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Volumn 13, Issue 7, 2015, Pages

Big data: Astronomical or genomical?

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ARTICLE; ASTRONOMY; BIG DATA; DATA ANALYSIS; DATA PROCESSING; DNA SEQUENCE; GENOMICS; HUMAN; INFORMATION PROCESSING; INTERNET; PHENOTYPE; COMPARATIVE STUDY; INFORMATION RETRIEVAL; SOCIAL MEDIA; STATISTICS; TRENDS;

EID: 84938709678     PISSN: 15449173     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.1002195     Document Type: Article
Times cited : (1070)

References (52)
  • 2
    • 79952781362 scopus 로고    scopus 로고
    • Creating a Buzz About Insect Genomes
    • Robinson G.E., et al., Creating a Buzz About Insect Genomes. Science, 2011. 18: 1386.
    • (2011) Science , vol.18 , pp. 1386
    • Robinson, G.E.1
  • 3
    • 84975795680 scopus 로고    scopus 로고
    • An integrated map of genetic variation from 1,092 human genomes
    • PMID: 23128226
    • Abecasis G.R., et al., An integrated map of genetic variation from 1,092 human genomes. Nature, 2012. 491(7422): 56–65 doi: 10.1038/nature11632 PMID: 23128226
    • (2012) Nature , vol.491 , Issue.7422 , pp. 56-65
    • Abecasis, G.R.1
  • 4
    • 79952395270 scopus 로고    scopus 로고
    • Cancer genomics: From discovery science to personalized medicine
    • PMID: 21383744
    • Chin L., Andersen J.N., and Futreal P.A., Cancer genomics: from discovery science to personalized medicine. Nature medicine, 2011. 17(3): 297–303 doi: 10.1038/nm.2323 PMID: 21383744
    • (2011) Nature Medicine , vol.17 , Issue.3 , pp. 297-303
    • Chin, L.1    Ersen, J.N.2    Futreal, P.A.3
  • 6
    • 84865244944 scopus 로고    scopus 로고
    • Computational social science: Making the links
    • PMID: 22914149
    • Giles J., Computational social science: Making the links. Nature, 2012. 488(7412): 448–50 doi: 10.1038/488448a PMID: 22914149
    • (2012) Nature , vol.488 , Issue.7412 , pp. 448-450
    • Giles, J.1
  • 12
    • 84938733304 scopus 로고    scopus 로고
    • EmTech: Illumina Says 228,000 Human Genomes Will Be Sequenced This Year
    • [cited 2015 April 28, 2015]
    • Regalado, A. EmTech: Illumina Says 228,000 Human Genomes Will Be Sequenced This Year. MIT Technology Review 2014 [cited 2015 April 28, 2015]; http://www.technologyreview.com/news/531091/emtech-illumina-says-228000-human-genomes-will-be-sequenced-this-year/.
    • (2014) MIT Technology Review
    • Regalado, A.1
  • 13
    • 84938733305 scopus 로고    scopus 로고
    • AllSeq, [cited 2015 April 1, 2015]
    • AllSeq. HiSeq X Ten. 2015 [cited 2015 April 1, 2015]; http://allseq.com/x-ten.
    • (2015) Hiseq X Ten
  • 14
    • 84938733306 scopus 로고    scopus 로고
    • Illumina, [cited April 28, 2015]
    • Illumina. HiSeq X Series of Sequencing Systems. 2015 [cited April 28, 2015]; http://www.illumina.com/content/dam/illumina-marketing/documents/products/datasheets/datasheet-hiseq-x-ten.pdf.
    • (2015) Hiseq X Series of Sequencing Systems
  • 15
    • 80052310753 scopus 로고    scopus 로고
    • How Many Species Are There on Earth and in the Ocean?
