Characterization of the Punta Toro species complex (genus Phlebovirus, family Bunyaviridae)

Journal of General Virology

Volumn 96, Issue 8, 2015, Pages 2079-2085

  Palacios, Gustavo ^a   Wiley, Michael R ^a   Travassos da Rosa, Amelia P A ^b   Guzman, Hilda ^b   Quiroz, Evelia ^c,d   Savji, Nazir ^e   Carrera, Jean Paul ^c,f   Bussetti, Ana Valeria ^g   Ladner, Jason T ^a   Ian Lipkin, W ^g   Tesh, Robert B ^b  

^a UNITED STATES ARMY MEDICAL RESEARCH INSTITUTE OF INFECTIOUS DISEASES   (United States)

^b University of Texas Medical Branch School of Medicine   (United States)

^c Malaria Drug and Vaccine Evaluation Center   (Panama)

^d UNIVERSIDAD DE PANAMÁ   (Panama)

^e NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

^f School of Medicine Columbus University   (Panama)

^g Och Spine at New York Presbyterian Hospitals   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOCAPSID PROTEIN; RNA DIRECTED RNA POLYMERASE; VIRUS GLYCOPROTEIN; VIRUS ANTIBODY;

AMINO ACID SUBSTITUTION; ARTICLE; BACKACHE; BUNYAVIRIDAE; CAMPANA VIRUS; CAPIRA VIRUS; COCLE VIRUS; HEADACHE; HUMAN; LETICIA VIRUS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PUNTA TORO VIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SANDFLY FEVER; SOLDIER; VIRUS CHARACTERIZATION; VIRUS REPLICATION; VIRUS STRAIN; WAR; WEAKNESS; ANIMAL; BUNYAVIRUS INFECTION; CLASSIFICATION; CROSS REACTION; DISEASE CARRIER; FEVER; GENETICS; IMMUNOLOGY; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; PANAMA; PHLEBOVIRUS; PSYCHODIDAE; VIROLOGY;

BRUGMANSIA VERSICOLOR; BUENAVENTURA VIRUS; BUNYAVIRIDAE; PERU TOMATO MOSAIC VIRUS; PHLEBOVIRUS; PUNTA TORO VIRUS;

ANIMALS; ANTIBODIES, VIRAL; BUNYAVIRIDAE INFECTIONS; CROSS REACTIONS; FEVER; HUMANS; INSECT VECTORS; MOLECULAR SEQUENCE DATA; PANAMA; PHLEBOVIRUS; PHYLOGENY; PSYCHODIDAE;

EID: 84940184503     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/vir.0.000170     Document Type: Article

References (45)

