메뉴 건너뛰기




Volumn 6, Issue 4, 2015, Pages

Genomics and ecophysiology of heterotrophic nitrogen-fixing bacteria isolated from estuarine surface water

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIA; ETHYLENE; GLUCOSE; NITROGEN; NITROGENASE; OXYGEN; SURFACE WATER; BACTERIAL DNA; SEA WATER;

EID: 84940853212     PISSN: 21612129     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.00929-15     Document Type: Article
Times cited : (72)

References (68)
  • 1
    • 0024228570 scopus 로고
    • Nitrogen fixation in freshwater, estuarine, and marine ecosystems Rates and importance
    • Howarth RW, Marino R, Lane J, Cole JJ. 1988. Nitrogen fixation in freshwater, estuarine, and marine ecosystems Rates and importance. Limnol Oceanogr 33:669–687. http://dx.doi.org/10.4319/lo.1988.33.4_part_2.0669
    • (1988) Limnol Oceanogr , vol.33 , pp. 669-687
    • Howarth, R.W.1    Marino, R.2    Lane, J.3    Cole, J.J.4
  • 3
    • 0038234799 scopus 로고    scopus 로고
    • Nitrogenase gene diversity and microbial community structure: A cross-system comparison
    • Zehr JP, Jenkins BD, Short SM, Steward GF. 2003. Nitrogenase gene diversity and microbial community structure: a cross-system comparison. Environ Microbiol 5:539–554. http://dx.doi.org/10.1046/j.1462-2920.2003.00451.x
    • (2003) Environ Microbiol , vol.5 , pp. 539-554
    • Zehr, J.P.1    Jenkins, B.D.2    Short, S.M.3    Steward, G.F.4
  • 4
    • 0024746373 scopus 로고
    • Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium thiebautii
    • Zehr JP, McReynolds LA. 1989. Use of degenerate oligonucleotides for amplification of the nifH gene from the marine cyanobacterium Trichodesmium thiebautii. Appl Environ Microbiol 55:2522–2526
    • (1989) Appl Environ Microbiol , vol.55 , pp. 2522-2526
    • Zehr, J.P.1    McReynolds, L.A.2
  • 5
    • 35448986565 scopus 로고    scopus 로고
    • Nitrogen fixation: Nitrogenase genes and gene expression
    • Zehr JP, Turner PJ. 2001. Nitrogen fixation: nitrogenase genes and gene expression. Methods Microbiol 30:271–286
    • (2001) Methods Microbiol , vol.30 , pp. 271-286
    • Zehr, J.P.1    Turner, P.J.2
  • 6
    • 78649827665 scopus 로고    scopus 로고
    • Nitrogenase genes in noncyanobacterial plankton: Prevalence, diversity and regulation in marine waters
    • Riemann L, Farnelid H, Steward G. 2010. Nitrogenase genes in noncyanobacterial plankton: prevalence, diversity and regulation in marine waters. Aquat Microb Ecol 61:235–247. http://dx.doi.org/10.3354/ame01431
    • (2010) Aquat Microb Ecol , vol.61 , pp. 235-247
    • Riemann, L.1    Farnelid, H.2    Steward, G.3
  • 8
    • 84880919938 scopus 로고    scopus 로고
    • Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea
    • Farnelid H, Bentzon-Tilia M, Andersson AF, Bertilsson S, Jost G, Labrenz M, Jürgens K, Riemann L. 2013. Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea. ISME J 7:1413–1423. http://dx.doi.org/10.1038/ismej.2013.26
    • (2013) ISME J , vol.7 , pp. 1413-1423
    • Farnelid, H.1    Bentzon-Tilia, M.2    Ersson, A.F.3    Bertilsson, S.4    Jost, G.5    Labrenz, M.6    Jürgens, K.7    Riemann, L.8
  • 9
    • 79958175735 scopus 로고    scopus 로고
    • Nitrogen fixation in denitrified marine waters
    • Fernandez C, Farías L, Ulloa O. 2011. Nitrogen fixation in denitrified marine waters. PLoS One 6:e20539. http://dx.doi.org/10.1371/journal.pone.0020539
    • (2011) Plos One , vol.6
    • Fernandez, C.1    Farías, L.2    Ulloa, O.3
  • 11
    • 78650948077 scopus 로고    scopus 로고
    • Identification of diazotrophic microorganisms in marine sediment via fluorescence in situ hybridization coupled to nanoscale secondary ion mass spectrometry (FISH-NanoSIMS)
