Characterization of the Salehabad virus species complex of the genus Phlebovirus (Bunyaviridae)

Journal of General Virology

Volumn 94, Issue PART4, 2013, Pages 837-842

  Palacios, Gustavo ^a,b   Savji, Nazir ^b,e   da Rosa, Amelia Travassos ^c   Desai, Aaloki ^b   Sanchez Seco, Maria Paz ^d   Guzman, Hilda ^c   Lipkin, W Ian ^b   Tesh, Robert ^c  

^a UNITED STATES ARMY MEDICAL RESEARCH INSTITUTE OF INFECTIOUS DISEASES   (United States)

^b Och Spine at New York Presbyterian Hospitals   (United States)

^c University of Texas Medical Branch School of Medicine   (United States)

^d INSTITUTO DE SALUD CARLOS III   (Spain)

^e NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADRIA VIRUS; AFRICA; ARBIA VIRUS; ARTICLE; ARUMOWOT VIRUS; ASIA; GENE SEQUENCE; GEOGRAPHIC DISTRIBUTION; MOLECULAR PHYLOGENY; NONHUMAN; ODRENISROU VIRUS; PHLEBOVIRUS; PRIORITY JOURNAL; SALEHABAD VIRUS; SOUTHERN EUROPE; VIRUS CHARACTERIZATION;

EID: 84875662089     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/vir.0.048850-0     Document Type: Article

References (36)