    • PMID: 21886479
    • Mora C., et al., How Many Species Are There on Earth and in the Ocean? PLoS Biology, 2011; 9: e1001127 doi: 10.1371/journal.pbio.1001127 PMID: 21886479
    • (2011) Plos Biology , vol.9
    • Mora, C.1
  • 16
    • 84922808438 scopus 로고    scopus 로고
    • The 3,000 rice genomes project: New opportunities and challenges for future rice research
    • PMID: 24872878
    • Li J.Y., Wang J., and Zeigler R.S., The 3,000 rice genomes project: new opportunities and challenges for future rice research. GigaScience, 2014. 3: 8 doi: 10.1186/2047-217X-3-8 PMID: 24872878
    • (2014) Gigascience , vol.3 , pp. 8
    • Li, J.Y.1    Wang, J.2    Zeigler, R.S.3
  • 17
    • 85046596825 scopus 로고    scopus 로고
    • A year of great leaps in genome research
    • PMID: 22293069
    • Zhu J., A year of great leaps in genome research. Genome medicine, 2012. 4(1): 4. doi: 10.1186/gm303 PMID: 22293069
    • (2012) Genome Medicine , vol.4 , Issue.1 , pp. 4
    • Zhu, J.1
  • 18
    • 33947221422 scopus 로고    scopus 로고
    • Environmental shotgun sequencing: Its potential and challenges for studying the hidden world of microbes
    • PMID: 17355177
    • Eisen J.A., Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes. PLoS Biology, 2007. 5(3): e82. PMID: 17355177
    • (2007) Plos Biology , vol.5 , Issue.3
    • Eisen, J.A.1
  • 19
    • 84865741828 scopus 로고    scopus 로고
    • The Human Microbiome Project: A community resource for the healthy human microbiome
    • PMID: 22904687
    • Gevers D., et al., The Human Microbiome Project: a community resource for the healthy human microbiome. PLoS Biology, 2012. 10(8): e1001377. doi: 10.1371/journal.pbio.1001377 PMID: 22904687
    • (2012) Plos Biology , vol.10 , Issue.8
    • Gevers, D.1
  • 20
    • 85053383884 scopus 로고    scopus 로고
    • Genomics England
    • Genomics England. The 100,000 Genomes Project. 2015; http://www.genomicsengland.co.uk/the-100000-genomes-project/.
    • (2015) The 100,000 Genomes Project
  • 21
    • 84938733307 scopus 로고    scopus 로고
    • Hundred thousand genomes to be mapped in Saudi Arabia
    • Briggs, H (2013) Hundred thousand genomes to be mapped in Saudi Arabia. BBC News. http://www.bbc.com/news/health-25216135
    • (2013) BBC News
    • Briggs, H.1
  • 22
    • 84929133372 scopus 로고    scopus 로고
    • Identification of a large set of rare complete human knockouts
    • PMID: 25807282
    • Sulem P., et al., Identification of a large set of rare complete human knockouts. Nature genetics, 2015; 47: 448–452. doi: 10.1038/ng.3243 PMID: 25807282
    • (2015) Nature Genetics , vol.47 , pp. 448-452
    • Sulem, P.1
  • 23
    • 84938733308 scopus 로고    scopus 로고
    • White House fleshes out Obama’s $215 million plan for precision medicine
    • Kaiser, J. White House fleshes out Obama’s $215 million plan for precision medicine. Science Insider 2015; http://news.sciencemag.org/biology/2015/01/white-house-fleshes-out-obama-s-215-millionplan-precision-medicine.
    • (2015) Science Insider
    • Kaiser, J.1
  • 24
    • 77951148450 scopus 로고    scopus 로고
    • Internet World Stats. 2015; http://www.internetworldstats.com/stats.htm.