    • Dekas AE, Orphan VJ. 2011. Identification of diazotrophic microorganisms in marine sediment via fluorescence in situ hybridization coupled to nanoscale secondary ion mass spectrometry (FISH-NanoSIMS). Methods Enzymol 486:281–305. http://dx.doi.org/10.1016/B978-0-12-381294-0.00012-2
    • (2011) Methods Enzymol , vol.486 , pp. 281-305
    • Dekas, A.E.1    Orphan, V.J.2
  • 12
    • 84881528478 scopus 로고    scopus 로고
    • Evidence of active dinitrogen fixation in surface waters of the eastern tropical South Pacific during El Niño and La Niña events and evaluation of its potential nutrient controls
    • Dekaezemacker J, Bonnet S, Grosso O, Moutin T, Bressac M, Capone DG. 2013. Evidence of active dinitrogen fixation in surface waters of the eastern tropical South Pacific during El Niño and La Niña events and evaluation of its potential nutrient controls. Global Biogeochem Cycles 27:768–779. http://dx.doi.org/10.1002/gbc.20063
    • (2013) Global Biogeochem Cycles , vol.27 , pp. 768-779
    • Dekaezemacker, J.1    Bonnet, S.2    Grosso, O.3    Moutin, T.4    Bressac, M.5    Capone, D.G.6
  • 13
    • 84907878543 scopus 로고    scopus 로고
    • The paradox of marine heterotrophic nitrogen fixation: Abundances of heterotrophic diazotrophs do not account for nitrogen fixation rates in the eastern tropical South Pacific
    • Turk-Kubo KA, Karamchandani M, Capone DG, Zehr JP. 2014. The paradox of marine heterotrophic nitrogen fixation: abundances of heterotrophic diazotrophs do not account for nitrogen fixation rates in the eastern tropical South Pacific. Environ Microbiol 16:3095–3114. http://dx.doi.org/10.1111/1462-2920.12346
    • (2014) Environ Microbiol , vol.16 , pp. 3095-3114
    • Turk-Kubo, K.A.1    Karamchandani, M.2    Capone, D.G.3    Zehr, J.P.4
  • 14
    • 51249189983 scopus 로고
    • Distribution of nitrogen-fixing bacteria in the central Pacific Ocean
    • Maruyama Y, Taga N, Matsuda O. 1970. Distribution of nitrogen-fixing bacteria in the central Pacific Ocean. J Oceanograph Soc Japan 26: 360–366. http://dx.doi.org/10.1007/BF02753907
    • (1970) J Oceanograph Soc Japan , vol.26 , pp. 360-366
    • Maruyama, Y.1    Taga, N.2    Matsuda, O.3
  • 15
    • 0024821299 scopus 로고
    • Enumeration and characterization of nitrogen-fixing bacteria in an eelgrass (Zostera marina) bed
    • Shieh WY, Simidu U, Maruyama Y. 1989. Enumeration and characterization of nitrogen-fixing bacteria in an eelgrass (Zostera marina) bed. Microb Ecol 18:249–259
    • (1989) Microb Ecol , vol.18 , pp. 249-259
    • Shieh, W.Y.1    Simidu, U.2    Maruyama, Y.3
  • 16
    • 0032851747 scopus 로고    scopus 로고
    • Isolation of nitrogen-fixing bacteria containing molybdenum-independent nitrogenases from natural environments
    • Loveless TM, Saah JR, Bishop PE. 1999. Isolation of nitrogen-fixing bacteria containing molybdenum-independent nitrogenases from natural environments. Appl Environ Microbiol 65:4223–4226
    • (1999) Appl Environ Microbiol , vol.65 , pp. 4223-4226
    • Loveless, T.M.1    Saah, J.R.2    Bishop, P.E.3
  • 17
    • 44949091610 scopus 로고    scopus 로고
    • Characterization of diazotrophs containing Mo-independent nitrogenases, isolated from diverse natural environments
    • Betancourt DA, Loveless TM, Brown JW, Bishop PE. 2008. Characterization of diazotrophs containing Mo-independent nitrogenases, isolated from diverse natural environments. Appl Environ Microbiol 74: 3471–3480. http://dx.doi.org/10.1128/AEM.02694-07
    • (2008) Appl Environ Microbiol , vol.74 , pp. 3471-3480