1. Anagnostou, V., Pardalos, G., Athanasiou-Metaxa, M. & Papa, A. (2011). Novel phlebovirus in febrile child, Greece. Emerg Infect Dis 17, 940-941.
2. Aquino, V. H., Moreli, M. L. & Moraes Figueiredo, L. T. (2003). Analysis of oropouche virus L protein amino acid sequence showed the presence of an additional conserved region that could harbour an important role for the polymerase activity. Arch Virol 148, 19-28.
3. Beaty, B. J., Calisher, C. H. & Shope, R. E. (1989). Arboviruses. In Diagnostic Procedures for Viral, Rickettsial and Chlamydial Infections, pp. 797-855. Edited by N. J. Schmidt & R. W. Emmons. Washington, DC: American Public Health Association.
4. Bendtsen, J. D., Nielsen, H., von Heijne, G. & Brunak, S. (2004). Improved prediction of signal peptides: SignalP 3.0. J Mol Biol 340, 783-795.
5. Charrel, R. N., Moureau, G., Temmam, S., Izri, A., Marty, P., Parola, P., da Rosa, A. T., Tesh, R. B. & de Lamballerie, X. (2009). Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies in the Mediterranean. Vector Borne Zoonotic Dis 9, 519-530.
6. Claros, M. G. & von Heijne, G. (1994). TopPred II: an improved software for membrane protein structure predictions. Comput Appl Biosci 10, 685-686.
7. Collao, X., Palacios, G., Sanbonmatsu-Gámez, S., Pérez-Ruiz, M., Negredo, A. I., Navarro-Marí, J. M., Grandadam, M., Aransay, A. M., Lipkin, W. I. & other authors (2009). Genetic diversity of Toscana virus. Emerg Infect Dis 15, 574-577.
8. Cox-Foster, D. L., Conlan, S., Holmes, E. C., Palacios, G., Evans, J. D., Moran, N. A., Quan, P. L., Briese, T., Hornig, M. & other authors (2007). A metagenomic survey of microbes in honey bee colony collapse disorder. Science 318, 283-287.
9. Gerrard, S. R. & Nichol, S. T. (2002). Characterization of the Golgi retention motif of Rift Valley fever virus G(N) glycoprotein. J Virol 76, 12200-12210.
10. Grò, M. C., Di Bonito, P., Fortini, D., Mochi, S. & Giorgi, C. (1997). Completion of molecular characterization of Toscana phlebovirus genome: nucleotide sequence, coding strategy of M genomic segment and its amino acid sequence comparison to other phleboviruses. Virus Res 51, 81-91.
11. Ihara, T., Smith, J., Dalrymple, J. M. & Bishop, D. H. (1985). Complete sequences of the glycoproteins and M RNA of Punta Toro phlebovirus compared to those of Rift Valley fever virus. Virology 144, 246-259.
12. Kahsay, R. Y., Gao, G. & Liao, L. (2005). An improved hidden Markov model for transmembrane protein detection and topology prediction and its applications to complete genomes. Bioinformatics 21, 1853-1858.
13. Kall, L., Krogh, A. & Sonnhammer, E. L. (2004). A combined transmembrane topology and signal peptide prediction method. J Mol Biol 338, 1027-1036.
14. Krogh, A., Larsson, B., von Heijne, G. & Sonnhammer, E. L. (2001). Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305, 567-580.
15. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence align- ment. Brief Bioinform 5, 150-163.
16. Le May, N., Gauliard, N., Billecocq, A. & Bouloy, M. (2005). The N terminus of Rift Valley fever virus nucleoprotein is essential for dimerization. J Virol 79, 11974-11980.
17. Margulies, M., Egholm, M., Altman, W. E., Attiya, S., Bader, J. S., Bemben, L. A., Berka, J., Braverman, M. S., Chen, Y. J. & other authors (2005). Genome sequencing in microfabricated high-density picolitre reactors. Nature 437, 376-380.
18. Matsuoka, Y., Chen, S. Y., Holland, C. E. & Compans, R. W. (1996). Molecular determinants of Golgi retention in the Punta Toro virus G1 protein. Arch Biochem Biophys 336, 184-189.
19. Nichol, S. T., Beaty, B. J., Elliott, R. M., Goldbach, R., Plyusnin, A., Schmaljohn, C. S. & Tesh, R. B. (2005). Family Bunyaviridae. In Virus Taxonomy Eighth Report of the International Committee on Taxonomy of Viruses, pp. 695-716. Edited by C. M. Fauquet, M. A. Mayo, J. Desselberger & L. A. Ball. San Diego: Elsevier Academic Press.
20. Palacios, G., Quan, P. L., Jabado, O. J., Conlan, S., Hirschberg, D. L., Liu, Y., Zhai, J., Renwick, N., Hui, J. & other authors (2007). Panmicrobial oligonucleotide array for diagnosis of infectious diseases. Emerg Infect Dis 13, 73-81.
21. Palacios, G., Druce, J., Du, L., Tran, T., Birch, C., Briese, T., Conlan, S., Quan, P. L., Hui, J. & other authors (2008). A new arenavirus in a cluster of fatal transplant-associated diseases. N Engl J Med 358, 991-998.
22. Palacios, G., da Rosa, A. T., Savji, N., Sze, W., Wick, I., Guzman, H., Hutchison, S., Tesh, R. & Lipkin, W. I. (2011a). Aguacate virus, a new antigenic complex of the genus Phlebovirus (family Bunyaviridae). J Gen Virol 92, 1445-1453.
23. Palacios, G., Tesh, R., Travassos da Rosa, A., Savji, N., Sze, W., Jain, K., Serge, R., Guzman, H., Guevara, C. & other authors (2011b). Characterization of the Candiru antigenic complex (Bunyaviridae: Phlebovirus), a highly diverse and reassorting group of viruses affecting humans in tropical America. J Virol 85, 3811-3820.
24. Palacios, G.(2012). Characterization of the Uukuniemi virus group (Phlebovirus: Bunyaviridae): demonstration that Severe fever with thrombocytopenia syndrome virus and Heartland virus are related members. J Virol (in press).
25. Papa, A., Velo, E. & Bino, S. (2011). A novel phlebovirus in Albanian sandflies. Clin microbiol infect 17, 585-587.
26. Peters, C. J., Makino, S. & Morrill, J. C. (2011). Rift Valley Fever. In Tropical Infecitous Diseases Principals, Pathogens and Practice, 3rd edn, pp. 462-465. Edited by R. L. Guerrant, D. H. Walker & P. F. Weller. Philadelphia: Suanders Elsevier.
27. Poch, O., Sauvaget, I., Delarue, M. & Tordo, N. (1989). Identification of four conserved motifs among the RNA-dependent polymerase encoding elements. EMBO J 8, 3867-3874.
28. Tesh, R. B. (1989). Phlebotomus fevers. In The Arboviruses: Epidemiology and Ecology, pp. 15-27. Edited by T. P. Monath. Boca Raton, FL: CRC Press, Inc.
29. Tesh, R. B., Saidi, S., Gajdamovic, S. J., Rodhain, F. & VesenjakHirjan, J. (1976). Serological studies on the epidemiology of sandfly fever in the Old World. Bull World Health Organ 54, 663-674.
30. Tesh, R. B., Peters, C. J. & Meegan, J. M. (1982). Studies on the antigenic relationship among phleboviruses. Am J Trop Med Hyg 31, 149-155.
31. Travassos da Rosa, A. P., Tesh, R. B., Pinheiro, F. P., Travassos da Rosa, J. F. & Peterson, N. E. (1983). Characterization of eight new phlebotomus fever serogroup arboviruses (Bunyaviridae: Phlebovirus) from the Amazon region of Brazil. Am J Trop Med Hyg 32, 1164-1171.
32. Valentini, M., Valassina, M., Savellini, G. G. & Cusi, M. G. (2008). Nucleotide variability of Toscana virus M segment in strains isolated from clinical cases. Virus Res 135, 187-190.
33. Verani, P., Ciufolini, M. G., Caciolli, S., Renzi, A., Nicoletti, L., Sabatinelli, G., Bartolozzi, D., Volpi, G., Amaducci, L. & other authors (1988). Ecology of viruses isolated from sand flies in Italy and characterized of a new Phlebovirus (Arabia virus). Am J Trop Med Hyg 38, 433-439.
34. Xiong, Y. & Eickbush, T. H. (1990). Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J 9, 3353-3362.
35. Xu, F., Liu, D., Nunes, M. R., DA Rosa, A. P., Tesh, R. B. & Xiao, S. Y. (2007). Antigenic and genetic relationships among Rift Valley fever virus and other selected members of the genus Phlebovirus (Bunyaviridae). Am J Trop Med Hyg 76, 1194-1200.
36. Yu, X. J., Liang, M. F., Zhang, S. Y., Liu, Y., Li, J. D., Sun, Y. L., Zhang, L., Zhang, Q. F., Popov, V. L. & other authors (2011). Fever with thrombocytopenia associated with a novel bunyavirus in China. N Engl J Med 364, 1523-1532.