메뉴 건너뛰기




Volumn 53, Issue 9, 2015, Pages 2900-2907

Cohort study of airway mycobiome in adult cystic fibrosis patients: Differences in community structure between fungi and bacteria reveal predominance of transient fungal elements

Author keywords

[No Author keywords available]

Indexed keywords

INTERNAL TRANSCRIBED SPACER; RNA 16S; BACTERIAL DNA; FUNGAL DNA; RIBOSOME DNA; SPACER DNA;

EID: 84940061917     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.01094-15     Document Type: Article
Times cited : (63)

References (43)
  • 1
    • 84881550589 scopus 로고    scopus 로고
    • Striking a balance: Fungal commensalism versus pathogenesis
    • Iliev ID, Underhill DM. 2013. Striking a balance: fungal commensalism versus pathogenesis. Curr Opin Microbiol 16:366-373. http://dx.doi.org/10.1016/j.mib.2013.05.004.
    • (2013) Curr Opin Microbiol , vol.16 , pp. 366-373
    • Iliev, I.D.1    Underhill, D.M.2
  • 2
    • 84990454730 scopus 로고
    • Fungal spores in lung and sputum
    • Mullins J, Seaton A. 1978. Fungal spores in lung and sputum. Clin Allergy 8:525-533. http://dx.doi.org/10.1111/j.1365-2222.1978.tb01506.x.
    • (1978) Clin Allergy , vol.8 , pp. 525-533
    • Mullins, J.1    Seaton, A.2
  • 5
    • 84879786685 scopus 로고    scopus 로고
    • The emerging world of the fungal microbiome
    • Huffnagle GB, Noverr MC. 2013. The emerging world of the fungal microbiome. Trends Microbiol 21:334-341. http://dx.doi.org/10.1016/j/tim.2013.04.002.
    • (2013) Trends Microbiol , vol.21 , pp. 334-341
    • Huffnagle, G.B.1    Noverr, M.C.2
  • 6
    • 84879564121 scopus 로고    scopus 로고
    • The role of the lung microbiome in health and disease: A National Heart, Lung, and Blood Institute workshop report
    • Huang YJ, Charlson ES, Collman RG, Colombini-Hatch S, Martinez FD, Senior RM. 2013. The role of the lung microbiome in health and disease: a National Heart, Lung, and Blood Institute workshop report.Am J Respir Crit Care Med 187:1382-1387. http://dx.doi.org/10.1164/rccm/201303-0488WS.
    • (2013) Am J Respir Crit Care Med , vol.187 , pp. 1382-1387
    • Huang, Y.J.1    Charlson, E.S.2    Collman, R.G.3    Colombini-Hatch, S.4    Martinez, F.D.5    Senior, R.M.6
  • 7
    • 37749013600 scopus 로고    scopus 로고
    • Cystic fibrosis
    • Davies JC, Alton EWFW, Bush A. 2007. Cystic fibrosis. BMJ 335:1255-1259. http://dx.doi.org/10.1136/bmj.39391.713229.AD.
    • (2007) BMJ , vol.335 , pp. 1255-1259
    • Davies, J.C.1    Ewfw, A.2    Bush, A.3
  • 8
    • 77950682572 scopus 로고    scopus 로고
    • The changing microbial epidemiology in cystic fibrosis
    • Lipuma JJ. 2010. The changing microbial epidemiology in cystic fibrosis. Clin Microbiol Rev 23:299-323. http://dx.doi.org/10.1128/CMR.00068-09.
    • (2010) Clin Microbiol Rev , vol.23 , pp. 299-323
    • LiPuma, J.J.1
  • 9
    • 78751559949 scopus 로고    scopus 로고
    • Clinical significance of microbial infection and adaptation in cystic fibrosis
    • Hauser AR, Jain M, Bar-Meir M, McColley SA. 2011. Clinical significance of microbial infection and adaptation in cystic fibrosis. Clin Microbiol Rev 24:29-70. http://dx.doi.org/10.1128/CMR.00036-10.
    • (2011) Clin Microbiol Rev , vol.24 , pp. 29-70
    • Hauser, A.R.1    Jain, M.2    Bar-Meir, M.3    McColley, S.A.4
  • 11