    • Betancourt, D.A.1    Loveless, T.M.2    Brown, J.W.3    Bishop, P.E.4
  • 18
    • 33846104990 scopus 로고    scopus 로고
    • Isolation and gene quantification of heterotrophic N2-fixing bacterioplankton in the Baltic Sea
    • Boström KH, Riemann L, Kühl M, Hagström Å. 2007. Isolation and gene quantification of heterotrophic N2-fixing bacterioplankton in the Baltic Sea. Environ Microbiol 9:152–164. http://dx.doi.org/10.1111/j.1462-2920.2006.01124.x
    • (2007) Environ Microbiol , vol.9 , pp. 152-164
    • Boström, K.H.1    Riemann, L.2    Kühl, M.3    Hagström, Å.4
  • 19
    • 84899939497 scopus 로고    scopus 로고
    • Cultivation and isolation of N2-fixing bacteria from suboxic waters in the Baltic Sea
    • Bentzon-Tilia M, Farnelid H, Jürgens K, Riemann L. 2014. Cultivation and isolation of N2-fixing bacteria from suboxic waters in the Baltic Sea. FEMS Microbiol Ecol 88:358–371. http://dx.doi.org/10.1111/1574-6941.12304
    • (2014) FEMS Microbiol Ecol , vol.88 , pp. 358-371
    • Bentzon-Tilia, M.1    Farnelid, H.2    Jürgens, K.3    Riemann, L.4
  • 20
    • 84907877905 scopus 로고    scopus 로고
    • Isolation of heterotrophic diazotrophic bacteria from estuarine surface waters
    • Farnelid H, Harder J, Bentzon-Tilia M, Riemann L. 2014. Isolation of heterotrophic diazotrophic bacteria from estuarine surface waters. Environ Microbiol 16:3072–3082. http://dx.doi.org/10.1111/1462-2920.12335
    • (2014) Environ Microbiol , vol.16 , pp. 3072-3082
    • Farnelid, H.1    Harder, J.2    Bentzon-Tilia, M.3    Riemann, L.4
  • 21
    • 4344704870 scopus 로고    scopus 로고
    • Genetic regulation of biological nitrogen fixation
    • Dixon R, Kahn D. 2004. Genetic regulation of biological nitrogen fixation. Nat Rev Microbiol 2:621–631. http://dx.doi.org/10.1038/nrmicro954
    • (2004) Nat Rev Microbiol , vol.2 , pp. 621-631
    • Dixon, R.1    Kahn, D.2
  • 22
    • 34547653982 scopus 로고    scopus 로고
    • Molecular ecology of nifH genes and transcripts in the eastern Mediterranean Sea
    • Man-Aharonovich D, Kress N, Zeev EB, Berman-Frank I, Béjà O. 2007. Molecular ecology of nifH genes and transcripts in the eastern Mediterranean Sea. Environ Microbiol 9:2354–2363. http://dx.doi.org/10.1111/j.1462-2920.2007.01353.x
    • (2007) Environ Microbiol , vol.9 , pp. 2354-2363
    • Man-Aharonovich, D.1    Kress, N.2    Zeev, E.B.3    Berman-Frank, I.4    Béjà, O.5
  • 23
    • 17444431237 scopus 로고    scopus 로고
    • Spatial distribution and transcriptional activity of an uncultured clade of planktonic diazotrophic _-proteobacteria in the Arabian Sea
    • Bird C, Martinez M, O’Donnell AG, Wyman M. 2005. Spatial distribution and transcriptional activity of an uncultured clade of planktonic diazotrophic _-proteobacteria in the Arabian Sea. Appl Environ Microbiol 71:2079–2085. http://dx.doi.org/10.1128/AEM.71.4.2079-2085.2005
    • (2005) Appl Environ Microbiol , vol.71 , pp. 2079-2085
    • Bird, C.1    Martinez, M.2    O’Donnell, A.G.3    Wyman, M.4
  • 24
    • 84921613766 scopus 로고    scopus 로고
    • Significant N2 fixation by heterotrophs, photoheterotrophs and heterocystous cyanobacteria in two temperate estuaries
    • Bentzon-Tilia M, Traving SJ, Mantikci M, Knudsen-Leerbeck H, Hansen JL, Markager S, Riemann L. 2015. Significant N2 fixation by heterotrophs, photoheterotrophs and heterocystous cyanobacteria in two temperate estuaries. ISME J 9:273–285. http://dx.doi.org/10.1038/ismej.2014.119
    • (2015) ISME J , vol.9 , pp. 273-285
    • Bentzon-Tilia, M.1    Traving, S.J.2    Mantikci, M.3    Knudsen-Leerbeck, H.4    Hansen, J.L.5    Markager, S.6    Riemann, L.7
