Time-resolved photodetachment anisotropy: Gas-phase rotational and vibrational dynamics of the fluorescein anion

Journal of Physical Chemistry Letters

Volumn 6, Issue 1, 2015, Pages 189-194

  Horke, Daniel A ^a   Chatterley, Adam S ^b   Bull, James N ^c   Verlet, Jan R R ^c  

^a DESY   (Germany)

^b Ultrafast X ray Science Laboratory   (United States)

^c DURHAM UNIVERSITY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANISOTROPY; BIOMOLECULES; CHROMOPHORES; DYNAMICS; GASES; IONIZATION OF GASES; OPTICAL PUMPING; PHOTOELECTRONS; PHOTONS; PROBES;

DYNAMICAL PROCESS; LARGE BIOMOLECULES; PHOTO-DETACHMENT; PHOTOELECTRON SIGNALS; ROTATIONAL DYNAMICS; TIME RESOLVED FLUORESCENCE ANISOTROPY; VIBRATIONAL DYNAMICS; VIBRATIONAL WAVEPACKET DYNAMICS;

NEGATIVE IONS;

EID: 84939184909     PISSN: None     EISSN: 19487185     Source Type: Journal    
DOI: 10.1021/jz5022526     Document Type: Article

References (49)

1. Royer, C. A. Probing Protein Folding and Conformational Transitions with Fluorescence. Chem. Rev. 2006, 106, 1769-1784.
2. Rao, J.; Dragulescu-Andrasi, A.; Yao, H.; Yao, H. Fluorescence Imaging in Vivo: Recent Advances. Curr. Opin. Biotechnol. 2007, 18, 17-25.
3. Jameson, D. M.; Ross, J. A. Fluorescence Polarization/Anisotropy in Diagnostics and Imaging. Chem. Rev. 2010, 110, 2685-2708.
4. Stapelfeldt, H.; Seideman, T. Colloquium: Aligning Molecules with Strong Laser Pulses. Rev. Mod. Phys. 2003, 75, 543-557.
5. Bisgaard, C. Z.; Clarkin, O. J.; Wu, G. R.; Lee, A. M. D.; Gessner, O.; Hayden, C. C.; Stolow, A. Time-Resolved Molecular Frame Dynamics of Fixed-in-Space Cs2Molecules. Science 2009, 323, 1464-1468.
6. Brouard, M.; Parker, D. H.; Van De Meerakker, S. Y. T. Taming Molecular Collisions Using Electric and Magnetic Fields. Chem. Soc. Rev. 2014, 43, 7279-7294.
7. Nagy, A. M.; Talbot, F. O.; Czar, M. F.; Jockusch, R. A. Fluorescence Lifetimes of Rhodamine Dyes in Vacuo. J. Photochem. Photobiol., A 2012, 244, 47-53.
8. Iavarone, A. T.; Parks, J. H. Conformational Change in Unsolvated Trp-Cage Protein Probed by Fluorescence. J. Am. Chem. Soc. 2005, 127, 8606-8607.
9. Nathanson, G. M.; McClelland, G. M. Fluorescence Polarization as a Probe of the Rotational-Dynamics of Isolated Highly Excited Molecules. J. Chem. Phys. 1984, 81, 629-642.
10. Felker, P. M.; Baskin, J. S.; Zewail, A. H. Rephasing of Collisionless Molecular Rotational Coherence in Large Molecules. J. Phys. Chem. 1986, 90, 724-728.
11. Felker, P. M.; Zewail, A. H. Purely Rotational Coherence Effect and Time-Resolved Sub-Doppler Spectroscopy of Large Molecules 0.1. Theoretical. J. Chem. Phys. 1987, 86, 2460-2482.
12. Khoury, J. T.; Rodriguez-Cruz, S. E.; Parks, J. H. Pulsed Fluorescence Measurements of Trapped Molecular Ions with Zero Background Detection. J. Am. Soc. Mass. Spectrom. 2002, 13, 696-708.
13. Shi, X.; Parks, J. H. Fluorescence Lifetime Probe of Biomolecular Conformations. J. Am. Soc. Mass. Spectrom. 2010, 21, 707-718.
14. Iavarone, A. T.; Duft, D.; Parks, J. H. Shedding Light on Biomolecule Conformational Dynamics Using Fluorescence Measurements of Trapped Ions. J. Phys. Chem. A 2006, 110, 12714-12727.
15. Danell, A. S.; Parks, J. H. Fret Measurements of Trapped Oligonucleotide Duplexes. Int. J. Mass Spectrom. 2003, 229, 35-45.
16. Dashtiev, M.; Azov, V.; Frankevich, V.; Scharfenberg, L.; Zenobi, R. Clear Evidence of Fluorescence Resonance Energy Transfer in Gas-Phase Ions. J. Am. Soc. Mass. Spectrom. 2005, 16, 1481-1487.
