-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
COI: 1:CAS:528:DyaK2sXlvFyhu7w%3D, PID: 9254694
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389–3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
21344468129
-
Long-term persistence of organic chemicals in sewage sludge-amended agriculture land: a soil quality perspective
-
COI: 1:CAS:528:DyaK28Xktlaqtg%3D%3D
-
Beck AJ, Alcock RE, Wilson SC, Wang MJ, Wild SR (1995) Long-term persistence of organic chemicals in sewage sludge-amended agriculture land: a soil quality perspective. Adv Agron 55:345–391
-
(1995)
Adv Agron
, vol.55
, pp. 345-391
-
-
Beck, A.J.1
Alcock, R.E.2
Wilson, S.C.3
Wang, M.J.4
Wild, S.R.5
-
3
-
-
0030011823
-
Molecular microbial diversity of an agricultural soil in Wisconsin
-
COI: 1:CAS:528:DyaK28XjtlGgsr0%3D, PID: 8787391
-
Borneman J, Skroch PW, O'Sullivan KM, Palus JA, Rumjanek NG, Jansen JL, Nienhuis J, Triplett EW (1996) Molecular microbial diversity of an agricultural soil in Wisconsin. Appl Environ Microbiol 62(6):1935–1943
-
(1996)
Appl Environ Microbiol
, vol.62
, Issue.6
, pp. 1935-1943
-
-
Borneman, J.1
Skroch, P.W.2
O'Sullivan, K.M.3
Palus, J.A.4
Rumjanek, N.G.5
Jansen, J.L.6
Nienhuis, J.7
Triplett, E.W.8
-
4
-
-
84898887482
-
Biodegradation of oily wastewater by pure culture of Bacillus cereus
-
Bujang M, Ibrahim NA, Eh Rak A (2013) Biodegradation of oily wastewater by pure culture of Bacillus cereus. ARPN J Agric Biol Sci 8:108–115
-
(2013)
ARPN J Agric Biol Sci
, vol.8
, pp. 108-115
-
-
Bujang, M.1
Ibrahim, N.A.2
Eh Rak, A.3
-
5
-
-
0001463548
-
Nonparametric estimation of the number of classes in a population
-
Chao A (1984) Nonparametric estimation of the number of classes in a population. Scand J Stat 11:265–270
-
(1984)
Scand J Stat
, vol.11
, pp. 265-270
-
-
Chao, A.1
-
6
-
-
0023526239
-
Estimating the population size for capture–recapture data with unequal catchability
-
COI: 1:STN:280:DyaL1c7gsl2qsw%3D%3D, PID: 3427163
-
Chao A (1987) Estimating the population size for capture–recapture data with unequal catchability. Biometrics 43:783–791
-
(1987)
Biometrics
, vol.43
, pp. 783-791
-
-
Chao, A.1
-
7
-
-
1242277878
-
Response of the soil bacterial community to the addition of toluene and toluene-degrading bacterial
-
COI: 1:CAS:528:DC%2BD2cXhtFCjtbY%3D
-
Chao WL, Hsu SF (2004) Response of the soil bacterial community to the addition of toluene and toluene-degrading bacterial. Soil Biol Biochem 36:479–487
-
(2004)
Soil Biol Biochem
, vol.36
, pp. 479-487
-
-
Chao, W.L.1
Hsu, S.F.2
-
8
-
-
84939874214
-
Catechol-2,3-dioxygenase screening in putative hydrocarbon utilizing bacteria
-
Chikere CB, Azubuike CC (2013) Catechol-2,3-dioxygenase screening in putative hydrocarbon utilizing bacteria. Int Res J Microbiol 4:1–6
-
(2013)
Int Res J Microbiol
, vol.4
, pp. 1-6
-
-
Chikere, C.B.1
Azubuike, C.C.2
-
9
-
-
0017913415
-
The effect of toluene on the structure and permeability of the outer and inner membranes of Escherichia coli
-
de Smet MJ, Kingma J, Witholt B (1978) The effect of toluene on the structure and permeability of the outer and inner membranes of Escherichia coli. Biochem Biophys Acta 506:64080
-
(1978)
Biochem Biophys Acta
, vol.506
, pp. 64080
-
-
de Smet, M.J.1
Kingma, J.2
Witholt, B.3
-
10
-
-
77950563986
-
Microbial biodegradation and metabolite toxicity of three pyrimidine-based cation ionic liquids