  • 25
    • 80051698428 scopus 로고    scopus 로고
    • Intriguing diversity among diazotrophic picoplankton along a Mediterranean transect: A dominance of rhizobia
    • Le Moal M, Collin H, Biegala IC. 2011. Intriguing diversity among diazotrophic picoplankton along a Mediterranean transect: a dominance of rhizobia. Biogeosciences 8:827–840. http://dx.doi.org/10.5194/bg-8-827-2011
    • (2011) Biogeosciences , vol.8 , pp. 827-840
    • Le Moal, M.1    Collin, H.2    Biegala, I.C.3
  • 26
    • 51449118187 scopus 로고    scopus 로고
    • Diversity and abundance of diazotrophic microorganisms in the South China Sea during intermonsoon
    • Moisander PH, Beinart RA, Voss M, Zehr JP. 2008. Diversity and abundance of diazotrophic microorganisms in the South China Sea during intermonsoon. ISME J 2:954–967. http://dx.doi.org/10.1038/ismej.2008.51
    • (2008) ISME J , vol.2 , pp. 954-967
    • Moisander, P.H.1    Beinart, R.A.2    Voss, M.3    Zehr, J.P.4
  • 27
    • 0025822640 scopus 로고
    • Amplification, cloning, and sequencing of a nifH segment from aquatic microorganisms and natural communities
    • Kirshtein JD, Paerl HW, Zehr J. 1991. Amplification, cloning, and sequencing of a nifH segment from aquatic microorganisms and natural communities. Appl Environ Microbiol 57:2645–2650
    • (1991) Appl Environ Microbiol , vol.57 , pp. 2645-2650
    • Kirshtein, J.D.1    Paerl, H.W.2    Zehr, J.3
  • 30
    • 0025967373 scopus 로고
    • Genotypic and phenotypic diversity of Pseudomonas stutzeri
    • Rosselló R, Garcia-Valdes E, Lalucat J, Ursing J. 1991. Genotypic and phenotypic diversity of Pseudomonas stutzeri. Syst Appl Microbiol 14: 150–157. http://dx.doi.org/10.1016/S0723-2020(11)80294-8
    • (1991) Syst Appl Microbiol , vol.14 , pp. 150-157
    • Rosselló, R.1    Garcia-Valdes, E.2    Lalucat, J.3    Ursing, J.4
  • 31
    • 0027933958 scopus 로고
    • Nitrogen-fixation by Rhodopseudomonas palustris Ou 11 with aromatic compounds as carbon source/ electron donors
    • Sasikala C, Ramana CV, Rao P. 1994. Nitrogen-fixation by Rhodopseudomonas palustris Ou 11 with aromatic compounds as carbon source/ electron donors. FEMS Microbiol Lett 122:75–78. http://dx.doi.org/10.1111/j.1574-6968.1994.tb07146.x
    • (1994) FEMS Microbiol Lett , vol.122 , pp. 75-78
    • Sasikala, C.1    Ramana, C.V.2    Rao, P.3
  • 32
    • 84997751525 scopus 로고    scopus 로고
    • Complete genome sequence of Raoultella ornithinolytica strain B6, a 2,3-butanediol-producing bacterium isolated from oilcontaminated soil
    • Shin SH, Um Y, Beak JH, Kim S, Lee S, Oh MK, Kim YR, Lee J, Yang KS. 2013. Complete genome sequence of Raoultella ornithinolytica strain B6, a 2,3-butanediol-producing bacterium isolated from oilcontaminated soil. Genome Announc 1(3):e00395-13. http://dx.doi.org/10.1128/genomeA.00395-13
    • (2013) Genome Announc , vol.1 , Issue.3 , pp. e00395-e00413
    • Shin, S.H.1    Um, Y.2    Beak, J.H.3    Kim, S.4    Lee, S.5    Oh, M.K.6    Kim, Y.R.7    Lee, J.8    Yang, K.S.9
  • 33
    • 34249934013 scopus 로고    scopus 로고
    • Benzoic acid-degrading bacteria from the intestinal tract of Macrotermes michaelseni Sjostedt
    • Ngugi D, Tsanuo M, Boga H. 2007. Benzoic acid-degrading bacteria from the intestinal tract of Macrotermes michaelseni Sjostedt. J Basic Microbiol 47:87–92. http://dx.doi.org/10.1002/jobm.200610142
    • (2007) J Basic Microbiol , vol.47 , pp. 87-92
    • Ngugi, D.1    Tsanuo, M.2    Boga, H.3
  • 34
    • 84879884520 scopus 로고    scopus 로고