    • 77955561949 scopus 로고    scopus 로고
    • Characteristics of pathogenic fungi and antifungal therapy in cystic fibrosis
    • Mller F-MC, Seidler M. 2010. Characteristics of pathogenic fungi and antifungal therapy in cystic fibrosis. Expert Rev Anti Infect Ther 8:957-964. http://dx.doi.org/10.1586/eri.10.72.
    • (2010) Expert Rev Anti Infect Ther , vol.8 , pp. 957-964
    • F-Mc, M.1    Seidler, M.2
  • 12
    • 84881297014 scopus 로고    scopus 로고
    • Rasamsonia argillacea species complex: Taxonomy, pathogenesis and clinical relevance
    • Giraud S, Favennec L, Bougnoux M-E, Bouchara J-P. 2013. Rasamsonia argillacea species complex: taxonomy, pathogenesis and clinical relevance. Future Microbiol 8:967-978. http://dx.doi.org/10.2217/fmb.13.63.
    • (2013) Future Microbiol , vol.8 , pp. 967-978
    • Giraud, S.1    Favennec, L.2    Bougnoux, M.-E.3    Bouchara, J.-P.4
  • 13
    • 67449104896 scopus 로고    scopus 로고
    • Occurrence and relevance of filamentous fungi in respiratory secretions of patients with cystic fibrosis-a review
    • Pihet M, Carrere J, Cimon B, Chabasse D, Delhaes L, Symoens F, Bouchara J-P. 2009. Occurrence and relevance of filamentous fungi in respiratory secretions of patients with cystic fibrosis-a review. Med Mycol 47:387-397. http://dx.doi.org/10.1080/13693780802609604.
    • (2009) Med Mycol , vol.47 , pp. 387-397
    • Pihet, M.1    Carrere, J.2    Cimon, B.3    Chabasse, D.4    Delhaes, L.5    Symoens, F.6    Bouchara, J.-P.7
  • 16
    • 84923163970 scopus 로고    scopus 로고
    • High individuality of respiratory bacterial communities in a large cohort of adult cystic fibrosis patients under continuous antibiotic treatment
    • Kramer R, Sauer-Heilborn A, Welte T, Jauregui R, Brettar I, Guzman CA, Höfle MG. 2015. High individuality of respiratory bacterial communities in a large cohort of adult cystic fibrosis patients under continuous antibiotic treatment. PLoS One 10:e0117436. http://dx.doi.org/10.1371/journal.pone.0117436.
    • (2015) PLoS One , vol.10 , pp. e0117436
    • Kramer, R.1    Sauer-Heilborn, A.2    Welte, T.3    Jauregui, R.4    Brettar, I.5    Guzman, C.A.6    Höfle, M.G.7
  • 18
    • 84859972408 scopus 로고    scopus 로고
    • Nuclear ribosomal internal transcribed spacer (ITS) region as a universalDNAbarcode marker for fungi
    • Fungal Barcoding Consortium
    • Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W, Fungal Barcoding Consortium. 2012. Nuclear ribosomal internal transcribed spacer (ITS) region as a universalDNAbarcode marker for fungi. Proc Natl Acad SciUSA109:6241-6246. http://dx.doi.org/10.1073/pnas.1117018109.
    • (2012) Proc Natl Acad Sci USA , vol.109 , pp. 6241-6246
    • Schoch, C.L.1    Seifert, K.A.2    Huhndorf, S.3    Robert, V.4    Spouge, J.L.5    Levesque, C.A.6    Chen, W.7
  • 20
    • 33644952712 scopus 로고    scopus 로고
    • Composition and dynamics of bacterial communities of a drinking water supply system as assessed by RNA-and DNA-based 16S rRNA gene fingerprinting
    • Eichler S, Christen R, Höltje C, Westphal P, Bötel J, Brettar I, Mehling A, Höfle MG. 2006. Composition and dynamics of bacterial communities of a drinking water supply system as assessed by RNA-and DNA-based 16S rRNA gene fingerprinting. Appl Environ Microbiol 72:1858-1872. http://dx.doi.org/10.1128/AEM.72.3.1858-1872.2006.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 1858-1872