17. Iavarone, A. T.; Patriksson, A.; Van Der Spoel, D.; Parks, J. H. Fluorescence Probe of Trp-Cage Protein Conformation in Solution and in Gas Phase. J. Am. Chem. Soc. 2007, 129, 6726-6735.
18. Talbot, F. O.; Rullo, A.; Yao, H.; Jockusch, R. A. Fluorescence Resonance Energy Transfer in Gaseous, Mass-Selected Polyproline Peptides. J. Am. Chem. Soc. 2010, 132, 16156-16164.
19. Daly, S.; Poussigue, F.; Simon, A.-L.; MacAleese, L.; Bertorelle, F.; Chirot, F.; Antoine, R.; Dugourd, P. Action-Fret: Probing the Molecular Conformation of Mass-Selected Gas-Phase Peptides with Forster Resonance Energy Transfer Detected by Acceptor-Specific Fragmentation. Anal. Chem. 2014, 86, 8798-8804.
20. Frankevich, V.; Chagovets, V.; Widjaja, F.; Barylyuk, K.; Yang, Z.; Zenobi, R. Fluorescence Resonance Energy Transfer of Gas-Phase Ions under Ultra High Vacuum and Ambient Conditions. Phys. Chem. Chem. Phys. 2014, 16, 8911-8920.
21. Stolow, A.; Bragg, A. E.; Neumark, D. M. Femtosecond Time-Resolved Photoelectron Spectroscopy. Chem. Rev. 2004, 104, 1719-1757.
22. Suzuki, T. Femtosecond Time-Resolved Photoelectron Imaging. Annu. Rev. Phys. Chem. 2006, 57, 555-592.
23. Verlet, J. R. R. Femtosecond Spectroscopy of Cluster Anions: Insights into Condensed-Phase Phenomena from the Gas-Phase. Chem. Soc. Rev. 2008, 37, 505-517.
24. Yao, H.; Steill, J. D.; Oomens, J.; Jockusch, R. A. Infrared Multiple Photon Dissociation Action Spectroscopy and Computational Studies of Mass-Selected Gas-Phase Fluorescein and 2', 7'-Dichlorofluorescein Ions. J. Phys. Chem. A 2011, 115, 9739-9747.
25. McQueen, P. D.; Sagoo, S.; Yao, H.; Jockusch, R. A. On the Intrinsic Photophysics of Fluorescein. Angew. Chem., Int. Ed. 2010, 49, 9193-9196.
26. Yao, H.; Jockusch, R. A. Fluorescence and Electronic Action Spectroscopy of Mass-Selected Gas-Phase Fluorescein, 2', 7'-Dichlorofluorescein, and 2', 7'-Difluorofluorescein Ions. J. Phys. Chem. A 2013, 117, 1351-1359.
27. Lecointre, J.; Roberts, G. M.; Horke, D. A.; Verlet, J. R. R. Ultrafast Relaxation Dynamics Observed through Time-Resolved Photoelectron Angular Distributions. J. Phys. Chem. A 2010, 114, 11216-11224.
28. Horke, D. A.; Verlet, J. R. R. Time-Resolved Photoelectron Imaging of the Chloranil Radical Anion: Ultrafast Relaxation of Electronically Excited Electron Acceptor States. Phys. Chem. Chem. Phys. 2011, 13, 19546-19552.
29. Horke, D. A.; Roberts, G. M.; Lecointre, J.; Verlet, J. R. R. Velocity-Map Imaging at Low Extraction Fields. Rev. Sci. Instrum. 2012, 83.
30. Chai, J.-D.; Head-Gordon, M. Long-Range Corrected Hybrid Density Functionals with Damped Atom-Atom Dispersion Corrections. Phys. Chem. Chem. Phys. 2008, 10, 6615-6620.
31. Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Scalmani, G.; Barone, V.; Mennucci, B.; Petersson, G. A.; Nakatsuji, H.; Caricato, M.; Li, X.; Hratchian, H. P.; Izmaylov, A. F.; Bloino, J.; Zheng, G.; Sonnenberg, J. L.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Vreven, T.; Montgomery, J. A., Jr.; Peralta, J. E.; Ogliaro, F.; Bearpark, M.; Heyd, J. J.; Brothers, E.; Kudin, K. N.; Staroverov, V. N.; Kobayashi, R.; Normand, J.; Raghavachari, K.; Rendell, A.; Burant, J. C.; Iyengar, S. S.; Tomasi, J.; Cossi, M.; Rega, N.; Millam, M. J.; Klene, M.; Knox, J. E.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Martin, R. L.; Morokuma, K.; Zakrzewski, V. G.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Dapprich, S.; Daniels, A. D.; Farkas, O.; Foresman, J. B.; Ortiz, J. V.; Cioslowski, J.; Fox, D. J. Gaussian 09, revision A.01; Gaussian, Inc.: Wallingford, CT, 2009.
