메뉴 건너뛰기




Volumn 5, Issue 8, 2015, Pages 1657-1662

A search for parent-of-origin effects on honey bee gene expression

Author keywords

Gene expression; Genomics; Honey bees; Imprinting; Kinship theory; Social insects

Indexed keywords

NUCLEOTIDE; OXIDOREDUCTASE; TRANSCRIPTOME;

EID: 84938882420     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.115.017814     Document Type: Article
Times cited : (40)

References (48)
  • 1
    • 70349313621 scopus 로고    scopus 로고
    • Honey bee aggression supports a link between gene regulation and behavioral evolution
    • Alaux, C., S. Sinha, L. Hasadsri, G. J. Hunt, E. Guzman-Novoa et al., 2009 Honey bee aggression supports a link between gene regulation and behavioral evolution. Proc. Natl. Acad. Sci. USA 106: 15400-15405.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 15400-15405
    • Alaux, C.1    Sinha, S.2    Hasadsri, L.3    Hunt, G.J.4    Guzman-Novoa, E.5
  • 2
    • 0036790591 scopus 로고    scopus 로고
    • The Drosophila BRM complex facilitates global transcription by RNA polymerase II
    • Armstrong, J. A., O. Papoulas, G. Daubresse, A. S. Sperling, J. T. Lis et al., 2002 The Drosophila BRM complex facilitates global transcription by RNA polymerase II. EMBO J. 21: 5245-5254.
    • (2002) EMBO J. , vol.21 , pp. 5245-5254
    • Armstrong, J.A.1    Papoulas, O.2    Daubresse, G.3    Sperling, A.S.4    Lis, J.T.5
  • 3
    • 56349112904 scopus 로고    scopus 로고
    • Global survey of genomic imprinting by transcriptome sequencing
    • Babak, T., B. DeVeale, C. Armour, C. Raymond, M. A. Cleary et al., 2008 Global survey of genomic imprinting by transcriptome sequencing. Curr. Biol. 18: 1735-1741.
    • (2008) Curr. Biol. , vol.18 , pp. 1735-1741
    • Babak, T.1    DeVeale, B.2    Armour, C.3    Raymond, C.4    Cleary, M.A.5
  • 4
    • 29144517405 scopus 로고    scopus 로고
    • Bifocal and PP1 interaction regulates targeting of the R-cell growth cone in Drosophila
    • Babu, K., S. Bahri, L. Alphey, and W. Chia, 2005 Bifocal and PP1 interaction regulates targeting of the R-cell growth cone in Drosophila. Dev. Biol. 288: 372-386.
    • (2005) Dev. Biol. , vol.288 , pp. 372-386
    • Babu, K.1    Bahri, S.2    Alphey, L.3    Chia, W.4
  • 5
    • 34547657301 scopus 로고    scopus 로고
    • Analysis of nuclear copies of mitochondrial sequences in honeybee (Apis mellifera) genome
    • Behura, S. K., 2007 Analysis of nuclear copies of mitochondrial sequences in honeybee (Apis mellifera) genome. Mol. Biol. Evol. 24: 1492-1505.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1492-1505
    • Behura, S.K.1
  • 6
    • 84867397446 scopus 로고    scopus 로고
    • Genome-wide and caste-specific DNA methylomes of the ants Camponotus floridanus and Harpegnathos saltator
    • Bonasio, R., Q. Li, J. Lian, N. S. Mutti, L. Jin et al., 2012 Genome-wide and caste-specific DNA methylomes of the ants Camponotus floridanus and Harpegnathos saltator. Curr. Biol. 22: 1755-1764.
    • (2012) Curr. Biol. , vol.22 , pp. 1755-1764
    • Bonasio, R.1    Li, Q.2    Lian, J.3    Mutti, N.S.4    Jin, L.5
  • 7
    • 0038005018 scopus 로고    scopus 로고
    • DAVID: database for annotation, visualization, and integrated discovery
    • Dennis, G. J., B. T. Sherman, D. A. Hosack, J. Yang, W. Gao et al., 2003 DAVID: database for annotation, visualization, and integrated discovery. Genome Biol. 4: 3.
    • (2003) Genome Biol. , vol.4 , pp. 3
    • Dennis, G.J.1    Sherman, B.T.2    Hosack, D.A.3    Yang, J.4    Gao, W.5
  • 8
    • 84859256941 scopus 로고    scopus 로고
    • Critical evaluation of imprinted gene expression by RNA-Seq: a new perspective
    • DeVeale, B., D. van der Kooy, and T. Babak, 2012 Critical evaluation of imprinted gene expression by RNA-Seq: a new perspective. PLoS Genet. 8: e1002600.