    • Dominant petroleum hydrocarbon-degrading bacteria in the Archipelago Sea in South-West Finland (Baltic Sea) belong to different taxonomic groups than hydrocarbon degraders in the oceans
    • Reunamo A, Riemann L, Leskinen P, Jørgensen KS. 2013. Dominant petroleum hydrocarbon-degrading bacteria in the Archipelago Sea in South-West Finland (Baltic Sea) belong to different taxonomic groups than hydrocarbon degraders in the oceans. Mar Pollut Bull 72:174–180. http://dx.doi.org/10.1016/j.marpolbul.2013.04.006
    • (2013) Mar Pollut Bull , vol.72 , pp. 174-180
    • Reunamo, A.1    Riemann, L.2    Leskinen, P.3    Jørgensen, K.S.4
  • 35
    • 77955759522 scopus 로고    scopus 로고
    • Aged black carbon identified in marine dissolved organic carbon
    • Ziolkowski LA, Druffel ERM. 2010. Aged black carbon identified in marine dissolved organic carbon. Geophys Res Lett 37:L16601. http://dx.doi.org/10.1029/2010GL043963
    • (2010) Geophys Res Lett , vol.37
    • Ziolkowski, L.A.1    Druffel, E.R.M.2
  • 36
    • 37049071087 scopus 로고
    • Metals in the nitrogenases
    • Eady RR, Leigh GJ. 1994. Metals in the nitrogenases. Dalton Trans 1994: 2739–2747. http://dx.doi.org/10.1039/DT9940002739
    • (1994) Dalton Trans , vol.1994 , pp. 2739-2747
    • Eady, R.R.1    Leigh, G.J.2
  • 37
    • 0030047955 scopus 로고    scopus 로고
    • Cloning, functional organization, transcript studies, and phylogenetic analysis of the complete nitrogenase structural genes (nifHDK2) and associated genes in the archaeon Methanosarcina barkeri 227
    • Chien YT, Zinder SH. 1996. Cloning, functional organization, transcript studies, and phylogenetic analysis of the complete nitrogenase structural genes (nifHDK2) and associated genes in the archaeon Methanosarcina barkeri 227. J Bacteriol 178:143–148
    • (1996) J Bacteriol , vol.178 , pp. 143-148
    • Chien, Y.T.1    Zinder, S.H.2
  • 39
    • 4344560389 scopus 로고    scopus 로고
    • The nitrogen-fixing gene (nifH) of Rhodopseudomonas palustris: A case of lateral gene transfer?
    • Cantera JJ, Kawasaki H, Seki T. 2004. The nitrogen-fixing gene (nifH) of Rhodopseudomonas palustris: a case of lateral gene transfer? Microbiology 150:2237–2246. http://dx.doi.org/10.1099/mic.0.26940-0
    • (2004) Microbiology , vol.150 , pp. 2237-2246
    • Cantera, J.J.1    Kawasaki, H.2    Seki, T.3
  • 40
    • 0023701258 scopus 로고
    • Nucleotide sequence of a 24206 base pair DNA fragment carrying the entire nitrogen fixation gene cluster of Klebsiella pneumoniae
    • Arnold W, Rump A, Klipp W, Priefer UB, Pühler A. 1988. Nucleotide sequence of a 24206 base pair DNA fragment carrying the entire nitrogen fixation gene cluster of Klebsiella pneumoniae. J Mol Biol 203:715–738. http://dx.doi.org/10.1016/0022-2836(88)90205-7
    • (1988) J Mol Biol , vol.203 , pp. 715-738
    • Arnold, W.1    Rump, A.2    Klipp, W.3    Priefer, U.B.4    Pühler, A.5
  • 41
    • 2442449227 scopus 로고    scopus 로고
    • Genomic islands in pathogenic and environmental microorganisms
    • Dobrindt U, Hochhut B, Hentschel U, Hacker J. 2004. Genomic islands in pathogenic and environmental microorganisms. Nat Rev Microbiol 2:414–424. http://dx.doi.org/10.1038/nrmicro884
    • (2004) Nat Rev Microbiol , vol.2 , pp. 414-424
    • Dobrindt, U.1    Hochhut, B.2    Hentschel, U.3    Hacker, J.4
  • 42
    • 73449136317 scopus 로고    scopus 로고
    • Horizontal transfer of the nitrogen fixation gene cluster in the cyanobacterium Microcoleus chthonoplastes
    • Bolhuis H, Severin I, Confurius-Guns V, Wollenzien UI, Stal LJ. 2010. Horizontal transfer of the nitrogen fixation gene cluster in the cyanobacterium Microcoleus chthonoplastes. ISME J 4:121–130. http://dx.doi.org/10.1038/ismej.2009.99