    • (2015) Internet World Stats
  • 25
    • 84873801934 scopus 로고    scopus 로고
    • High-throughput sequencing for biology and medicine
    • PMID: 23340846
    • Soon W.W., Hariharan M., and Snyder M.P., High-throughput sequencing for biology and medicine. Molecular systems biology, 2013. 9: 640. doi: 10.1038/msb.2012.61 PMID: 23340846
    • (2013) Molecular Systems Biology , vol.9 , pp. 640
    • Soon, W.W.1    Hariharan, M.2    Snyder, M.P.3
  • 26
    • 84858433310 scopus 로고    scopus 로고
    • Personal omics profiling reveals dynamic molecular and medical phenotypes
    • PMID: 22424236
    • Chen R., et al., Personal omics profiling reveals dynamic molecular and medical phenotypes. Cell, 2012. 148(6): 1293–307. doi: 10.1016/j.cell.2012.02.009 PMID: 22424236
    • (2012) Cell , vol.148 , Issue.6 , pp. 1293-1307
    • Chen, R.1
  • 27
    • 79955554401 scopus 로고    scopus 로고
    • Efficient storage of high throughput DNA sequencing data using referencebased compression
    • PMID: 21245279
    • Hsi-Yang Fritz M., et al., Efficient storage of high throughput DNA sequencing data using referencebased compression. Genome research, 2011. 21(5): 734–40. doi: 10.1101/gr.114819.110 PMID: 21245279
    • (2011) Genome Research , vol.21 , Issue.5 , pp. 734-740
    • Hsi-Yang Fritz, M.1
  • 28
    • 84863702145 scopus 로고    scopus 로고
    • Compressive genomics
    • PMID: 22781691
    • Loh P.-R., Baym M., and Berger B., Compressive genomics. Nature Biotechnology, 2012. 30: 627–630. doi: 10.1038/nbt.2241 PMID: 22781691
    • (2012) Nature Biotechnology , vol.30 , pp. 627-630
    • Loh, P.-R.1    Baym, M.2    Berger, B.3
  • 29
    • 84913554630 scopus 로고    scopus 로고
    • One chromosome, one contig: Complete microbial genomes from longread sequencing and assembly
    • Koren S. and Phillippy A.M., One chromosome, one contig: complete microbial genomes from longread sequencing and assembly. Current opinion in microbiology, 2015. 23C: 110–120.
    • (2015) Current Opinion in Microbiology , vol.23C , pp. 110-120
    • Koren, S.1    Phillippy, A.M.2
  • 30
    • 58349097721 scopus 로고    scopus 로고
    • Human genomes as email attachments
    • PMID: 18996942
    • Christley S., et al., Human genomes as email attachments. Bioinformatics, 2009. 25(2): 274–5. doi: 10.1093/bioinformatics/btn582 PMID: 18996942
    • (2009) Bioinformatics , vol.25 , Issue.2 , pp. 274-275
    • Christley, S.1
  • 31
    • 84900328038 scopus 로고    scopus 로고
    • Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms
    • PMID: 24752080
    • Patro R., Mount S.M., and Kingsford C., Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms. Nature biotechnology, 2014. 32(5): 462–4. doi: 10.1038/nbt.2862 PMID: 24752080
    • (2014) Nature Biotechnology , vol.32 , Issue.5 , pp. 462-464
    • Patro, R.1    Mount, S.M.2    Kingsford, C.3
  • 32
    • 84883762641 scopus 로고    scopus 로고
    • Astrogenomics: Big data, old problems, old solutions?
    • Golden A., Djorgovski S., and Greally J., Astrogenomics: big data, old problems, old solutions? Genome Biology, 2013. 8: 129.
    • (2013) Genome Biology , vol.8 , pp. 129
    • Golden, A.1    Djorgovski, S.2    Greally, J.3
  • 33
    • 84938733309 scopus 로고    scopus 로고
    • Brute Force Information Retrieval Experiments using MapReduce'
    • Djoerd Hiemstra C.H., Brute Force Information Retrieval Experiments using MapReduce'. ERCIM News, 2012. 89: 31–32.
    • (2012) ERCIM News , vol.89 , pp. 31-32
    • Djoerd Hiemstra, C.H.1
  • 34
    • 84938676728 scopus 로고    scopus 로고
    • Data Transport for the Square Kilometre Array
    • Smith, B., Data Transport for the Square Kilometre Array, in UbuntuNet Alliance Annual Conference. 2012. 15–22
    • (2012) Ubuntunet Alliance Annual Conference , pp. 15-22
    • Smith, B.1
  • 35
    • 84896756656 scopus 로고    scopus 로고
    • Global Internet Phenomena Report. 2013; http://www.sandvine.com/downloads/general/globalinternet-phenomena/2013/2h-2013-global-internet-phenomena-report.pdf.
    • (2013) Global Internet Phenomena Report
  • 36
    • 80052028523 scopus 로고    scopus 로고
    • The real cost of sequencing: Higher than you think!