    • (2012) PLoS Genet. , vol.8 , pp. e1002600
    • DeVeale, B.1    van der Kooy, D.2    Babak, T.3
  • 9
    • 84987741078 scopus 로고    scopus 로고
    • Intragenomic conflict over queen determination favours genomic imprinting in eusocial Hymenoptera
    • Dobata, S., and K. Tsuji, 2012 Intragenomic conflict over queen determination favours genomic imprinting in eusocial Hymenoptera. Proc. Biol. Sci. 279: 2553-2560.
    • (2012) Proc. Biol. Sci. , vol.279 , pp. 2553-2560
    • Dobata, S.1    Tsuji, K.2
  • 10
    • 84903212480 scopus 로고    scopus 로고
    • The dynamic DNA methylation cycle from egg to sperm in the honey bee Apis mellifera
    • Drewell, R. A., E. C. Bush, E. J. Remnant, G. T. Wong, S. M. Beeler et al., 2014 The dynamic DNA methylation cycle from egg to sperm in the honey bee Apis mellifera. Development 141: 2702-2711.
    • (2014) Development , vol.141 , pp. 2702-2711
    • Drewell, R.A.1    Bush, E.C.2    Remnant, E.J.3    Wong, G.T.4    Beeler, S.M.5
  • 11
    • 67650488920 scopus 로고    scopus 로고
    • DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera
    • Elango, N., B. G. Hunt, M. A. D. Goodisman, and S. V. Yi, 2009 DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera. Proc. Natl. Acad. Sci. USA 106: 11206-11211.
    • (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 11206-11211
    • Elango, N.1    Hunt, B.G.2    Goodisman, M.A.D.3    Yi, S.V.4
  • 12
    • 84866145900 scopus 로고    scopus 로고
    • Genome-wide association between DNA methylation and alternative splicing in an invertebrate
    • Flores, K., F. Wolschin, J. J. Corneveaux, A. N. Allen, M. J. Huentelman et al., 2012 Genome-wide association between DNA methylation and alternative splicing in an invertebrate. BMC Genomics 13: 480.
    • (2012) BMC Genomics , vol.13 , pp. 480
    • Flores, K.1    Wolschin, F.2    Corneveaux, J.J.3    Allen, A.N.4    Huentelman, M.J.5
  • 13
    • 84859465140 scopus 로고    scopus 로고
    • DNA methylation dynamics, metabolic fluxes, gene splicing, and alternative phenotypes in honey bees
    • Foret, S., R. Kucharski, M. Pellegrini, S. Feng, S. E. Jacobsen et al., 2012 DNA methylation dynamics, metabolic fluxes, gene splicing, and alternative phenotypes in honey bees. Proc. Natl. Acad. Sci. USA 109: 4968-4973.
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 4968-4973
    • Foret, S.1    Kucharski, R.2    Pellegrini, M.3    Feng, S.4    Jacobsen, S.E.5
  • 14
    • 25844524789 scopus 로고    scopus 로고
    • Paternal effects on the defensive behavior of honeybees
    • Guzman-Novoa, E., G. J. Hunt, and R. E. Page, 2005 Paternal effects on the defensive behavior of honeybees. J. Hered. 96: 376-380.
    • (2005) J. Hered. , vol.96 , pp. 376-380
    • Guzman-Novoa, E.1    Hunt, G.J.2    Page, R.E.3
  • 16
    • 0024857112 scopus 로고
    • Evidence from mitochondrial DNA that African honey bees spread as continuous maternal lineages
    • Hall, H. G., and K. Muralidharan, 1989 Evidence from mitochondrial DNA that African honey bees spread as continuous maternal lineages. Nature 339: 211-213.
    • (1989) Nature , vol.339 , pp. 211-213
    • Hall, H.G.1    Muralidharan, K.2
  • 17
    • 0041656292 scopus 로고    scopus 로고
    • The hunt for huntingtin function: interaction partners tell many different stories
    • Harjes, P., and E. E. Wanker, 2003 The hunt for huntingtin function: interaction partners tell many different stories. Trends Biochem. Sci. 28: 425-433.