    • (2010) ISME J , vol.4 , pp. 121-130
    • Bolhuis, H.1    Severin, I.2    Confurius-Guns, V.3    Wollenzien, U.I.4    Stal, L.J.5
  • 43
    • 0002645734 scopus 로고
    • Bacterioplankton growth in seawater Growth of kinetics and cellular characteristics in seawater cultures
    • Ammerman JW, Fuhrman JA, Hagström Å, Azam F. 1984. Bacterioplankton growth in seawater Growth of kinetics and cellular characteristics in seawater cultures. Ecol Prog Ser 18:31–39
    • (1984) Ecol Prog Ser , vol.18 , pp. 31-39
    • Ammerman, J.W.1    Fuhrman, J.A.2    Hagström, Å.3    Azam, F.4
  • 44
    • 0023130018 scopus 로고
    • Nitrogen-fixation in Pseudomonas stutzeri
    • Krotzky A, Werner D. 1987. Nitrogen-fixation in Pseudomonas stutzeri. Arch Microbiol 147:48–57. http://dx.doi.org/10.1007/BF00492904
    • (1987) Arch Microbiol , vol.147 , pp. 48-57
    • Krotzky, A.1    Werner, D.2
  • 45
    • 0034059469 scopus 로고    scopus 로고
    • The “oxygen paradox” of dinitrogen- fixing bacteria
    • Marchal K, Vanderleyden J. 2000. The “oxygen paradox” of dinitrogen- fixing bacteria. Biol Fertil Soils 30:363–373. http://dx.doi.org/10.1007/s003740050017
    • (2000) Biol Fertil Soils , vol.30 , pp. 363-373
    • Marchal, K.1    Vanderleyden, J.2
  • 46
    • 0030663234 scopus 로고    scopus 로고
    • Respiratory protection of nitrogenase activity in Azotobacter vinelandii—roles of the terminal oxidases
    • Poole RK, Hill S. 1997. Respiratory protection of nitrogenase activity in Azotobacter vinelandii—roles of the terminal oxidases. Biosci Rep 17: 303–317. http://dx.doi.org/10.1023/A:1027336712748
    • (1997) Biosci Rep , vol.17 , pp. 303-317
    • Poole, R.K.1    Hill, S.2
  • 47
    • 78650378429 scopus 로고    scopus 로고
    • Production of hydrogen gas from light and the inorganic electron donor thiosulfate by Rhodopseudomonas palustris
    • Huang JJ, Heiniger EK, McKinlay JB, Harwood CS. 2010. Production of hydrogen gas from light and the inorganic electron donor thiosulfate by Rhodopseudomonas palustris. Appl Environ Microbiol 76:7717–7722. http://dx.doi.org/10.1128/AEM.01143-10
    • (2010) Appl Environ Microbiol , vol.76 , pp. 7717-7722
    • Huang, J.J.1    Heiniger, E.K.2    McKinlay, J.B.3    Harwood, C.S.4
  • 48
    • 0018137656 scopus 로고
    • Effect of light on nitrogenase function and synthesis in Rhodopseudomonas capsulata
    • Meyer J, Kelley BC, Vignais PM. 1978. Effect of light on nitrogenase function and synthesis in Rhodopseudomonas capsulata. J Bacteriol 136: 201–208
    • (1978) J Bacteriol , vol.136 , pp. 201-208
    • Meyer, J.1    Kelley, B.C.2    Vignais, P.M.3
  • 49
    • 77955388615 scopus 로고    scopus 로고
    • Carbon dioxide fixation as a central redox cofactor recycling mechanism in bacteria
    • McKinlay JB, Harwood CS. 2010. Carbon dioxide fixation as a central redox cofactor recycling mechanism in bacteria. Proc Natl Acad Sci U S A 107:11669–11675. http://dx.doi.org/10.1073/pnas.1006175107
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 11669-11675
    • McKinlay, J.B.1    Harwood, C.S.2
  • 50
    • 84874587050 scopus 로고    scopus 로고
    • The sensitivity of marine N2 fixation to dissolved inorganic nitrogen
    • Knapp AN. 2012. The sensitivity of marine N2 fixation to dissolved inorganic nitrogen. Front Microbiol 3:374. http://dx.doi.org/10.3389/fmicb.2012.00374
    • (2012) Front Microbiol , vol.3
    • Knapp, A.N.1
  • 51
    • 0021821712 scopus 로고
    • Covalent modification of the iron protein of nitrogenase from Rhodospirillum rubrum by adenosine diphosphorylation of a specific arginyl residue