1. Auguste, A. J., Carrington, C. V., Forrester, N. L., Popov, V. L., Guzman, H., Widen, S. G., Wood, T. G., Weaver, S. C. & Tesh, R. B. (2014). Characterization of a novel Negevirus and a novel Bunyavirus isolated from Culex (Culex) declarator mosquitoes in Trinidad. J Gen Virol 95, 481-485.
2. Bartelloni, P. J. & Tesh, R. B. (1976). Clinical and serologic responses of volunteers infected with phlebotomus fever virus (Sicilian type). Am J Trop Med Hyg 25, 456-462.
3. Beaty, B., Calisher, C. H. & Shope, R. E. (1989). Arboviruses. In Diagnostic Procedures for Viral, Rickettsial and Chlamydial Infections, pp. 979-1005. Edited by N. J. Schmidt & R. W. Emmons. Washington, DC: American Public Health Association.
4. Bishop, D. H., Calisher, C. H., Casals, J., Chumakov, M. P., Gaidamovich, S. Y., Hannoun, C., Lvov, D. K., Marshall, I. D., Oker- Blom, N. & other authors (1980). Bunyaviridae. Intervirology 14, 125-143.
5. Bowen, M. D., Trappier, S. G., Sanchez, A. J., Meyer, R. F., Goldsmith, C. S., Zaki, S. R., Dunster, L. M., Peters, C. J., Ksiazek & other authors (2001). A reassortant bunyavirus isolated from acute hemorrhagic fever cases in Kenya and Somalia. Virology 291, 185-190.
6. Briese, T., Bird, B., Kapoor, V., Nichol, S. T. & Lipkin, W. I. (2006). Batai and Ngari viruses: M segment reassortment and association with severe febrile disease outbreaks in East Africa. J Virol 80, 5627-5630.
7. Briese, T., Kapoor, V. & Lipkin, W. I. (2007). Natural M-segment reassortment in Potosi and Main Drain viruses: implications for the evolution of orthobunyaviruses. Arch Virol 152, 2237-2247.
8. Briese, T., Calisher, C. H. & Higgs, S. (2013). Viruses of the family Bunyaviridae: are all available isolates reassortants? Virology 446, 207-216.
9. Burt, F. J., Paweska, J. T., Ashkettle, B. & Swanepoel, R. (2009). Genetic relationship in southern African Crimean-Congo haemorrhagic fever virus isolates: evidence for occurrence of reassortment. Epidemiol Infect 137,1302-1308.
10. Centers for Disease Prevention and Control (2015). The International Catalogue of Arboviruses Including Certain Other Viruses of Vertebrates. https://wwwn.cdc.gov/arbocat/default.aspx.
11. Charrel, R. N., Moureau, G., Temmam, S., Izri, A., Marty, P., Parola, P., da Rosa, A. T., Tesh, R. B. & de Lamballerie, X. (2009). Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies in the Mediterranean. Vector Borne Zoonotic Dis 9, 519-530.
12. Collao, X., Palacios, G., de Ory, F., Sanbonmatsu, S., Pérez-Ruiz, M., Navarro, J. M., Molina, R., Hutchison, S. K., Lipkin, W. I. & other authors (2010). Granada virus: a natural phlebovirus reassortant of the sandfly fever Naples serocomplex with low seroprevalence in humans. Am J Trop Med Hyg 83, 760-765.
13. Cox-Foster, D. L., Conlan, S., Holmes, E. C., Palacios, G., Evans, J. D., Moran, N. A., Quan, P. L., Briese, T., Hornig, M. & other authors (2007). A metagenomic survey of microbes in honey bee colony collapse disorder. Science 318, 283-287.
14. Felsenstein, J. (1989). PHYLIP - phylogeny inference package (version 3.2). Cladistics 5, 164-166.
15. Henderson, W. W., Monroe, M. C., St Jeor, S. C., Thayer, W. P., Rowe, J. E., Peters, C. J. & Nichol, S. T. (1995). Naturally occurring Sin Nombre virus genetic reassortants. Virology 214, 602-610.
16. Holmes, E. C. (1998). Molecular epidemiology of dengue virus—the time for big science. Trop Med Int Health 3, 855-856.
17. Iroegbu, C. U. & Pringle, C. R. (1981). Genetic interactions among viruses of the Bunyamwera complex. J Virol 37, 383-394.
18. Kondiah, K., Swanepoel, R., Paweska, J. T. & Burt, F. J. (2010). A simple-probe real-time PCR assay for genotyping reassorted and non-reassorted isolates of Crimean-Congo hemorrhagic fever virus in southern Africa. J Virol Methods 169, 34-38.
19. Li, D., Schmaljohn, A. L., Anderson, K. & Schmaljohn, C. S. (1995). Complete nucleotide sequences of the M and S segments of two hantavirus isolates from California: evidence for reassortment in nature among viruses related to hantavirus pulmonary syndrome. Virology 206, 973-983.
20. Margulies, M., Egholm, M., Altman, W. E., Attiya, S., Bader, J. S., Bemben, L. A., Berka, J., Braverman, M. S., Chen, Y. J. & other authors (2005). Genome sequencing in microfabricated high-density picolitre reactors. Nature 437, 376-380.
21. Marklewitz, M., Handrick, S., Grasse, W., Kurth, A., Lukashev, A., Drosten, C., Ellerbrok, H., Leendertz, F. H., Pauli, G. & Junglen, S. (2011). Gouleako virus isolated from West African mosquitoes constitutes a proposed novel genus in the family Bunyaviridae. J Virol 85, 9227-9234.
22. Martin, D. & Rybicki, E. (2000). RDP: detection of recombination amongst aligned sequences. Bioinformatics 16, 562-563.
23. Matsuno, K., Weisend, C., Travassos da Rosa, A. P., Anzick, S. L., Dahlstrom, E., Porcella, S. F., Dorward, D. W., Yu, X. J., Tesh, R. B. & Ebihara, H. (2013). Characterization of the Bhanja serogroup viruses (Bunyaviridae): a novel species of the genus Phlebovirus and its relationship with other emerging tick-borne phleboviruses. J Virol 87, 3719-3728.
