Different responses of arbuscular mycorrhizal fungal community to day-time and night-time warming in a semiarid steppe

Chinese Science Bulletin

Volumn 59, Issue 35, 2014, Pages 5080-5089

  Kim, Yongchan ^a,b   Gao, Cheng ^a   Zheng, Yong ^a   Yang, Wei ^a,b   Chen, Liang ^a,b   He, Xinhua ^c   Wan, Shiqiang ^d   Guo, Liang Dong ^a  

^a INSTITUTE OF MICROBIOLOGY   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

^c UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^d HENAN UNIVERSITY   (China)

Author keywords

Abundance; Arbuscular mycorrhiza; Community composition; Day time warming; Night time warming; Pyrosequencing; Semiarid steppe

Indexed keywords

EID: 84939885485     PISSN: 10016538     EISSN: 18619541     Source Type: Journal    
DOI: 10.1007/s11434-014-0602-1     Document Type: Article

References (49)

1. IPCC (2007) Climate change 2007: the physical science basis: summary for policy makers. Cambridge University Press, Cambridge
2. Yang H, Wu M, Liu W et al (2011) Community structure and composition in response to climate change in a temperate steppe. Glob Change Biol 17:452–465
3. Hoeppner SS, Dukes JS (2012) Interactive responses of old-field plant growth and composition to warming and precipitation. Glob Change Biol 18:1754–1768
4. Yang W, Zheng Y, Gao C et al (2013) The arbuscular mycorrhizal fungal community response to warming and grazing differs between soil and roots on the Qinghai-Tibetan Plateau. PLoS One 8:e76447
5. Rillig MC, Wright SF, Shaw MR et al (2002) Artificial climate warming positively affects arbuscular mycorrhizae but decreases soil aggregate water stability in an annual grassland. Oikos 97:52–58
6. Heinemeyer A, Fitter AH (2004) Impact of temperature on the arbuscular mycorrhizal (AM) symbiosis: growth responses of the host plant and its AM fungal partner. J Exp Bot 55:525–534
7. Smith SE, Read DJ (2008) Mycorrhizal symbiosis, 3rd edn. Academic Press, Cambridge
8. Wardle DA (2006) The influence of biotic interactions on soil biodiversity. Ecol Lett 9:870–886
9. van der Heijden MGA, Klironomos JN, Ursic M et al (1998) Mycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivity. Nature 396:69–72
10. van der Heijden MGA, Verkade S, de Bruin SJ (2008) Mycorrhizal fungi reduce the negative effects of nitrogen enrichment on plant community structure in dune grassland. Glob Change Biol 14:2626–2635
11. Heinemeyer A, Ridgway KP, Edwards EJ et al (2003) Impact of soil warming and shading on colonization and community structure of arbuscular mycorrhizal fungi in roots of a native grassland community. Glob Change Biol 10:52–64
12. Staddon PL, Thompson K, Jakobsen I et al (2003) Mycorrhizal fungal abundance is affected by long-term climatic manipulations in the field. Glob Change Biol 9:186–194
13. Compant S, van der Heijden MGA, Sessitsch A (2010) Climate change effects on beneficial plant-microorganism interactions. FEMS Microbiol Ecol 73:197–214
14. Büscher M, Zavalloni C, de Boulois HD et al (2012) Effects of arbuscular mycorrhizal fungi on grassland productivity are altered by future climate and below-ground resource availability. Environ Exp Bot 81:62–71
15. Heinemeyer A, Ineson P, Ostle N et al (2006) Respiration of the external mycelium in the arbuscular mycorrhizal symbiosis shows strong dependence on recent photosynthates and acclimation to temperature. New Phytol 171:159–170
16. Easterling DR, Horton B, Jones PD et al (1997) Maximum and minimum temperature trends for the globe. Science 277:364–367
17. Alward RD, Detling JK, Milchunas DG (1999) Grassland vegetation changes and nocturnal global warming. Science 283:229–231
18. Lobell DB (2007) Changes in diurnal temperature range and national cereal yields. Agr Forest Meteorol 145:229–238
19. Wan S, Xia J, Liu W et al (2009) Photosynthetic overcompensation under nocturnal warming enhances grassland carbon sequestration. Ecology 90:2700–2710
20. Bai W, Xia J, Wan S et al (2012) Day and night warming have different effect on root lifespan. Biogeosciences 9:375–384
21. Xia J, Wan S (2012) The effects of warming-shifted plant phenology on ecosystem carbon exchange are regulated by precipitation in a semi-arid grassland. PLoS One 7:e32088
22. Xia J, Han Y, Zhang Z et al (2009) Effects of diurnal warming on soil respiration are not equal to the summed effects of day and night warming in a temperate steppe. Biogeosciences 6:1361–1370