    • Pope MR, Murrell SA, Ludden PW. 1985. Covalent modification of the iron protein of nitrogenase from Rhodospirillum rubrum by adenosine diphosphorylation of a specific arginyl residue. Proc Natl Acad Sci U S A 82:3173–3177. http://dx.doi.org/10.1073/pnas.82.10.3173
    • (1985) Proc Natl Acad Sci U S A , vol.82 , pp. 3173-3177
    • Pope, M.R.1    Murrell, S.A.2    Ludden, P.W.3
  • 52
    • 0022596239 scopus 로고
    • Reversible regulation of the nitrogenase iron protein from Rhodospirillum rubrum by ADPribosylation in vitro
    • Lowery RG, Saari LL, Ludden PW. 1986. Reversible regulation of the nitrogenase iron protein from Rhodospirillum rubrum by ADPribosylation in vitro. J Bacteriol 166:513–518
    • (1986) J Bacteriol , vol.166 , pp. 513-518
    • Lowery, R.G.1    Saari, L.L.2    Ludden, P.W.3
  • 53
    • 0023019608 scopus 로고
    • Studies on the activating enzyme for iron protein of nitrogenase from Rhodospirillum rubrum
    • Saari LL, Pope MR, Murrell SA, Ludden PW. 1986. Studies on the activating enzyme for iron protein of nitrogenase from Rhodospirillum rubrum. J Biol Chem 261:4973–4977
    • (1986) J Biol Chem , vol.261 , pp. 4973-4977
    • Saari, L.L.1    Pope, M.R.2    Murrell, S.A.3    Ludden, P.W.4
  • 54
    • 0001818566 scopus 로고
    • Determination of nitrogenase activity in aquatic samples using the acetylene reduction procedure
    • In Kemp PF, Sherr BF, Sherr EB, Cole JJ, CRC Press, Boca Raton, FL
    • Capone DG. 1993. Determination of nitrogenase activity in aquatic samples using the acetylene reduction procedure, p 621–629. In Kemp PF, Sherr BF, Sherr EB, Cole JJ (ed), Handbook of methods in aquatic microbial ecology. CRC Press, Boca Raton, FL
    • (1993) Handbook of Methods in Aquatic Microbial Ecology , pp. 621-629
    • Capone, D.G.1
  • 55
    • 0000414321 scopus 로고    scopus 로고
    • Anoxic aggregates— an ephemeral phenomenon in the pelagic environment?
    • Ploug H, Kühl M, Buchholz-Cleven B, Jørgensen B. 1997. Anoxic aggregates— an ephemeral phenomenon in the pelagic environment? Aquat Microb Ecol 13:285–294. http://dx.doi.org/10.3354/ame013285
    • (1997) Aquat Microb Ecol , vol.13 , pp. 285-294
    • Ploug, H.1    Kühl, M.2    Buchholz-Cleven, B.3    Jørgensen, B.4
  • 56
    • 0021799828 scopus 로고
    • Enumeration, isolation, and characterization of N2-fixing bacteria from seawater
    • Guerinot ML, Colwell RR. 1985. Enumeration, isolation, and characterization of N2-fixing bacteria from seawater. Appl Environ Microbiol 50: 350–355
    • (1985) Appl Environ Microbiol , vol.50 , pp. 350-355
    • Guerinot, M.L.1    Colwell, R.R.2
  • 57
    • 0000563302 scopus 로고    scopus 로고
    • Nitrogen-fixing, photosynthetic, anaerobic bacteria associated with pelagic copepods
    • Proctor L. 1997. Nitrogen-fixing, photosynthetic, anaerobic bacteria associated with pelagic copepods. Aquat Microb Ecol 12:105–113. http://dx.doi.org/10.3354/ame012105
    • (1997) Aquat Microb Ecol , vol.12 , pp. 105-113
    • Proctor, L.1
  • 58
    • 79956293298 scopus 로고    scopus 로고
    • Nitrogen fixation within the water column associated with two hypoxic basins in the Southern California Bight
    • Hamersley M, Turk K, Leinweber A, Gruber N, Zehr J, Gunderson T, Capone D. 2011. Nitrogen fixation within the water column associated with two hypoxic basins in the Southern California Bight. Aquat Microb Ecol 63:193–205. http://dx.doi.org/10.3354/ame01494
    • (2011) Aquat Microb Ecol , vol.63 , pp. 193-205
    • Hamersley, M.1    Turk, K.2    Leinweber, A.3    Gruber, N.4    Zehr, J.5    Gunderson, T.6    Capone, D.7
  • 59