    • (2003) Trends Biochem. Sci. , vol.28 , pp. 425-433
    • Harjes, P.1    Wanker, E.E.2
  • 18
    • 0027336230 scopus 로고
    • African-European honeybee hybrids have low nonintermediate metabolic capacities
    • Harrison, J. F., and H. G. Hall, 1993 African-European honeybee hybrids have low nonintermediate metabolic capacities. Nature 363: 258-260.
    • (1993) Nature , vol.363 , pp. 258-260
    • Harrison, J.F.1    Hall, H.G.2
  • 19
    • 84866736392 scopus 로고    scopus 로고
    • Reversible switching between epigenetic states in honeybee behavioral subcastes
    • Herb, B. R., F. Wolschin, K. D. Hansen, M. J. Aryee, B. Langmead et al., 2012 Reversible switching between epigenetic states in honeybee behavioral subcastes. Nat. Neurosci. 15: 1371-1373.
    • (2012) Nat. Neurosci. , vol.15 , pp. 1371-1373
    • Herb, B.R.1    Wolschin, F.2    Hansen, K.D.3    Aryee, M.J.4    Langmead, B.5
  • 20
    • 84859576773 scopus 로고    scopus 로고
    • Teneurins instruct synaptic partner matching in an olfactory map
    • Hong, W., T. J. Mosca, and L. Luo, 2012 Teneurins instruct synaptic partner matching in an olfactory map. Nature 484: 201-207.
    • (2012) Nature , vol.484 , pp. 201-207
    • Hong, W.1    Mosca, T.J.2    Luo, L.3
  • 21
    • 84876520219 scopus 로고    scopus 로고
    • Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects
    • Hunt, B. G.,K.M.Glastad, S.V. Yi, andM.A.D.Goodisman, 2013 Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects. Genome Biol. Evol. 5: 591-598.
    • (2013) Genome Biol. Evol. , vol.5 , pp. 591-598
    • Hunt, B.G.1    Glastad, K.M.2    Yi, S.V.3    Goodisman, M.A.D.4
  • 24
    • 84890455442 scopus 로고    scopus 로고
    • The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes
    • Kocher, S. D., C. Li, W. Yang, H. Tan, S. V. Yi et al., 2013 The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes. Genome Biol. 14: R142.
    • (2013) Genome Biol. , vol.14 , pp. R142
    • Kocher, S.D.1    Li, C.2    Yang, W.3    Tan, H.4    Yi, S.V.5
  • 25
    • 52149096470 scopus 로고    scopus 로고
    • Genomic imprinting and kinship in the social Hymenoptera: What are the predictions?
    • Kronauer, D. J. C., 2008 Genomic imprinting and kinship in the social Hymenoptera: What are the predictions?. J. Theor. Biol. 254: 737-740.
    • (2008) J. Theor. Biol. , vol.254 , pp. 737-740
    • Kronauer, D.J.C.1
  • 26
    • 1242338856 scopus 로고    scopus 로고
    • Huntingtin-protein interactions and the pathogenesis of Huntington's disease
    • Li, S.-H., and X.-J. Li, 2004 Huntingtin-protein interactions and the pathogenesis of Huntington's disease. Trends Genet. 20: 146-154.
    • (2004) Trends Genet. , vol.20 , pp. 146-154
    • Li, S.-H.1    Li, X.-J.2
  • 28
    • 78649955848 scopus 로고    scopus 로고
    • The honey bee epigenomes: differential methylation of brain DNA in queens and workers
    • Lyko, F., S. Foret, R. Kucharski, S. Wolf, C. Falckenhayn et al., 2010 The honey bee epigenomes: differential methylation of brain DNA in queens and workers. PLoS Biol. 8: e1000506.
    • (2010) PLoS Biol. , vol.8 , pp. e1000506
    • Lyko, F.1    Foret, S.2    Kucharski, R.3    Wolf, S.4    Falckenhayn, C.5
  • 29
    • 84901189299 scopus 로고    scopus 로고
    • Gene cocitation networks associated with worker sterility in honey bees
    • Mullen, E. K., M. Daley, A. G. Backx, and G. J. Thompson, 2014 Gene cocitation networks associated with worker sterility in honey bees. BMC Syst. Biol. 8: 38.
    • (2014) BMC Syst. Biol. , vol.8 , pp. 38
    • Mullen, E.K.1    Daley, M.2    Backx, A.G.3    Thompson, G.J.4
  • 30
    • 82055198025 scopus 로고    scopus 로고
    • IRS and TOR nutrient-signaling pathways act via juvenile hormone to influence honey bee caste fate
    • Mutti, N. S., A. G. Dolezal, F. Wolschin, J. S. Mutti, K. S. Gill et al., 2011 IRS and TOR nutrient-signaling pathways act via juvenile hormone to influence honey bee caste fate. J. Exp. Biol. 214: 3977-3984.
