Isolation and Characterization of Oil-Degrading Microorganisms for Bench-Scale Evaluations of Autochthonous Bioaugmentation for Soil Remediation

Water, Air, and Soil Pollution

Volumn 226, Issue 8, 2015, Pages

  Ma, Jie ^a,b   Yan, Guangxu ^a,b   Ma, Wenfeng ^a,b   Cheng, Chunmao ^a,b   Wang, Qinghong ^a,b   Guo, Shaohui ^a,b  

^a CHINA UNIVERSITY OF PETROLEUM   (China)

^b CHINA UNIVERSITY OF PETROLEUM   (China)

Author keywords

Groundwater; Hydrocarbon; Isolation; Petroleum; Reinoculation; Soil

Indexed keywords

BIODEGRADATION; BIOMOLECULES; CHAINS; CONTAMINATION; CRUDE OIL; DEGRADATION; GAS CHROMATOGRAPHY; GROUNDWATER; HYDROCARBONS; IMPURITIES; MASS SPECTROMETRY; MICROBIOLOGY; MICROORGANISMS; PARAFFINS; POLLUTION; REMEDIATION; SOIL CONSERVATION; SOIL POLLUTION; SOILS; SPECTRUM ANALYSIS; STRAIN; SURFACE ACTIVE AGENTS;

BIOAUGMENTATION AGENTS; BIOCHEMICAL CHARACTERIZATION; BIOSURFACTANT PRODUCTION; ISOLATION; ISOLATION AND CHARACTERIZATION; MASS SPECTRUM ANALYSIS; REINOCULATION; REMEDIATION TECHNOLOGIES;

LAND RECLAMATION;

BIOSURFACTANT; PETROLEUM;

BIODEGRADATION; CRUDE OIL; GROUNDWATER; HYDROCARBON; MICROCOSM; MICROORGANISM; OIL POLLUTION; SOIL POLLUTION; SOIL REMEDIATION; SURFACTANT;

ACTINOBACTERIA; ARTICLE; AUTOCHTHONOUS BIOAUGMENTATION; BACTERIAL STRAIN; BACTERIUM CULTURE; BIODEGRADATION; BIOREMEDIATION; CHINA; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; GAS CHROMATOGRAPHY; MASS SPECTROMETRY; MICROCOSM; MICROORGANISM; MORPHOLOGY; NOCARDIA; NONHUMAN; OIL INDUSTRY; PH; PSEUDOMONAS; SOIL POLLUTANT; SOIL POLLUTION; SOIL TREATMENT; STREPTOMYCES; TEMPERATURE SENSITIVITY;

CHINA;

EID: 84938590133     PISSN: 00496979     EISSN: 15732932     Source Type: Journal    
DOI: 10.1007/s11270-015-2491-6     Document Type: Article

References (44)