-
COI: 1:CAS:528:DC%2BC3cXkt1Grt7c%3D
-
Docherty KM, Joyce MV, Kulacki KJ, Kulpa CF (2010) Microbial biodegradation and metabolite toxicity of three pyrimidine-based cation ionic liquids. R Soc Chem 12:701–712
-
(2010)
R Soc Chem
, vol.12
, pp. 701-712
-
-
Docherty, K.M.1
Joyce, M.V.2
Kulacki, K.J.3
Kulpa, C.F.4
-
11
-
-
0036226811
-
Degradation characteristics of toluene, benzene, ethylbenzene and xylene by Stenotrophomonas maltophilia T3-c
-
Ey L, Jun YS, Cho KS, Ryu HW (2002) Degradation characteristics of toluene, benzene, ethylbenzene and xylene by Stenotrophomonas maltophilia T3-c. J Air Manag Assoc 52:400–406
-
(2002)
J Air Manag Assoc
, vol.52
, pp. 400-406
-
-
Ey, L.1
Jun, Y.S.2
Cho, K.S.3
Ryu, H.W.4
-
12
-
-
0031948118
-
Aerobic Degradation of 2,4,6-trinitrotoluene by Enterobacter cloacae PB2 and by pentaerythritol tetranitrate reductase
-
COI: 1:CAS:528:DyaK1cXlsVKhtLs%3D, PID: 9687442
-
French CE, Nicklin S, Bruce NC (1998) Aerobic Degradation of 2,4,6-trinitrotoluene by Enterobacter cloacae PB2 and by pentaerythritol tetranitrate reductase. Appl Environ Microbiol 64(8):2864–2868
-
(1998)
Appl Environ Microbiol
, vol.64
, Issue.8
, pp. 2864-2868
-
-
French, C.E.1
Nicklin, S.2
Bruce, N.C.3
-
13
-
-
63149188089
-
Towards bioremediation of toxic unresolved complex mixtures of hydrocarbons: identification of bacteria capable of rapid degradation of alkyltetralins
-
COI: 1:CAS:528:DC%2BD1MXjslWqs7c%3D
-
Frenzel M, James P, Burton S, Rowland SJ, Lappin-Scott HM (2009) Towards bioremediation of toxic unresolved complex mixtures of hydrocarbons: identification of bacteria capable of rapid degradation of alkyltetralins. J Soils Sediment 9:129–136
-
(2009)
J Soils Sediment
, vol.9
, pp. 129-136
-
-
Frenzel, M.1
James, P.2
Burton, S.3
Rowland, S.J.4
Lappin-Scott, H.M.5
-
14
-
-
0032708727
-
Linking toluene degradation with specific microbial populations in soil
-
COI: 1:CAS:528:DyaK1MXnvVGjtLk%3D, PID: 10583996
-
Hanson JR, Macalady JL, Harris D, Scow KM (1999) Linking toluene degradation with specific microbial populations in soil. Appl Environ Microbiol 65:5403–5408
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 5403-5408
-
-
Hanson, J.R.1
Macalady, J.L.2
Harris, D.3
Scow, K.M.4
-
15
-
-
0037506334
-
Genetics of polycyclic aromatic hydrocarbon metabolism in diverse aerobic bacteria
-
Hiroshi H, Omori T (2003) Genetics of polycyclic aromatic hydrocarbon metabolism in diverse aerobic bacteria. Biosci Biotechnol Biochem 67:225–243
-
(2003)
Biosci Biotechnol Biochem
, vol.67
, pp. 225-243
-
-
Hiroshi, H.1
Omori, T.2
-
16
-
-
1642345404
-
Bacterial succession in a petroleum land treatment unit
-
COI: 1:CAS:528:DC%2BD2cXisVKisLc%3D, PID: 15006804
-
Kaplan CW, Kitts CL (2004) Bacterial succession in a petroleum land treatment unit. Appl Environ Microbiol 70:1777–1786
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 1777-1786
-
-
Kaplan, C.W.1
Kitts, C.L.2
-
17
-
-
0033764354
-
Novel toluene elimination system in a toluene-tolerant microorganism
-
Kobashi H, Uematsu K, Hirayama H, Horikoshi K (2000) Novel toluene elimination system in a toluene-tolerant microorganism. J Bacteriol 182:6451–6455
-
(2000)
J Bacteriol
, vol.182
, pp. 6451-6455
-
-
Kobashi, H.1
Uematsu, K.2
Hirayama, H.3
Horikoshi, K.4
-
18
-
-
83055184882
-
