectin type III; Hydrophobic cluster analysis; Phylogenetic analysis

Indexed keywords

BACTERIAL ENZYME; CHITIN; CHITINASE; SIGNAL PEPTIDE;

ARTICLE; BACTERIAL GENE; CARBOXY TERMINAL SEQUENCE; ENZYME ACTIVITY; ENZYME STRUCTURE; GENE ISOLATION; HYDROLYSIS; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; PROTEIN DOMAIN; SERRATIA MARCESCENS;

AMINO ACID SEQUENCE; BACILLUS; BACTERIAL PROTEINS; BASE SEQUENCE; CHITINASE; EVOLUTION, MOLECULAR; ISOENZYMES; KINETICS; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROTEIN STRUCTURE, SECONDARY; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SERRATIA MARCESCENS; STREPTOMYCES GRISEUS; SUBSTRATE SPECIFICITY;

BACTERIA (MICROORGANISMS); PROKARYOTA; SERRATIA MARCESCENS;

EID: 0033229842     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/0264-6021:3430587     Document Type: Article

References (45)

1. Henrissat, B. (1991) Biochem. J. 280, 309-316
2. Ohno, T., Armand, S., Hata, T., Nikaidou, N., Henrissat, B., Mitsutomi, M. and Watanabe, T. (1996) J. Bacteriol. 178, 5065-5070
3. Perrakis, A., Tews, I., Dauter, Z., Oppenheim, A. B., Chet, I., Wilson, K. S. and Vorgias, C. E. (1994) Structure 2, 1169-1180
4. Terwisscha van Scheltinga, A. C., Kalk, K. H., Beintema, J. J. and Dijkstra, B. W. (1994) Structure 2, 1181-1189
5. Hart, P. J., Pfluger, H. D., Monzingo, A. F., Hollis, T. and Robertus, J. D. (1995) J. Mol. Biol. 248, 402-413
6. Blaak, H. and Schrempf, H. (1995) Eur. J. Biochem. 229, 132-139
7. Morimoto, K., Karita, S., Kimura, T., Sakka, K. and Ohmiya, K. (1997) J. Bacteriol. 179, 7306-7314
8. Svitil, A. L. and Kirchman, D. L. (1998) Microbiology 144, 1299-1308
9. Watanabe, T., Ito, Y., Yamada, T., Hashimoto, M., Sekine, S. and Tanaka, H. (1994) J. Bacteriol. 176, 4465-4472
10. Alam, M. M., Mizutani, T., Isono, M., Nikaidou, N. and Watanabe, T. (1996) J. Ferment. Bioeng. 82, 28-36
11. Miyashita, K., Fujii, T., Watanabe, A. and Ueno, H. (1997) J. Ferment. Bioeng. 83, 26-31
12. Shiro, M., Ueda, M., Kawaguchi, T. and Arai, M. (1996) Biochim. Biophys. Acta 1305, 44-48
13. Harpster, M. H. and Dunsmuir, P. (1989) Nucleic Acids Res. 17, 5395
14. Jones, J. D. G., Grady, K. L., Suslow, T. V. and Bedbrook, J. R. (1986) EMBO J. 5, 467-473
15. Brurberg, M. B., Eijsink, V. G., Haandrikman, A. J., Venema, G. and Nes, I. F. (1995) Microbiology 141, 123-131
16. Brurberg, M. B., Eijsink, V. G. and Nes, I. F. (1994) FEMS Microbiol. Lett. 124, 399-404
17. Gal, S. W., Choi, J. Y., Kim, C. Y., Cheong, Y. H., Choi, Y. J., Bahk, J. D., Lee, S. Y. and Cho, M. J. (1997) FEMS Microbiol. Lett. 151, 197-204
18. Watanabe, T., Kimura, K., Sumiya, T., Nikaidou, N., Suzuki, K., Suzuki, M., Taiyoji, M., Ferrer, S. and Regue, M. (1997) J. Bacteriol. 179, 7111-7117