    • (2011) J. Exp. Biol. , vol.214 , pp. 3977-3984
    • Mutti, N.S.1    Dolezal, A.G.2    Wolschin, F.3    Mutti, J.S.4    Gill, K.S.5
  • 31
    • 79955682293 scopus 로고    scopus 로고
    • Genome-wide analysis of self-renewal in Drosophila neural stem cells by transgenic RNAi
    • Neumüller, R. A., C. Richter, A. Fischer, M. Novatchkova, K. G. Neumüller et al., 2011 Genome-wide analysis of self-renewal in Drosophila neural stem cells by transgenic RNAi. Cell Stem Cell 8: 580-593.
    • (2011) Cell Stem Cell , vol.8 , pp. 580-593
    • Neumüller, R.A.1    Richter, C.2    Fischer, A.3    Novatchkova, M.4    Neumüller, K.G.5
  • 33
    • 34147116930 scopus 로고    scopus 로고
    • The making of a social insect: developmental architectures of social design
    • Page, R. E. J., and G. V. Amdam, 2007 The making of a social insect: developmental architectures of social design. BioEssays 29: 334-343.
    • (2007) BioEssays , vol.29 , pp. 334-343
    • Page, R.E.J.1    Amdam, G.V.2
  • 34
    • 46349103594 scopus 로고    scopus 로고
    • A mitochondrial protein compendium elucidates complex I disease
    • Pagliarini, D. J., S. E. Calvo, B. Chang, S. A. Sheth, S. B. Vafai et al., 2008 A mitochondrial protein compendium elucidates complex I disease. Biol. Cell 134: 112-123.
    • (2008) Biol. Cell , vol.134 , pp. 112-123
    • Pagliarini, D.J.1    Calvo, S.E.2    Chang, B.3    Sheth, S.A.4    Vafai, S.B.5
  • 35
    • 81855206226 scopus 로고    scopus 로고
    • Comparative analyses of DNA methylation and sequence evolution using Nasonia genomes
    • Park, J., Z. Peng, J. Zeng, N. Elango, T. Park et al., 2011 Comparative analyses of DNA methylation and sequence evolution using Nasonia genomes. Mol. Biol. Evol. 28: 3345-3354.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 3345-3354
    • Park, J.1    Peng, Z.2    Zeng, J.3    Elango, N.4    Park, T.5
  • 36
    • 84860448541 scopus 로고    scopus 로고
    • High sugar-induced insulin resistance in Drosophila relies on the lipocalin neural lazarillo
    • Pasco, M. Y., and P. Léopold, 2012 High sugar-induced insulin resistance in Drosophila relies on the lipocalin neural lazarillo. PLoS ONE 7: e36583.
    • (2012) PLoS ONE , vol.7 , pp. e36583
    • Pasco, M.Y.1    Léopold, P.2
  • 37
    • 34548539025 scopus 로고    scopus 로고
    • The making of a queen: TOR pathway is a key player in diphenic caste development
    • Patel, A., M. K. Fondrk, O. Kaftanoglu, C. Emore, G. Hunt et al., 2007 The making of a queen: TOR pathway is a key player in diphenic caste development. PloS One 2: e509.
    • (2007) PloS One , vol.2 , pp. e509
    • Patel, A.1    Fondrk, M.K.2    Kaftanoglu, O.3    Emore, C.4    Hunt, G.5
  • 38
    • 2942592512 scopus 로고    scopus 로고
    • Theory of genomic imprinting conflict in social insects
    • Queller, D. C., 2003 Theory of genomic imprinting conflict in social insects. BMC Evol. Biol. 3: 15.
    • (2003) BMC Evol. Biol. , vol.3 , pp. 15
    • Queller, D.C.1
  • 39
    • 84862236831 scopus 로고    scopus 로고
    • MitoMiner: a data warehouse for mitochondrial proteomics data
    • Smith, A. C., J. A. Blackshaw, and A. J. Robinson, 2012 MitoMiner: a data warehouse for mitochondrial proteomics data. Nucleic Acids Res. 40: D1160-D1167.