23. Kalembasa SJ, Jenkinson DS (1973) A comparative study of titrimetric and gravimetric methods for determination of organic carbon in soil. J Sci Food Agr 24:1085–1090
24. Lu RK (1999) Soil and agro-chemical analytical methods. Agricultural Science and Technology Press, Beijing
25. Xia J, Niu S, Wan S (2009) Response of ecosystem carbon exchange to warming and nitrogen addition during two hydrologically contrasting growing seasons in a temperate steppe. Glob Change Biol 15:1544–1556
26. Daniels BA, Skipper HD (1982) Methods for the recovery and quantitative estimation of propagules from soil. In: Schenck NC (ed) Methods and principles of mycorrhizal research. American Phytopathological Society, St. Paul, Minn., pp 29–37
27. 2 enrichment in two California annual grasslands. Oecologia 119:572–577
28. Miller RM, Reinhardt DR, Jastrow JD (1995) External hyphal production of vesicular-arbuscular mycorrhizal fungi in pasture and tallgrass prairie communities. Oecologia 103:17–23
29. Schwarzott D, Schüβler A (2001) A simple and reliable method for SSU rRNA gene DNA extraction, amplification, and cloning from single AM fungal spores. Mycorrhiza 10:203–207
30. White TJ, Bruns TD, Lee SB et al (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ et al (eds) PCR Protocols: a guide to methods and applications. Academic Press, San Diego, pp 315–321
31. Simon L, Lalonde M, Bruns TD (1992) Specific amplification of 18S fungal ribosomal genes from vesicular-arbuscular endomycorrhizal fungi colonizing roots. Appl Environ Microbiol 58:291–295
32. Lee J, Lee S, Young JPW (2008) Improved PCR primers for the detection and identification of arbuscular mycorrhizal fungi. FEMS Microbiol Ecol 65:339–349
33. Schloss PD, Westcott SL, Ryabi T et al (2009) Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75:7537–7541
34. Pruesse E, Quast C, Knittel K et al (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35:7188–7196
35. Öpik M, Vanatoa A, Vanatoa E et al (2010) The online database Maarj AM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota). New Phytol 188:223–241
36. Lumini E, Orgiazzi A, Borriello R et al (2010) Disclosing arbuscular mycorrhizal fungal biodiversity in soil through a land-use gradient using a pyrosequencing approach. Environ Microbiol 12:2165–2179
37. Li WZ, Godzik A (2006) Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22:1658–1659
38. Lindahl BD, Nilsson RH, Tedersoo L et al (2013) Fungal community analysis by high-throughput sequencing of amplified markers—a user’s guide. New Phytol 199:288–299
39. Tamura K, Peterson D, Peterson N et al (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739
40. Oksanen J, Kindt R, Legendre P et al (2007) The vegan package. In: http://vegan.r-forge.r-project.org/
41. Goslee SC, Urban DL (2007) The ecodist package for dissimilarity-based analysis of ecological data. J Stat Softw 22:1–19
42. Development Core Team R (2011) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria
43. 2, cutting frequency, and differential day/night atmospheric warming on root growth and turnover of Phalaris swards. Glob Change Biol 13:1040–1052
44. Hernandez RR, Allen MF (2013) Diurnal patterns of productivity of arbuscular mycorrhizal fungi revealed with the soil ecosystem observatory. New Phytol 200:547–557
45. Liu Y, Shi G, Mao L et al (2012) Direct and indirect influences of 8 yr of nitrogen and phosphorus fertilization on Glomeromycota in an alpine meadow ecosystem. New Phytol 194:523–535
46. Chen Y, Zhang X, Ye J et al (2014) Six-year fertilization modifies the biodiversity of arbuscular mycorrhizal fungi in a temperate steppe in Inner Mongolia. Soil Biol Biochem 69:371–381
47. Koske RE (1987) Distribution of VA mycorrhizal fungi along a latitudinal temperature-gradient. Mycologia 79:55–68
48. Hazard C, Gosling P, van der Gast CJ et al (2013) The role of local environment and geographical distance in determining community composition of arbuscular mycorrhizal fungi at the landscape scale. ISME J 7:498–508
49. Yang A, Hu J, Lin X et al (2012) Arbuscular mycorrhizal fungal community structure and diversity in response to 3-year conservation tillage management in a sandy loam soil in North China. J Soil Sediment 12:835–843