1. Alvarez, P. J., & Illman, W. A. (2005). Bioremediation and natural attenuation: process fundamentals and mathematical models. Hoboken: Wiley-Interscience.
2. Atlas, R. M., & Bartha, R. (1997). Microbial ecology: fundamentals and applications. Redwood City: Benjamin Cummings.
3. C Balachandran V Duraipandiyan K Balakrishna S Ignacimuthu 2012 Petroleum and polycyclic aromatic hydrocarbons (PAHs) degradation and naphthalene metabolism in Streptomyces sp (ERI-CPDA-1) isolated from oil contaminated soil Bioresource Technology 112 83 90 1:CAS:528:DC%2BC38XkvFOksLo%3D 10.1016/j.biortech.2012.02.059
4. G Barabas G Vargha IM Szabo A Penyige S Damjanovich J Szollosi, et al. 2001 n-Alkane uptake and utilisation by Streptomyces strains Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology 79 269 276 1:CAS:528:DC%2BD3MXpt12lsrk%3D 10.1023/A:1012030309817
5. Bedient, P. B., Rifai, H. S., & Newell, C. J. (1999). Ground water contamination: transport and remediation (second edition). Upper Saddle River: PTR Prentice Hall.
6. SS Cameotra JM Bollag 2003 Biosurfactant-enhanced bioremediation of polycyclic aromatic hydrocarbons Critical Reviews in Environmental Science and Technology 33 111 126 1:CAS:528:DC%2BD3sXksVGktL8%3D 10.1080/10643380390814505
7. JR Davis JK Sello 2010 Regulation of genes in Streptomyces bacteria required for catabolism of lignin-derived aromatic compounds Applied Microbiology and Biotechnology 86 921 929 1:CAS:528:DC%2BC3cXjtlalurk%3D 10.1007/s00253-009-2358-0
8. Dong, X., & Cai, M. (2011). System identification manual of common bacteria (second edition). Beijing: Science Press.
9. S El Fantroussi SN Agathos 2005 Is bioaugmentation a feasible strategy for pollutant removal and site remediation? Current Opinion in Microbiology 8 268 275 10.1016/j.mib.2005.04.011
10. FZ Ferradji S Mnif A Badis S Rebbani D Fodil K Eddouaouda, et al. 2014 Naphthalene and crude oil degradation by biosurfactant producing Streptomyces spp. isolated from Mitidja Plain soil (North of Algeria) International Biodeterioration & Biodegradation 86 300 308 1:CAS:528:DC%2BC3sXhslOrs7jM 10.1016/j.ibiod.2013.10.003
11. Griffiths, P. R., & Haseth, J. A. D. (2007). Fourier transform infrared spectrometry (second edition). Hoboken: Wiley-Interscience.
12. TS Gunasekera RC Striebich SS Mueller EM Strobel ON Ruiz 2013 Transcriptional profiling suggests that multiple metabolic adaptations are required for effective proliferation of Pseudomonas aeruginosa in jet fuel Environmental Science & Technology 47 13449 13458 1:CAS:528:DC%2BC3sXhs1ygs7bI 10.1021/es403163k
13. Holt, J. G. (1994). Bergey's manual of determinative bacteriology. Baltimore: Williams & Wilkins.
14. R Hosokawa M Nagai M Morikawa H Okuyama 2009 Autochthonous bioaugmentation and its possible application to oil spills World Journal of Microbiology and Biotechnology 25 1519 1528 1:CAS:528:DC%2BD1MXpsVeiurk%3D 10.1007/s11274-009-0044-0
15. X-F Huang J Liu L-J Lu Y Wen J-C Xu D-H Yang, et al. 2009 Evaluation of screening methods for demulsifying bacteria and characterization of lipopeptide bio-demulsifier produced by Alcaligenes sp Bioresource Technology 100 1358 1365 1:CAS:528:DC%2BD1cXhtlOhtLvE 10.1016/j.biortech.2008.08.004
16. DH Lee SR Moon YH Park JH Kim H Kim RE Parales, et al. 2010 Pseudomonas taeanensis sp nov., isolated from a crude oil-contaminated seashore International Journal of Systematic and Evolutionary Microbiology 60 2719 2723 1:CAS:528:DC%2BC3MXhsVOjsbc%3D 10.1099/ijs.0.018093-0
17. Liu, H., Xu, J., Liang, R. & Liu, J. (2014). Characterization of the medium- and long-chain n-alkanes degrading Pseudomonas aeruginosa strain SJTD-1 and its alkane hydroxylase genes. Plos One. 9.
18. FE Loffler EA Edwards 2006 Harnessing microbial activities for environmental cleanup Current Opinion in Biotechnology 17 274 284 10.1016/j.copbio.2006.05.001
19. Q Luo S Hiessl A Steinbüchel 2014 Functional diversity of Nocardia in metabolism Environmental Microbiology 16 29 48 1:CAS:528:DC%2BC2cXlsFyltw%3D%3D 10.1111/1462-2920.12221
20. J Ma Z Xiu A Monier I Mamonkina Y Zhang Y He, et al. 2011 Aesthetic groundwater quality impacts from a continuous pilot-scale release of an ethanol blend Ground Water Monitoring & Remediation 31 47 54 10.1111/j.1745-6592.2011.01334.x
21. J Ma WG Rixey PJJ Alvarez 2013 Microbial processes influencing the transport, fate and groundwater impacts of fuel ethanol releases Current Opinion in Biotechnology 24 457 466 1:CAS:528:DC%2BC38XhsVSlsLfP 10.1016/j.copbio.2012.09.005
22. J Ma WG Rixey PJJ Alvarez 2015 Increased fermentation activity and persistent methanogenesis in a model aquifer system following source removal of an ethanol blend release Water Research 68 479 486 1:CAS:528:DC%2BC2cXhsl2gtL%2FP 10.1016/j.watres.2014.10.023