    • 84885101383 scopus 로고    scopus 로고
    • Longitudinal variability of sizefractionated N2 fixation and DON release rates along 24.5°N in the subtropical North Atlantic
    • Benavides M, Bronk DA, Agawin NSR, Pérez-Hernández MD, Hernández-Guerra A, Arístegui J. 2013. Longitudinal variability of sizefractionated N2 fixation and DON release rates along 24.5°N in the subtropical North Atlantic. J Geophys Res Oceans 118:3406–3415. http://dx.doi.org/10.1002/jgrc.20253
    • (2013) J Geophys Res Oceans , vol.118 , pp. 3406-3415
    • Benavides, M.1    Bronk, D.A.2    Agawin, N.3    Pérez-Hernández, M.D.4    Hernández-Guerra, A.5    Arístegui, J.6
  • 60
    • 33645862986 scopus 로고
    • Domain of the marine microbiologist
    • In Oppenheimer CH, Charles C. Thomas, Springfield, IL
    • ZoBell CE. 1963. Domain of the marine microbiologist, p 3–24. In Oppenheimer CH (ed), Symposium on marine microbiology. Charles C. Thomas, Springfield, IL
    • (1963) Symposium on Marine Microbiology , pp. 3-24
    • Zobell, C.E.1
  • 61
    • 84896701453 scopus 로고    scopus 로고
    • Novel insight into the genetic context of the cadAB genes from a 4-chloro-2-methylphenoxyacetic acid-degrading Sphingomonas
    • Nielsen TK, Xu Z, Gözdereliler E, Aamand J, Hansen LH, Sørensen SR. 2013. Novel insight into the genetic context of the cadAB genes from a 4-chloro-2-methylphenoxyacetic acid-degrading Sphingomonas. PLoS One 8:e83346. http://dx.doi.org/10.1371/journal.pone.0083346
    • (2013) Plos One , vol.8
    • Nielsen, T.K.1    Xu, Z.2    Gözdereliler, E.3    Aamand, J.4    Hansen, L.H.5    Sørensen, S.R.6
  • 64
    • 84857188863 scopus 로고    scopus 로고
    • Artemis: An integrated platform for visualization and analysis of highthroughput sequence-based experimental data
    • Carver T, Harris SR, Berriman M, Parkhill J, McQuillan JA. 2012. Artemis: an integrated platform for visualization and analysis of highthroughput sequence-based experimental data. Bioinformatics 28: 464–469. http://dx.doi.org/10.1093/bioinformatics/btr703
    • (2012) Bioinformatics , vol.28 , pp. 464-469
    • Carver, T.1    Harris, S.R.2    Berriman, M.3    Parkhill, J.4    McQuillan, J.A.5
  • 65
    • 80052964484 scopus 로고    scopus 로고
    • Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea
    • Herlemann DP, Labrenz M, Jürgens K, Bertilsson S, Waniek JJ, Andersson AF. 2011. Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea. ISME J 5:1571–1579. http://dx.doi.org/10.1038/ismej.2011.41
    • (2011) ISME J , vol.5 , pp. 1571-1579
    • Herlemann, D.P.1    Labrenz, M.2    Jürgens, K.3    Bertilsson, S.4    Waniek, J.J.5    Ersson, A.F.6
  • 66
    • 38349155750 scopus 로고    scopus 로고
    • The native bacterioplankton community in the central Baltic Sea is influenced by freshwater bacterial species
    • Riemann L, Leitet C, Pommier T, Simu K, Holmfeldt K, Larsson U, Hagström A. 2008. The native bacterioplankton community in the central Baltic Sea is influenced by freshwater bacterial species. Appl Environ Microbiol 74:503–515. http://dx.doi.org/10.1128/AEM.01983-07
    • (2008) Appl Environ Microbiol , vol.74 , pp. 503-515
    • Riemann, L.1    Leitet, C.2    Pommier, T.3    Simu, K.4    Holmfeldt, K.5    Larsson, U.6    Hagström, A.7
  • 67
    • 0033865159 scopus 로고    scopus 로고
    • Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities
    • Gasol JM, Del Giorgio PA. 2000. Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities. Sci Mar 64:197–224
    • (2000) Sci Mar , vol.64 , pp. 197-224
    • Gasol, J.M.1    Del Giorgio, P.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.