Hydrocarbon-degrading bacteria and bacterial community response in Gulf of Mexico Beach sands impacted by the Deepwater Horizon oil spill
-
COI: 1:CAS:528:DC%2BC3MXhs1GqtrbP, PID: 21948834
-
Kostka JE, Prakash O, Overholt WA, Green SJ, Freyer G, Canion A, Delgardio J, Norton N, Hazen TC, Huettel M (2011) Hydrocarbon-degrading bacteria and bacterial community response in Gulf of Mexico Beach sands impacted by the Deepwater Horizon oil spill. Appl Environ Microbiol 77:7962–7974
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 7962-7974
-
-
Kostka, J.E.1
Prakash, O.2
Overholt, W.A.3
Green, S.J.4
Freyer, G.5
Canion, A.6
Delgardio, J.7
Norton, N.8
Hazen, T.C.9
Huettel, M.10
-
19
-
-
7044256045
-
Microbiology laboratory theory and application, 3rd ed. Morton Publishing Company
-
772
-
Leboffe MJ, Pierce BE (2010) Microbiology laboratory theory and application, 3rd ed. Morton Publishing Company, 772 pp
-
(2010)
-
-
Leboffe, M.J.1
Pierce, B.E.2
-
20
-
-
36348964709
-
Biodegradation of p-nitrophenol and 4-chlorophenol by Stenotrophomonas sp
-
COI: 1:CAS:528:DC%2BD2sXhsVersL7F, PID: 18031334
-
Liu Z, Yang C, Qiao C (2007) Biodegradation of p-nitrophenol and 4-chlorophenol by Stenotrophomonas sp. FEMS Microbiol Lett 277:150–156
-
(2007)
FEMS Microbiol Lett
, vol.277
, pp. 150-156
-
-
Liu, Z.1
Yang, C.2
Qiao, C.3
-
22
-
-
0033981078
-
Development of Catechol-2,3-dioxygenase-specific primers for monitoring bioremediation by competitive quantitative PCR
-
COI: 1:CAS:528:DC%2BD3cXhtFeqsrY%3D, PID: 10653735
-
Mesarch MB, Nakatsu CH, Nies L (2000) Development of Catechol-2,3-dioxygenase-specific primers for monitoring bioremediation by competitive quantitative PCR. Appl Environ Microbiol 66:678–683
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 678-683
-
-
Mesarch, M.B.1
Nakatsu, C.H.2
Nies, L.3
-
23
-
-
0020645043
-
New M13 vectors for cloning
-
COI: 1:CAS:528:DyaL2cXhvVCqtQ%3D%3D, PID: 6310323
-
Messing J (1983) New M13 vectors for cloning. Methods Enzymol 101:20–79
-
(1983)
Methods Enzymol
, vol.101
, pp. 20-79
-
-
Messing, J.1
-
24
-
-
0015963603
-
Role of catechol and methylcatechol as inducers of aromatic metabolism in Pseudomonas putida
-
COI: 1:CAS:528:DyaE2cXhtFyjtrw%3D, PID: 4813893
-
Murray K, Williams PA (1974) Role of catechol and methylcatechol as inducers of aromatic metabolism in Pseudomonas putida. J Bacteriol 117:1153–1157
-
(1974)
J Bacteriol
, vol.117
, pp. 1153-1157
-
-
Murray, K.1
Williams, P.A.2
-
25
-
-
0033926905
-
Toxic effects of toluene on the growth of activated sludge bacteria
-
COI: 1:CAS:528:DC%2BD3cXlvVykur4%3D
-
Nahar N, Alauddin M, Quilty B (2000) Toxic effects of toluene on the growth of activated sludge bacteria. World J Microbiol Biotechnol 16:307–311
-
(2000)
World J Microbiol Biotechnol
, vol.16
, pp. 307-311
-
-
Nahar, N.1
Alauddin, M.2
Quilty, B.3
-
26
-
-
0031451752
-
Construction of a bacterial consortium for the biofilteration of benzene, toluene and xylene emissions
-
COI: 1:CAS:528:DyaK1cXmt1Kk
-
Oh Y-S, Bartha R (1997) Construction of a bacterial consortium for the biofilteration of benzene, toluene and xylene emissions. World J Microbiol Biotechnol 13:627–632
-
(1997)
World J Microbiol Biotechnol
, vol.13
, pp. 627-632
-
-
Oh, Y.-S.1
Bartha, R.2
-
27
-
-
84939889732
-
Molecular characterization of bacterial phylogenetic and functional groups at the site of the Deepwater Horizon Oil Spill along the Gulf of Mexico