19. Gal, S. W., Choi, J. Y., Kim, C. Y., Cheong, Y. H., Choi, Y. J., Lee, S. Y., Bahk, J. D. and Cho, M. J. (1998) FEMS Microbiol. Lett. 160, 151-158
20. Suzuki, K., Suzuki, M., Taiyoji, M., Nikaidou, N. and Watanabe, T. (1998) Biosci. Biotechnol. Biochem. 62, 128-135
21. Fuchs, R. L. McPherson, S. A. and Drahos, D. J. (1986) Appl. Environ. Microbiol. 51, 504-509
22. Palomar, J., Guasch, J. F., Regue, M. and Vinas, M. (1990) FEMS Microbiol. Lett. 57, 255-258
23. Monreal, J and Reese, E. T. (1969) Can. J. Microbiol. 15, 689-696
24. Watanabe, T., Oyanagi, W., Suzuki, K. and Tanaka, H. (1990) J. Bacteriol. 172, 4017-4022
25. Schagger, H. and von Jagow, G. (1987) Anal. Biochem. 166, 368-379
26. Silhavy, T. J., Berman, M. L. and Enquist, L. W. (1984) Experiments with Gene Fusions, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
27. Lipman, D. J. and Pearson, W. R. (1985) Science 227, 1435-1441
28. Imoto, T. and Yagishita, K. (1971) Agr. Biol. Chem. 35, 1154-1156
29. Lowry, O. H., Rosebrough, N. J., Farr, A. L. and Randall, R. J. (1951) J. Biol. Chem. 193, 265-275
30. Jeuniaux, C. (1966) Methods Enzymol. 8, 644-650
31. Yamada, H. and Imoto, T. (1981) Carbohydr. Res. 92, 160-162
32. Molano, J., Duran, A. and Cabib, E. (1977) Anal. Biochem. 83, 648-656
33. Boulware, D. W., Goldsworthy, P. D., Nardella, F. A. and Mannik, M. (1985) Mol. Immunol. 22, 1317-1322
34. Watanabe, T., Kobori, K., Miyashita, K., Fujii, T., Sakai, H., Uchida, M. and Tanaka, H. (1993) J. Biol. Chem. 268, 18567-18572
35. Tormo, J., Lamed, R., Chirino, A. J., Morag, E., Bayer, E. A., Shoham, Y. and Steitz, T. A. (1996) EMBO J. 15, 5739-5751
36. Watanabe, T., Suzuki, K., Oyanagi, W., Ohnishi, K. and Tanaka, H. (1990) J. Biol. Chem. 265, 15659-15665
37. Little, E., Bork, P. and Doolittle, R. F. (1994) J. Mol. Evol. 39, 631-643
38. Lètoffè, S., Ghigo, J. M. and Wandersman, C. (1993) J. Bacteriol. 175, 7321-7328
39. Akatsuka, H., Kawai, E., Omori, K., Komatsubara, S., Shibatani, T. and Tosa, T. (1994) J. Bacteriol. 176, 1949-1956
40. Binet, R., Létoffé, S., Ghigo, J. M., Delepelaire, P. and Wandersman, C. (1997) Gene 192, 7-11
41. Gaboriaud, C., Bissery, V., Benchetrit, T. and Mornon, J. P. (1987) FEBS Lett. 224, 149-155
42. Lemesle-Varloot, L., Henrissat, B., Gaboriaud, C., Bissery, V., Morgat, A. and Mornon, J. P. (1990) Biochimie 72, 555-574
43. Saitou, N. and Nei, M. (1987) Mol. Biol. Evol. 4, 406-425
44. Brurberg, M. B., Nes, I. F. and Eijsink, V. G. (1996) Microbiology 142, 1581-1589
45. Thompson, J. D., Higgins, D. G. and Gibson, T. J. (1994) Nucleic Acids Res. 22, 4673-4680