    • Eichler, S.1    Christen, R.2    Höltje, C.3    Westphal, P.4    Bötel, J.5    Brettar, I.6    Mehling, A.7    Höfle, M.G.8
  • 21
    • 0025835296 scopus 로고
    • Fast and sensitive silver staining of DNA in polyacrylamide gels
    • Bassam BJ, Caetano-Anollés G, Gresshoff PM. 1991. Fast and sensitive silver staining of DNA in polyacrylamide gels. Anal Biochem 196:80-83. http://dx.doi.org/10.1016/0003-2697(91)90120-I.
    • (1991) Anal Biochem , vol.196 , pp. 80-83
    • Bassam, B.J.1    Caetano-Anollés, G.2    Gresshoff, P.M.3
  • 24
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739. http://dx.doi.org/10.1093/molbev/msr121.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 27
    • 83655191007 scopus 로고    scopus 로고
    • The rare bacterial biosphere
    • Pedrs-Ali C. 2012. The rare bacterial biosphere. Annu Rev Mar Sci 4:449-466. http://dx.doi.org/10.1146/annurev-marine-120710-100948.
    • (2012) Annu Rev Mar Sci , vol.4 , pp. 449-466
    • Pedrs-Ali, C.1
  • 28
    • 66149150877 scopus 로고    scopus 로고
    • Microbial community structure and its functional implications
    • Fuhrman JA. 2009. Microbial community structure and its functional implications. Nature 459:193-199. http://dx.doi.org/10.1038/nature08058.
    • (2009) Nature , vol.459 , pp. 193-199
    • Fuhrman, J.A.1
  • 29
    • 33746255217 scopus 로고    scopus 로고
    • Use of 16S rRNA gene profiling by terminal restriction fragment length polymorphism analysis to compare bacterial communities in sputum and mouthwash samples from patients with cystic fibrosis
    • Rogers GB, Carroll MP, Serisier DJ, Hockey PM, Jones G, Kehagia V, Connett GJ, Bruce KD. 2006. Use of 16S rRNA gene profiling by terminal restriction fragment length polymorphism analysis to compare bacterial communities in sputum and mouthwash samples from patients with cystic fibrosis. J Clin Microbiol 44:2601-2604. http://dx.doi.org/10.1128/JCM.02282-05.
    • (2006) J Clin Microbiol , vol.44 , pp. 2601-2604
    • Rogers, G.B.1    Carroll, M.P.2    Serisier, D.J.3    Hockey, P.M.4    Jones, G.5    Kehagia, V.6    Connett, G.J.7    Bruce, K.D.8
  • 30
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • The Human Microbiome Project Consortium
    • The Human Microbiome Project Consortium. 2012. Structure, function and diversity of the healthy human microbiome. Nature 486:207-214. http://dx.doi.org/10.1038/nature11234.
    • (2012) Nature , vol.486 , pp. 207-214
  • 33
    • 78650586813 scopus 로고    scopus 로고
    • Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis
    • Guss AM, Roeselers G, Newton ILG, Young CR, Klepac-Ceraj V, Lory S, Cavanaugh CM. 2011. Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis. ISME J 5:20-29. http://dx.doi.org/10.1038/ismej.2010.88.
    • (2011) ISME J , vol.5 , pp. 20-29
    • Guss, A.M.1    Roeselers, G.2    Ilg, N.3    Young, C.R.4    Klepac-Ceraj, V.5    Lory, S.6    Cavanaugh, C.M.7
  • 36
    • 4544330253 scopus 로고    scopus 로고
    • Cystic Fibrosis Foundation, Cystic Fibrosis Foundation, Bethesda, MD
    • Cystic Fibrosis Foundation. 2012. Patient registry 2011 annual data report. Cystic Fibrosis Foundation, Bethesda, MD.