    • (2012) Nucleic Acids Res. , vol.40 , pp. D1160-D1167
    • Smith, A.C.1    Blackshaw, J.A.2    Robinson, A.J.3
  • 40
    • 17744371151 scopus 로고    scopus 로고
    • The Drosophila trithorax group protein Kismet facilitates an early step in transcriptional elongation by RNA polymerase II
    • Srinivasan, S., J. A. Armstrong, R. Deuring, I. K. Dahlsveen, H. McNeill et al., 2005 The Drosophila trithorax group protein Kismet facilitates an early step in transcriptional elongation by RNA polymerase II. Development 132: 1623-1635.
    • (2005) Development , vol.132 , pp. 1623-1635
    • Srinivasan, S.1    Armstrong, J.A.2    Deuring, R.3    Dahlsveen, I.K.4    McNeill, H.5
  • 41
    • 33750460281 scopus 로고    scopus 로고
    • Insights into social insects from the genome of the honeybee, Apis mellifera
    • The Honeybee Genome Sequencing Consortium, 2006 Insights into social insects from the genome of the honeybee, Apis mellifera. Nature 443: 931-939.
    • (2006) Nature , vol.443 , pp. 931-939
  • 42
    • 34250709583 scopus 로고    scopus 로고
    • Asymmetric postmating isolation: Darwin's corollary to Haldane's rule
    • Turelli, M., and L. C. Moyle, 2007 Asymmetric postmating isolation: Darwin's corollary to Haldane's rule. Genetics 176: 1059-1088.
    • (2007) Genetics , vol.176 , pp. 1059-1088
    • Turelli, M.1    Moyle, L.C.2
  • 43
    • 84904471219 scopus 로고    scopus 로고
    • Using next-generation RNA sequencing to identify imprinted genes
    • Wang, X., and A. G. Clark, 2014 Using next-generation RNA sequencing to identify imprinted genes. Heredity 113: 156-166.
    • (2014) Heredity , vol.113 , pp. 156-166
    • Wang, X.1    Clark, A.G.2
  • 44
    • 33750486851 scopus 로고    scopus 로고
    • Functional CpG methylation system in a social insect
    • Wang, Y., M. Jorda, P. L. Jones, R. Maleszka, X. Ling et al., 2006 Functional CpG methylation system in a social insect. Science 314: 645-647.
    • (2006) Science , vol.314 , pp. 645-647
    • Wang, Y.1    Jorda, M.2    Jones, P.L.3    Maleszka, R.4    Ling, X.5
  • 45
    • 33750431066 scopus 로고    scopus 로고
    • Expression of insulin pathway genes during the period of caste determination in the honey bee, Apis mellifera
    • Wheeler, D. E., N. Buck, and J. D. Evans, 2006 Expression of insulin pathway genes during the period of caste determination in the honey bee, Apis mellifera. Insect Mol. Biol. 15: 597-602.
    • (2006) Insect Mol. Biol. , vol.15 , pp. 597-602
    • Wheeler, D.E.1    Buck, N.2    Evans, J.D.3
  • 46
    • 84857206944 scopus 로고    scopus 로고
    • Using pyrosequencing to measure allele-specific mRNA abundance and infer the effects of cis- and trans-regulatory differences
    • edited by V. Orgogozo and M. V. Rockman. Humana Press, New York
    • Wittkopp, P. J., 2011 Using pyrosequencing to measure allele-specific mRNA abundance and infer the effects of cis- and trans-regulatory differences, pp. 297-317 in Methods in Molecular Biology, edited by V. Orgogozo and M. V. Rockman. Humana Press, New York.
    • (2011) Methods in Molecular Biology , pp. 297-317
    • Wittkopp, P.J.1
  • 47
    • 64749088317 scopus 로고    scopus 로고
    • Cytonuclear interactions can favor the evolution of genomic imprinting
    • Wolf, J. B., 2009 Cytonuclear interactions can favor the evolution of genomic imprinting. Evolution 63: 1364-1371.
    • (2009) Evolution , vol.63 , pp. 1364-1371
    • Wolf, J.B.1
  • 48
    • 84904462371 scopus 로고    scopus 로고
    • Imprinted gene expression in hybrids: perturbed mechanisms and evolutionary implications
    • Wolf, J. B., R. J. Oakey, and R. Feil, 2014 Imprinted gene expression in hybrids: perturbed mechanisms and evolutionary implications. Heredity 113: 167-175.
    • (2014) Heredity , vol.113 , pp. 167-175
    • Wolf, J.B.1    Oakey, R.J.2    Feil, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.