    • PMID: 21867570
    • Sboner A., et al., The real cost of sequencing: higher than you think! Genome Biology, 2011. 12: 125. doi: 10.1186/gb-2011-12-8-125 PMID: 21867570
    • (2011) Genome Biology , vol.12 , pp. 125
    • Sboner, A.1
  • 37
    • 84875707174 scopus 로고    scopus 로고
    • Drilling into big cancer-genome data
    • Marx, V., Drilling into big cancer-genome data. Nature Methods, 2013. 10: p. 293–297.
    • (2013) Nature Methods , vol.10 , pp. 293-297
    • Marx, V.1
  • 38
    • 77954975104 scopus 로고    scopus 로고
    • Next-generation sequencing: Adjusting to data overload
    • Baker M., Next-generation sequencing: adjusting to data overload. Nature Methods, 2010. 7: 495–499.
    • (2010) Nature Methods , vol.7 , pp. 495-499
    • Baker, M.1
  • 39
    • 84901005679 scopus 로고    scopus 로고
    • Routes for breaching and protecting genetic privacy. Nature reviews
    • PMID: 24805122
    • Erlich Y. and Narayanan A., Routes for breaching and protecting genetic privacy. Nature reviews. Genetics, 2014. 15(6): 409–21. doi: 10.1038/nrg3723 PMID: 24805122
    • (2014) Genetics , vol.15 , Issue.6 , pp. 409-421
    • Erlich, Y.1    Narayanan, A.2
  • 42
    • 72849149423 scopus 로고    scopus 로고
    • Searching for SNPs with cloud computing
    • PMID: 19930550
    • Langmead B., et al., Searching for SNPs with cloud computing. Genome Biol, 2009. 10(11): R134. doi: 10.1186/gb-2009-10-11-r134 PMID: 19930550
    • (2009) Genome Biol , vol.10 , Issue.11
    • Langmead, B.1
  • 43
    • 2942538300 scopus 로고    scopus 로고
    • Versatile and open software for comparing large genomes
    • PMID: 14759262
    • Kurtz S., et al., Versatile and open software for comparing large genomes. Genome Biol, 2004. 5(2): R12. PMID: 14759262
    • (2004) Genome Biol , vol.5 , Issue.2
    • Kurtz, S.1
  • 44
    • 79951811877 scopus 로고    scopus 로고
    • Big data, but are we ready? Nature reviews
    • Trelles O., et al., Big data, but are we ready? Nature reviews. Genetics, 2011. 12(3): 224.
    • (2011) Genetics , vol.12 , Issue.3 , pp. 224
    • Trelles, O.1
  • 45
    • 84938733311 scopus 로고    scopus 로고
    • 3D-stacked memory architectures for multi-core processors
    • Loh, G.H. 3D-stacked memory architectures for multi-core processors. in ACM SIGARCH. 2008.
    • (2008) ACM SIGARCH
    • Loh, G.H.1
  • 47
    • 77954492012 scopus 로고    scopus 로고
    • Cloud computing and the DNA data race
    • PMID: 20622843
    • Schatz M.C., Langmead B., and Salzberg S.L., Cloud computing and the DNA data race. Nature biotechnology, 2010. 28(7): 691–3. doi: 10.1038/nbt0710-691 PMID: 20622843
    • (2010) Nature Biotechnology , vol.28 , Issue.7 , pp. 691-693
    • Schatz, M.C.1    Langmead, B.2    Salzberg, S.L.3
  • 48
    • 84938695554 scopus 로고    scopus 로고
    • Global Alliance for Genomics and Health, April 28, 2015
    • Global Alliance for Genomics and Health. Global Alliance for Genomics and Health. 2015 April 28, 2015]; http://genomicsandhealth.org/.
    • (2015) Global Alliance for Genomics and Health
  • 49
    • 84870067037 scopus 로고    scopus 로고
    • Computational thinking in the era of big data biology
    • Schatz, M.C., Computational thinking in the era of big data biology. Genome Biology, 2012. 13(11): 177.
    • (2012) Genome Biology , vol.13 , Issue.11 , pp. 177
    • Schatz, M.C.1
  • 50


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