32. Hehre, W. J.; Ditchfie, R.; Pople, J. A. Self-Consistent Molecular-Orbital Methods 0.12. Further Extensions of Gaussian-Type Basis Sets for Use in Molecular-Orbital Studies of Organic-Molecules. J. Chem. Phys. 1972, 56, 2257-2261.
33. Yanai, T.; Tew, D. P.; Handy, N. C. A New Hybrid Exchange-Correlation Functional Using the Coulomb-Attenuating Method (Cam-B3lyp). Chem. Phys. Lett. 2004, 393, 51-57.
34. Cohen, A. J.; Mori-Sanchez, P.; Yang, W. Insights into Current Limitations of Density Functional Theory. Science 2008, 321, 792-794.
35. Jensen, F. Describing Anions by Density Functional Theory: Fractional Electron Affinity. J. Chem. Theory Comput. 2010, 6, 2726-2735.
36. Horke, D. A.; Li, Q.; Blancafort, L.; Verlet, J. R. R. Ultrafast above-Threshold Dynamics of the Radical Anion of a Prototypical Quinone Electron-Acceptor. Nat. Chem. 2013, 5, 711-717.
37. Blokhin, A. P.; Gelin, M. F.; Khoroshilov, E. V.; Kryukov, I. V.; Sharkov, A. V. Dynamics of Optically Induced Anisotropy in an Ensemble of Asymmetric Top Molecules in the Gas Phase. Opt. Spectrosc. 2003, 95, 346-352.
38. Horke, D. A.; Chatterley, A. S.; Verlet, J. R. R. Femtosecond Photoelectron Imaging of Aligned Polyanions: Probing Molecular Dynamics through the Electron-Anion Coulomb Repulsion. J. Phys. Chem. Lett. 2012, 3, 834-838.
39. Verlet, J. R. R.; Horke, D. A.; Chatterley, A. S. Excited States of Multiply-Charged Anions Probed by Photoelectron Imaging: Riding the Repulsive Coulomb Barrier. Phys. Chem. Chem. Phys. 2014, 16, 15043-15052.
40. Assion, A.; Geisler, M.; Helbing, J.; Seyfried, V.; Baumert, T. Femtosecond Pump-Probe Photoelectron Spectroscopy: Mapping of Vibrational Wave-Packet Motion. Phys. Rev. A 1996, 54, R4605-R4608.
41. Kojima, H.; Urano, Y.; Kikuchi, K.; Higuchi, T.; Hirata, Y.; Nagano, T. Fluorescent Indicators for Imaging Nitric Oxide Production. Angew. Chem., Int. Ed. 1999, 38, 3209-3212.
42. Miura, T.; Urano, Y.; Tanaka, K.; Nagano, T.; Ohkubo, K.; Fukuzumi, S. Rational Design Principle for Modulating Fluorescence Properties of Fluorescein-Based Probes by Photoinduced Electron Transfer. J. Am. Chem. Soc. 2003, 125, 8666-8671.
43. Zhou, P. W.; Liu, J. Y.; Yang, S. Q.; Chen, J. S.; Han, K. L.; He, G. Z. The Invalidity of the Photo-Induced Electron Transfer Mechanism for Fluorescein Derivatives. Phys. Chem. Chem. Phys. 2012, 14, 15191-15198.
44. Raffael, K.; Blanchet, V.; Chatel, B.; Turri, G.; Girard, B.; Garcia, I. A.; Wilkinson, I.; Whitaker, B. J. Time-Dependent Photoionization of Azulene: Optically Induced Anisotropy on the Femtosecond Scale. Chem. Phys. Lett.. 2008, 460, 59-63.
45. Schalk, O.; Hockett, P. Rotational Dephasing of Symmetric Top Molecules: Analytic Expressions and Applications. Chem. Phys. Lett. 2011, 517, 237-241.
46. Chatterley, A. S.; West, C. W.; Roberts, G. M.; Stavros, V. G.; Verlet, J. R. R. Mapping the Ultrafast Dynamics of Adenine onto Its Nucleotide and Oligonucleotides by Time-Resolved Photoelectron Imaging. J. Phys. Chem. Lett. 2014, 5, 843-848.
47. Chatterley, A. S.; West, C. W.; Stavros, V. G.; Verlet, J. R. R. Time-Resolved Photoelectron Imaging of the Isolated Deprotonated Nucleotides. Chem. Sci. 2014, 5, 3963-3975.
48. Kanu, A. B.; Dwivedi, P.; Tam, M.; Matz, L.; Hill, H. H., Jr. Ion Mobility-Mass Spectrometry. J. Mass Spectrom. 2008, 43, 1-22.
49. Uetrecht, C.; Rose, R. J.; Van Duijn, E.; Lorenzen, K.; Heck, A. J. R. Ion Mobility Mass Spectrometry of Proteins and Protein Assemblies. Chem. Soc. Rev. 2010, 39, 1633-1655.