Biological soft X-ray tomography on beamline 2.1 at the Advanced Light Source

Journal of Synchrotron Radiation

Volumn 21, Issue 6, 2014, Pages 1370-1377

  Le Gros, Mark A ^a,b,c   Mcdermott, Gerry ^a,b   Cinquin, Bertrand P ^a,b   Smith, Elizabeth A ^a,b   Do, Myan ^a,b   Chao, Weilun L ^c   Naulleau, Patrick P ^c   Larabell, Carolyn A ^a,b,c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^c LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

cell biology; cellular imaging; cryo preservation; cryogenic fluorescence tomography; cryostage; three dimensional reconstruction

Indexed keywords

CRYOGENICS; CYTOLOGY; IMAGING SYSTEMS; LIGHT; LIGHT SOURCES; MAMMALS; MOLECULAR BIOLOGY; OPTICAL TOMOGRAPHY; TOMOGRAPHY; X RAY MICROSCOPES;

CELL BIOLOGY; CELLULAR IMAGING; CRYO-PRESERVATION; CRYOSTAGE; FLUORESCENCE TOMOGRAPHY; THREE-DIMENSIONAL RECONSTRUCTION;

DATA ACQUISITION;

ANIMAL; CELL CULTURE; COMPUTER ASSISTED TOMOGRAPHY; CRYOPRESERVATION; CYTOLOGY; DEVICES; EQUIPMENT DESIGN; FLUORESCENCE MICROSCOPY; LIGHT; PROCEDURES; SPECIMEN HANDLING; THREE DIMENSIONAL IMAGING;

ANIMALS; CELL BIOLOGY; CELLS, CULTURED; CRYOPRESERVATION; EQUIPMENT DESIGN; IMAGING, THREE-DIMENSIONAL; LIGHT; MICROSCOPY, FLUORESCENCE; SPECIMEN HANDLING; TOMOGRAPHY, X-RAY COMPUTED;

EID: 84939261359     PISSN: 09090495     EISSN: 16005775     Source Type: Journal    
DOI: 10.1107/S1600577514015033     Document Type: Article

References (28)

1. Attwood, D. T. (1999). Soft X-rays and Extreme Ultraviolet Radiation: Principles and Applications. Cambridge University Press.
2. Cardone, G., Grünewald, K., & Steven, A. C. (2005). J. Struct. Biol. 151, 117-129.
3. Chao, W., Fischer, P., Tyliszczak, T., Rekawa, S., Anderson, E., & Naulleau, P. (2012). Opt. Express, 20, 9777-9783.
4. Cinquin, B. P., Do, M., McDermott, G., Walters, A. D., Myllys, M., Smith, E. A., Cohen-Fix, O., Le Gros, M. A., & Larabell, C. A. (2014). J. Cell. Biochem. 115, 209-216.
5. Clowney, E. J., LeGros, M. A., Mosley, C. P., Clowney, F. G., Markenskoff-Papadimitriou, E. C., Myllys, M., Barnea, G., Larabell, C. A., & Lomvardas, S. (2012). Cell, 151, 724-737.
6. Falcone, R., Jacobsen, C., Kirz, J., Marchesini, S., Shapiro, D., & Spence, J. (2011). Contemp. Phys. 52, 293-318.
7. Funsten, H. O., Ritzau, S. M., Harper, R. W., & Korde, R. (2004). Appl. Phys. Lett. 84, 3552.
8. Hagen, C., Guttmann, P., Klupp, B., Werner, S., Rehbein, S., Mettenleiter, T. C., Schneider, G., & Grünewald, K. (2012). J. Struct. Biol. 177, 193-201.
9. Hirai, A., Takemoto, K., Nishino, K., Niemann, B., Hettwer, M., Rudolph, D., Anderson, E., Attwood, D., Kern, D. P., Nakayama, Y., & Kihara, H. (1999). Jpn. J. Appl. Phys. 38, 274-278.
10. Hummel, E., Guttmann, P., Werner, S., Tarek, B., Schneider, G., Kunz, M., Frangakis, A. S., & Westermann, B. (2012). PLoS One, 7, e53293.
11. Kirz, J., Jacobsen, C., & Howells, M. (1995). Q. Rev. Biophys. 28, 33-130.
12. Larabell, C. A., & Le Gros, M. A. (2004). Mol. Biol. Cell, 15, 957-962.
13. Larabell, C. A., & Nugent, K. A. (2010). Curr. Opin. Struct. Biol. 20, 623-631.
14. Le Gros, M. A., McDermott, G., & Larabell, C. A. (2005). Curr. Opin. Struct. Biol. 15, 593-600.
15. Le Gros, M. A., McDermott, G., Uchida, M., Knoechel, C. G., & Larabell, C. A. (2009). J. Microsc. 235, 1-8.
16. McDermott, G., Le Gros, M. A., Knoechel, C. G., Uchida, M., & Larabell, C. A. (2009). Trends Cell Biol. 19, 587-595.
17. McDermott, G., Le Gros, M. A., & Larabell, C. A. (2012). Annu. Rev. Phys. Chem. 63, 225-239.
18. Parkinson, D. Y., Epperly, L. R., McDermott, G., Le Gros, M. A., Boudreau, R. M., & Larabell, C. A. (2013). Methods Mol. Biol. 950, 457-481.
19. Parkinson, D. Y., Knoechel, C., Yang, C., Larabell, C. A., & Le Gros, M. A. (2012). J. Struct. Biol. 177, 259-266.
20. Rehbein, S., Guttmann, P., Werner, S., & Schneider, G. (2012). Opt. Express, 20, 5830-5839.
21. Sakdinawat, A., & Attwood, D. (2010). Nat. Photon. 4, 840-848.
22. Schneider, G., Guttmann, P., Heim, S., Rehbein, S., Mueller, F., Nagashima, K., Heymann, J. B., Müller, W. G., & McNally, J. G. (2010). Nat. Methods, 7, 985-987.
23. Schneider, G., Guttmann, P., Rehbein, S., Werner, S., & Follath, R. (2012). J. Struct. Biol. 177, 212-223.
24. Smith, E. A., Cinquin, B. P., McDermott, G., Le Gros, M. A., Parkinson, D. Y., Kim, H. T., & Larabell, C. A. (2013). J. Struct. Biol. 184, 12-20.
25. Uchida, M., McDermott, G., Wetzler, M., Le Gros, M. A., Myllys, M., Knoechel, C., Barron, A. E., & Larabell, C. A. (2009). Proc. Natl Acad. Sci. USA, 106, 19375-19380.
26. Vila-Comamala, J., Jefimovs, K., Raabe, J., Pilvi, T., Fink, R. H., Senoner, M., Maassdorf, A., Ritala, M., & David, C. (2009). Ultramicroscopy, 109, 1360-1364.
27. Weiss, D., Schneider, G., Niemann, B., Guttmann, P., Rudolph, D., & Schmahl, G. (2000). Ultramicroscopy, 84, 185-197.
28. Weiss, D., Schneider, G., Vogt, S., Guttmann, P., Niemann, B., Rudolph, D., & Schmahl, G. (2001). Nucl. Instrum. Methods Phys. Res. A, 467, 1308-1311.