    • (2012) Patient Registry 2011 Annual Data Report
  • 37
    • 0037288208 scopus 로고    scopus 로고
    • Prevalence of Aspergillus fumigatus and other fungal species in the sputum of adult patients with cystic fibrosis
    • Bakare N, Rickerts V, Bargon J, Just-Nbling G. 2003. Prevalence of Aspergillus fumigatus and other fungal species in the sputum of adult patients with cystic fibrosis. Mycoses 46:19-23. http://dx.doi.org/10.1046/j/1439-0507.2003.00830.x.
    • (2003) Mycoses , vol.46 , pp. 19-23
    • Bakare, N.1    Rickerts, V.2    Bargon, J.3    Just-Nbling, G.4
  • 38
    • 40649090431 scopus 로고    scopus 로고
    • Prevalence and antimicrobial susceptibility of microorganisms isolated from sputa of patients with cystic fibrosis
    • Valenza G, Tappe D, Turnwald D, Frosch M, König C, Hebestreit H, Abele-Horn M. 2008. Prevalence and antimicrobial susceptibility of microorganisms isolated from sputa of patients with cystic fibrosis. J Cyst Fibros 7:123-127. http://dx.doi.org/10.1016/j.jcf.2007.06.006.
    • (2008) J Cyst Fibros , vol.7 , pp. 123-127
    • Valenza, G.1    Tappe, D.2    Turnwald, D.3    Frosch, M.4    König, C.5    Hebestreit, H.6    Abele-Horn, M.7
  • 39
    • 74949111651 scopus 로고    scopus 로고
    • Persistence of Candida species in the respiratory tract of cystic fibrosis patients
    • Muthig M, Hebestreit A, Ziegler U, Seidler M, Mller F-MC. 2010. Persistence of Candida species in the respiratory tract of cystic fibrosis patients. Med Mycol 48:56-63. http://dx.doi.org/10.3109/13693780802716532.
    • (2010) Med Mycol , vol.48 , pp. 56-63
    • Muthig, M.1    Hebestreit, A.2    Ziegler, U.3    Seidler, M.4    F-Mc, M.5
  • 40
    • 0035139892 scopus 로고    scopus 로고
    • Comparison of the hydrophobic properties of Candida albicans and Candida dubliniensis
    • Hazen KC, Wu JG, Masuoka J. 2001. Comparison of the hydrophobic properties of Candida albicans and Candida dubliniensis. Infect Immun 69:779-786. http://dx.doi.org/10.1128/IAI.69.2.779-786.2001.
    • (2001) Infect Immun , vol.69 , pp. 779-786
    • Hazen, K.C.1    Wu, J.G.2    Masuoka, J.3
  • 41
    • 0036186967 scopus 로고    scopus 로고
    • Recovery of Candida dubliniensis from sputum of cystic fibrosis patients
    • Peltroche-Llacsahuanga H, Döhmen H, Haase G. 2002. Recovery of Candida dubliniensis from sputum of cystic fibrosis patients. Mycoses 45: 15-18. http://dx.doi.org/10.1046/j.0933-7407.2001.00719.x.
    • (2002) Mycoses , vol.45 , pp. 15-18
    • Peltroche-Llacsahuanga, H.1    Döhmen, H.2    Haase, G.3
  • 42
    • 0026671894 scopus 로고
    • Optimum use of selective plated media in primary processing of respiratory tract specimens from patients with cystic fibrosis
    • Doern GV, Brogden-Torres B. 1992. Optimum use of selective plated media in primary processing of respiratory tract specimens from patients with cystic fibrosis. J Clin Microbiol 30:2740-2742.
    • (1992) J Clin Microbiol , vol.30 , pp. 2740-2742
    • Doern, G.V.1    Brogden-Torres, B.2
  • 43
    • 85047691117 scopus 로고
    • Mould spores and yeasts in outdoor air
    • Rantio-Lehtimki A. 1985. Mould spores and yeasts in outdoor air. Allergy 40(Suppl 3):S17-S20.
    • (1985) Allergy , vol.40 , pp. S17-S20
    • Rantio-Lehtimki, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.