23. Madigan, M. T., & Martinko, J. M. (2006). Brock biology of microorganisms. Upper Saddle River: Pearson/Prentice Hall.
24. MEP-China. (2012). Water quality-determination of petroleum oil, animal and vegetable oils-infrared photometric method (HJ 637-2012). Chinese Ministry of Environmental Protection.
25. LT Nhi-Cong A Mikolasch S Awe H Sheikhany H-P Klenk F Schauer 2010 Oxidation of aliphatic, branched chain, and aromatic hydrocarbons by Nocardia cyriacigeorgica isolated from oil-polluted sand samples collected in the Saudi Arabian Desert Journal of Basic Microbiology 50 241 253 1:CAS:528:DC%2BC3cXhtVehtL3J 10.1002/jobm.200900358
26. J Qiu 2010 China faces up to groundwater crisis Nature 466 308 308 1:CAS:528:DC%2BC3cXosl2rtL4%3D 10.1038/466308a
27. J Qiu 2011 China to spend billions cleaning up groundwater Science 334 745 1:CAS:528:DC%2BC3MXhs1ant7jL 10.1126/science.334.6057.745
28. P Quatrini G Scaglione C De Pasquale S Riela AM Puglia 2008 Isolation of gram-positive n-alkane degraders from a hydrocarbon-contaminated Mediterranean shoreline Journal of Applied Microbiology 104 251 259 1:CAS:528:DC%2BD1cXisVOgtrw%3D
29. SS Radwan G Barabas NA Sorkhoh S Damjanovich I Szabo J Szollosi, et al. 1998 Hydrocarbon uptake by Streptomyces Fems Microbiology Letters 169 87 94 1:CAS:528:DyaK1cXnslOksr4%3D 10.1111/j.1574-6968.1998.tb13303.x
30. LR Rodrigues JA Teixeira HC van der Mei R Oliveira 2006 Isolation and partial characterization of a biosurfactant produced by Streptococcus thermophilus A Colloids and Surfaces B: Biointerfaces 53 105 112 1:CAS:528:DC%2BD28XhtFWjtbnP 10.1016/j.colsurfb.2006.08.009
31. I Saadoun M Alawawdeh Z Jaradat Q Ababneh 2008 Growth of Streptomyces spp. From hydrocarbon-polluted soil on diesel and their analysis for the presence of alkane hydroxylase gene (alkB) by PCR World Journal of Microbiology and Biotechnology 24 2191 2198 1:CAS:528:DC%2BD1cXhtVWgurfO 10.1007/s11274-008-9729-z
32. R Salgado-Brito MI Neria AM Mesta-Howard F Diaz Cedillo ET Wang 2007 Oxidation of solid paraffin (C11-40) by Pseudomonas aeruginosa MGP-1 Annals of Microbiology 57 321 328 1:CAS:528:DC%2BD2sXhtlWjsLfF 10.1007/BF03175067
33. Y-h She F Zhang J-j Xia S-q Kong Z-i Wang F-c Shu, et al. 2011 Investigation of biosurfactant-producing indigenous microorganisms that enhance residue oil recovery in an oil reservoir after polymer flooding Applied Biochemistry and Biotechnology 163 223 234 1:CAS:528:DC%2BC3MXhsVCjs7w%3D 10.1007/s12010-010-9032-y
34. Smith, B. C. (2011). Fundamentals of Fourier transform infrared spectroscopy (second edition). Boca Raton: CRC Press.
35. EC Souza TC Vessoni-Penna RP de Souza Oliveira 2014 Biosurfactant-enhanced hydrocarbon bioremediation: an overview International Biodeterioration & Biodegradation 89 88 94 1:CAS:528:DC%2BC2cXjvFWhtrg%3D 10.1016/j.ibiod.2014.01.007
36. C Swaranjit Singh RS Makkar 2010 Biosurfactant-enhanced bioremediation of hydrophobic pollutants Pure and Applied Chemistry 82 97 116
37. IP Thompson CJ van der Gast L Ciric AC Singer 2005 Bioaugmentation for bioremediation: the challenge of strain selection Environmental Microbiology 7 909 915 1:CAS:528:DC%2BD2MXmtFyqu7s%3D 10.1111/j.1462-2920.2005.00804.x
38. A Ueno Y Ito I Yumoto H Okuyama 2007 Isolation and characterization of bacteria from soil contaminated with diesel oil and the possible use of these in autochthonous bioaugmentation World Journal of Microbiology and Biotechnology 23 1739 1745 1:CAS:528:DC%2BD2sXhtFSlu7jL 10.1007/s11274-007-9423-6
39. JA van Veen LS van Overbeek JD van Elsas 1997 Fate and activity of microorganisms introduced into soil Microbiology and Molecular Biology Reviews 61 121
40. WJ Weber Jr HX Corseuil 1994 Inoculation of contaminated subsurface soils with enriched indigenous microbes to enhance bioremediation rates Water Research 28 1407 1414 1:CAS:528:DyaK2cXjtVKmtb0%3D 10.1016/0043-1354(94)90308-5
41. LG Whyte L Bourbonniere CW Greer 1997 Biodegradation of petroleum hydrocarbons by psychrotrophic Pseudomonas strains possessing both alkane (alk) and naphthalene (nah) catabolic pathways Applied and Environmental Microbiology 63 3719 3723 1:CAS:528:DyaK2sXmtVKhu7g%3D
42. NH Youssef KE Duncan DP Nagle KN Savage RM Knapp MJ McInerney 2004 Comparison of methods to detect biosurfactant production by diverse microorganisms Journal of Microbiological Methods 56 339 347 1:CAS:528:DC%2BD2cXht1ykur0%3D 10.1016/j.mimet.2003.11.001
43. L Yuste M a E Corbella M a J Turiégano U Karlson A Puyet F Rojo 2000 Characterization of bacterial strains able to grow on high molecular mass residues from crude oil processing Fems Microbiology Ecology 32 69 75 1:CAS:528:DC%2BD3cXisFGltr0%3D 10.1111/j.1574-6941.2000.tb00700.x
44. C Zheng J Liu 2013 China's "love canal" moment? Science 340 810 1:CAS:528:DC%2BC3sXot1aisbo%3D 10.1126/science.340.6134.810-a