-
Olapade OA (2013) Molecular characterization of bacterial phylogenetic and functional groups at the site of the Deepwater Horizon Oil Spill along the Gulf of Mexico. J Pet Environ Biotechnol 4:144. doi:10.4172/2157-7463.1000144
-
(2013)
J Pet Environ Biotechnol
, vol.4
, pp. 144
-
-
Olapade, O.A.1
-
28
-
-
84939897239
-
Occurrence, ubiquity and proficiency of hydrocarbon-degrading microbial assemblages in nature
-
Olapade OA (2013) Occurrence, ubiquity and proficiency of hydrocarbon-degrading microbial assemblages in nature. J Pollut Effect Control 1:e106. doi:10.4172/jpe.1000e106
-
(2013)
J Pollut Effect Control
, vol.1
, pp. e106
-
-
Olapade, O.A.1
-
29
-
-
0242370738
-
The effect of toluene on the microbial community of a river in Northeastern Ohio, USA
-
Olapade OA, Leff LG (2004) The effect of toluene on the microbial community of a river in Northeastern Ohio, USA. J Freshw Ecol 18(3):465–477
-
(2004)
J Freshw Ecol
, vol.18
, Issue.3
, pp. 465-477
-
-
Olapade, O.A.1
Leff, L.G.2
-
30
-
-
0029853148
-
WWW-query: an on-line retrieval system for biological sequence banks
-
COI: 1:CAS:528:DyaK28XmvVCmuro%3D, PID: 8905155
-
Perriere G, Gouy M (1996) WWW-query: an on-line retrieval system for biological sequence banks. Biochimie 78:364–369
-
(1996)
Biochimie
, vol.78
, pp. 364-369
-
-
Perriere, G.1
Gouy, M.2
-
31
-
-
33750937534
-
Bacterial diversity in the active stage of a remediation system for mineral oil hydrocarbon-contaminated soils
-
COI: 1:CAS:528:DC%2BD28Xht1GntrrM, PID: 17074900
-
Popp N, Schlöman M, Mau M (2006) Bacterial diversity in the active stage of a remediation system for mineral oil hydrocarbon-contaminated soils. Microbiology 152:3291–3304
-
(2006)
Microbiology
, vol.152
, pp. 3291-3304
-
-
Popp, N.1
Schlöman, M.2
Mau, M.3
-
32
-
-
0011381911
-
Fingerprinting petroleum products: unleaded gasolines
-
Kostecki PT, Calabrese EJ, (eds), 2, Lewis Publishers, Chelsea:
-
Potter TL (1992) Fingerprinting petroleum products: unleaded gasolines. In: Kostecki PT, Calabrese EJ (eds) Petroleum contaminated soils, vol 2. Lewis Publishers, Chelsea, pp 88–92
-
(1992)
Petroleum contaminated soils
, pp. 88-92
-
-
Potter, T.L.1
-
34
-
-
33750078701
-
Introducing SONS, a tool for operational taxonomic unit-based comparison of microbial community memberships and structures
-
COI: 1:CAS:528:DC%2BD28XhtFalsLnO, PID: 17021230
-
Schloss PD, Handelsman J (2006) Introducing SONS, a tool for operational taxonomic unit-based comparison of microbial community memberships and structures. Appl Environ Microbiol 72:6773–6779
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 6773-6779
-
-
Schloss, P.D.1
Handelsman, J.2
-
35
-
-
4143088428
-
Biodegradation of chlorpyrifos by Enterobacter strain B-14 and its use in bioremediation of contaminated soils
-
COI: 1:CAS:528:DC%2BD2cXms1eksr0%3D, PID: 15294824
-
Singh BJ, Walker A, Morgan JAW, Wright DJ (2004) Biodegradation of chlorpyrifos by Enterobacter strain B-14 and its use in bioremediation of contaminated soils. Appl Environ Microbiol 70(8):4855–4863
-
(2004)
Appl Environ Microbiol
, vol.70
, Issue.8
, pp. 4855-4863
-
-
Singh, B.J.1
Walker, A.2
Morgan, J.A.W.3
Wright, D.J.4
-
36
-
-
0025528594
-
The biogedradation of aromatic hydrocarbons by bacteria
-
COI: 1:CAS:528:DyaK3MXkt1Gmurk%3D, PID: 1368147