24. McMullan, L. K., Folk, S. M., Kelly, A. J., MacNeil, A., Goldsmith, C. S., Metcalfe, M. G., Batten, B. C., Albariño, C. G., Zaki, S. R. & other authors (2012). A new phlebovirus associated with severe febrile illness in Missouri. N Engl J Med 367, 834-841.
25. Nichol, S. T., Beaty, B. J., Elliott, R. M., Goldbach, R., Plyusin, A., Schmaljohn, C. & Tesh, R. (2005). Bunyaviridae. In Virus Taxonomy. Eight Report of the International Committee on Taxonomy of Viruses, pp. 695-716. Edited by C. M. Fauquet,M. A. Mayo, J. Maniloff, U. Desselberger & L. A. Ball. San Diego, CA: Elsevier Academic Press.
26. Nunes, M. R., Travassos da Rosa, A. P., Weaver, S. C., Tesh, R. B. & Vasconcelos, P. F. (2005). Molecular epidemiology of group C viruses (Bunyaviridae, Orthobunyavirus) isolated in the Americas. J Virol 79, 10561-10570.
27. Palacios, G., Druce, J., Du, L., Tran, T., Birch, C., Briese, T., Conlan, S., Quan, P. L., Hui, J. & other authors (2008). A new arenavirus in a cluster of fatal transplant-associated diseases. N Engl J Med 358, 991-998.
28. Palacios, G., da Rosa, A. T., Savji, N., Sze, W., Wick, I., Guzman, H., Hutchison, S., Tesh, R. & Lipkin, W. I. (2011a). Aguacate virus, a new antigenic complex of the genus Phlebovirus (family Bunyaviridae). J Gen Virol 92, 1445-1453.
29. Palacios, G., Tesh, R., Travassos da Rosa, A., Savji, N., Sze, W., Jain, K., Serge, R., Guzman, H., Guevara, C. & other authors (2011b). Characterization of the Candiru antigenic complex (Bunyaviridae: Phlebovirus), a highly diverse and reassorting group of viruses affecting humans in tropical America. J Virol 85, 3811-3820.
30. Palacios, G., Savji, N., Travassos da Rosa, A., Desai, A., Sanchez- Seco, M. P., Guzman, H., Lipkin, W. I. & Tesh, R. (2013a). Characterization of the Salehabad virus species complex of the genus Phlebovirus (Bunyaviridae). J Gen Virol 94, 837-842.
31. Palacios, G., Savji, N., Travassos da Rosa, A., Guzman, H., Yu, X., Desai, A., Rosen, G. E., Hutchison, S., Lipkin, W. I. & Tesh, R. (2013b). Characterization of the Uukuniemi virus group (Phlebovirus: Bunyaviridae): evidence for seven distinct species. J Virol 87, 3187-3195.
32. Palacios, G., Tesh, R., Savji, N., Travassos da Rosa, A. P., Guzman, H., Bussetti, A. V., Desai, A., Ladner, J., Sanchez-Seco, M. & Lipkin, W. I. (2014). Characterization of the Sandfly fever Naples species complex (genus Phlebovirus, family Bunyaviridae). J Gen Virol 95, 292-300.
33. Plyusnin, A., Beaty, B. J., Elliott, R. M., Goldbach, R., Kormelink, R., Lundkvist, A., Schmaljohn, C. S. & Tesh, R. B. (2012). Bunyaviridae. In Virus Taxonomy. Ninth Report of the International Committee on Taxonomy of Viruses, pp. 725-741. Edited by A. M. Q. King, M. J. Adams, E. B. Carstens & E. J. Lefkowitz. San Diego, CA: Elsevier Academic Press.
34. Posada, D. & Crandall, K. A. (2001). Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc Natl Acad Sci U S A 98, 13757-13762.
35. Pringle, C. R., Lees, J.F., Clark, W. & Elliott, R.M.(1984).Genomesubunit reassortment among Bunyaviruses analysed by dot hybridization using molecularly cloned complementary DNA probes. Virology 135, 244-256.
36. Rodriguez, L. L., Owens, J. H., Peters, C. J. & Nichol, S. T. (1998). Genetic reassortment among viruses causing hantavirus pulmonary syndrome. Virology 242, 99-106.
37. Saeed, M. F., Wang, H., Suderman, M., Beasley, D. W., Travassos da Rosa, A., Li, L., Shope, R. E., Tesh, R. B. & Barrett, A. D. (2001). Jatobal virus is a reassortant containing the small RNA of Oropouche virus. Virus Res 77, 25-30.
38. Salminen, M. O., Carr, J. K., Burke, D. S. & McCutchan, F. E. (1995). Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning. AIDS Res Hum Retroviruses 11, 1423-1425.
39. Smith, J. M. (1992). Analyzing the mosaic structure of genes. J Mol Evol 34, 126-129.
40. Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011). mega5:molecularevolutionarygeneticsanalysis usingmaximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28, 2731-2739.
41. Tesh, R. B., Chaniotis, B. N., Peralta, P. H. & Johnson, K. M. (1974). Ecology of viruses isolated from Panamanian phlebotomine sandflies. Am J Trop Med Hyg 23, 258-269.
42. Tesh, R. B., Boshell, J., Young, D. G., Morales, A., Corredor, A., Modi, G. B., Ferro de Carrasquilla, C., de Rodriquez, C. & Gaitan, M. O. (1986). Biology of Arboledas virus, a new phlebotomus fever serogroup virus (Bunyaviridae: Phlebovirus) isolated from sand flies in Colombia. Am J Trop Med Hyg 35, 1310-1316.
43. Yanase, T., Kato, T., Yamakawa, M., Takayoshi, K., Nakamura, K., Kokuba, T. & Tsuda, T. (2006). Genetic characterization of Batai virus indicates a genomic reassortment between orthobunyaviruses in nature. Arch Virol 151, 2253-2260.
44. Yanase, T., Aizawa, M., Kato, T., Yamakawa, M., Shirafuji, H. & Tsuda, T. (2010). Genetic characterization of Aino and Peaton virus field isolates reveals a genetic reassortment between these viruses in nature. Virus Res 153, 1-7.
45. Yu, X. J., Liang, M. F., Zhang, S. Y., Liu, Y., Li, J. D., Sun, Y. L., Zhang, L., Zhang, Q. F., Popov, V. L. & other authors (2011). Fever with thrombocytopenia associated with a novel bunyavirus in China. N Engl J Med 364, 1523-1532.