-
Smith MR (1990) The biogedradation of aromatic hydrocarbons by bacteria. Biodegradation 1:191–206
-
(1990)
Biodegradation
, vol.1
, pp. 191-206
-
-
Smith, M.R.1
-
37
-
-
37149023762
-
Detection of meta- and ortho-cleavage dioxygenases in bacterial phenol-degraders
-
Sahar S (2006) Detection of meta- and ortho-cleavage dioxygenases in bacterial phenol-degraders. J Appl Environ Microbiol Manag 10:75–81
-
(2006)
J Appl Environ Microbiol Manag
, vol.10
, pp. 75-81
-
-
Sahar, S.1
-
38
-
-
0031833975
-
Two new Mycobacterium strains and their role in toluene degradation in a contaminated stream
-
COI: 1:CAS:528:DyaK1cXislWlsrg%3D, PID: 9572941
-
Tay ST-L, Hemond HF, Polz MF, Canavaugh CM, Dejesus I, Krumholz LR (1998) Two new Mycobacterium strains and their role in toluene degradation in a contaminated stream. Appl Environ Microbiol 64:1715–1720
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 1715-1720
-
-
Tay, S.T.-L.1
Hemond, H.F.2
Polz, M.F.3
Canavaugh, C.M.4
Dejesus, I.5
Krumholz, L.R.6
-
39
-
-
0033021523
-
Importance of Xanthobacter autotrophicus in toluene biodegradation within a contaminated stream
-
COI: 1:CAS:528:DyaK1MXhvV2rsrw%3D, PID: 10188284
-
Tay ST-L, Hemond HF, Polz MF, Canavaugh CM, Krumholz LR (1999) Importance of Xanthobacter autotrophicus in toluene biodegradation within a contaminated stream. Syst Appl Microbiol 22:113–118
-
(1999)
Syst Appl Microbiol
, vol.22
, pp. 113-118
-
-
Tay, S.T.-L.1
Hemond, H.F.2
Polz, M.F.3
Canavaugh, C.M.4
Krumholz, L.R.5
-
40
-
-
0004180588
-
-
CRC Press, New York:
-
van Elsas JD, Jansson JK, Trevors JK (2007) Modern soil microbiology, 2nd edn. CRC Press, New York, pp 387–429
-
(2007)
Modern soil microbiology
, pp. 387-429
-
-
van Elsas, J.D.1
Jansson, J.K.2
Trevors, J.K.3
-
42
-
-
80052335632
-
Hydrocarbon degradation, plant colonization and gene expression of alkane degradation genes by endophytic Enterobacter ludwigii strains
-
COI: 1:CAS:528:DC%2BC3MXhtFehtLzM, PID: 21700373
-
Yousaf S, Afzal M, Reichenauer TG, Brady CL, Sessitsch A (2011) Hydrocarbon degradation, plant colonization and gene expression of alkane degradation genes by endophytic Enterobacter ludwigii strains. Environ Pollut 159(10):2675–2683. doi:10.1016/j.envpol.2011.05.031. Epub 2011 Jun 23
-
(2011)
Environ Pollut
, vol.159
, Issue.10
, pp. 2675-2683
-
-
Yousaf, S.1
Afzal, M.2
Reichenauer, T.G.3
Brady, C.L.4
Sessitsch, A.5
-
43
-
-
3843123142
-
Isolation and characterization of novel bacteria degrading polycyclic aromatic hydrocarbons from polluted Greek soils
-
COI: 1:CAS:528:DC%2BD2cXkvF2murc%3D
-
Zhang H, Kallimanis A, Koukkou AI, Drainas C (2004) Isolation and characterization of novel bacteria degrading polycyclic aromatic hydrocarbons from polluted Greek soils. Environ Biotechnol 65:124–131
-
(2004)
Environ Biotechnol
, vol.65
, pp. 124-131
-
-
Zhang, H.1
Kallimanis, A.2
Koukkou, A.I.3
Drainas, C.4
-
44
-
-
84857155960
-
Isolation and characterization of catechol-2,3-dioxygenase genes from phenanthrene degraders Sphingomonas, sp. ZP1 and Pseudomonas sp. ZP2
-
Zhao HP, Liang SH, Yang X (2011) Isolation and characterization of catechol-2,3-dioxygenase genes from phenanthrene degraders Sphingomonas, sp. ZP1 and Pseudomonas sp. ZP2. Environ Technol 32:1895–1901
-
(2011)
Environ Technol
, vol.32
, pp. 1895-1901
-
-
Zhao, H.P.1
Liang, S.H.2
Yang, X.3
|