Genetic and antigenic characterization of H5 and H7 influenza viruses isolated from migratory water birds in Hokkaido, Japan and Mongolia from 2010 to 2014

Virus Genes

Volumn 51, Issue 1, 2015, Pages 57-68

  Hiono, Takahiro ^a   Ohkawara, Ayako ^a   Ogasawara, Kohei ^a   Okamatsu, Masatoshi ^a   Tamura, Tomokazu ^a   Chu, Duc Huy ^a   Suzuki, Mizuho ^a   Kuribayashi, Saya ^a   Shichinohe, Shintaro ^a   Takada, Ayato ^b   Ogawa, Hirohito ^b   Yoshida, Reiko ^b   Miyamoto, Hiroko ^b   Nao, Naganori ^b   Furuyama, Wakako ^b   Maruyama, Junki ^b   Eguchi, Nao ^b   Ulziibat, Gerelmaa ^c   Enkhbold, Bazarragchaa ^c   Shatar, Munkhduuren ^c   Jargalsaikhan, Tserenjav ^c   Byambadorj, Selenge ^c   Damdinjav, Batchuluun ^c   Sakoda, Yoshihiro ^a,b   Kida, Hiroshi ^a,b   more..

^a HOKKAIDO UNIVERSITY   (Japan)

^b HOKKAIDO UNIVERSITY   (Japan)

^c State Central Veterinary Laboratory   (Mongolia)

Author keywords

Antigenic analysis; Avian influenza; Migratory water birds; Phylogenetic analysis; Surveillance

Indexed keywords

VIRUS ANTIGEN; VIRUS RNA;

ANTIGEN DETECTION; ANTIGENICITY; ARTICLE; AUTUMN; AVIAN INFLUENZA; CHINA; DISEASE SURVEILLANCE; FECES ANALYSIS; GENETIC ANALYSIS; GENETIC VARIABILITY; HA GENE; HOST; INFLUENZA A; INFLUENZA A (H5N1); INFLUENZA A (H7N9); INFLUENZA VIRUS A H5N1; INFLUENZA VIRUS A H7N9; JAPAN; MIGRANT BIRD; MONGOLIA; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POULTRY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; VIRAL GENETICS; VIRUS GENE; VIRUS ISOLATION; VIRUS TRANSMISSION; WATER BIRD; WILD SPECIES; ANIMAL; BIRD; CLUSTER ANALYSIS; DNA SEQUENCE; FECES; GENETIC VARIATION; GENETICS; INFLUENZA A VIRUS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; SEQUENCE HOMOLOGY; VIROLOGY;

AVES; AVIAN INFLUENZA VIRUS; INFLUENZA A VIRUS; ORTHOMYXOVIRIDAE;

ANIMALS; ANTIGENS, VIRAL; BIRDS; CLUSTER ANALYSIS; FECES; GENETIC VARIATION; INFLUENZA A VIRUS; INFLUENZA IN BIRDS; JAPAN; MOLECULAR SEQUENCE DATA; MONGOLIA; PHYLOGENY; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY;

EID: 84938422064     PISSN: 09208569     EISSN: 1572994X     Source Type: Journal    
DOI: 10.1007/s11262-015-1214-9     Document Type: Article

References (38)

1. R.A. Fouchier, V. Munster, A. Wallensten, T.M. Bestebroer, S. Herfst, D. Smith, G.F. Rimmelzwaan, B. Olsen, A.D. Osterhaus, J. Virol. 79, 2814–2822 (2005)
2. H. Kida, R. Yanagawa, Zentralbl. Bakteriol. Orig. A 244, 135–143 (1979)
3. S. Tong, Y. Li, P. Rivailler, C. Conrardy, D.A. Castillo, L.M. Chen, S. Recuenco, J.A. Ellison, C.T. Davis, I.A. York, A.S. Turmelle, D. Moran, S. Rogers, M. Shi, Y. Tao, M.R. Weil, K. Tang, L.A. Rowe, S. Sammons, X. Xu, M. Frace, K.A. Lindblade, N.J. Cox, L.J. Anderson, C.E. Rupprecht, R.O. Donis, Proc. Natl. Acad. Sci. USA 109, 4269–4274 (2012)
4. S. Tong, X. Zhu, Y. Li, M. Shi, J. Zhang, M. Bourgeois, H. Yang, X. Chen, S. Recuenco, J. Gomez, L.M. Chen, A. Johnson, Y. Tao, C. Dreyfus, W. Yu, R. McBride, P.J. Carney, A.T. Gilbert, J. Chang, Z. Guo, C.T. Davis, J.C. Paulson, J. Stevens, C.E. Rupprecht, E.C. Holmes, I.A. Wilson, R.O. Donis, PLoS Pathog. 9, e1003657 (2013)
5. H. Kida, R. Yanagawa, Y. Matsuoka, Infect. Immun. 30, 547–553 (1980)
6. T. Ito, K. Okazaki, Y. Kawaoka, A. Takada, R.G. Webster, H. Kida, Arch. Virol. 140, 1163–1172 (1995)
7. H. Kida, Glob. Environ. Res. 12, 9–14 (2008)
8. World Organisation for Animal Health. Update on highly pathogenic avian influenza in animals (Type H5 and H7). http://www.oie.int/animal-health-in-the-world/web-portal-on-avian-influenza/. Accessed 15 May 2015
9. J. Liu, H. Xiao, F. Lei, Q. Zhu, K. Qin, X.W. Zhang, X.L. Zhang, D. Zhao, G. Wang, Y. Feng, J. Ma, W. Liu, J. Wang, G.F. Gao, Science 309, 1206 (2005)
10. M. Okamatsu, T. Tanaka, N. Yamamoto, Y. Sakoda, T. Sasaki, Y. Tsuda, N. Isoda, N. Kokumai, A. Takada, T. Umemura, H. Kida, Virus Genes 41, 351–357 (2010)
11. Y. Sakoda, S. Sugar, D. Batchluun, T.O. Erdene-Ochir, M. Okamatsu, N. Isoda, K. Soda, H. Takakuwa, Y. Tsuda, N. Yamamoto, N. Kishida, K. Matsuno, E. Nakayama, M. Kajihara, A. Yokoyama, A. Takada, R. Sodnomdarjaa, H. Kida, Virology 406, 88–94 (2010)
12. M. Kajihara, K. Matsuno, E. Simulundu, M. Muramatsu, O. Noyori, R. Manzoor, E. Nakayama, M. Igarashi, D. Tomabechi, R. Yoshida, M. Okamatsu, Y. Sakoda, K. Ito, H. Kida, A. Takada, Jpn. J. Vet. Res. 59, 89–100 (2011)
13. Y.J. Lee, H.M. Kang, E.K. Lee, B.M. Song, J. Jeong, Y.K. Kwon, H.R. Kim, K.J. Lee, M.S. Hong, I. Jang, K.S. Choi, J.Y. Kim, H.J. Lee, M.S. Kang, O.M. Jeong, J.H. Baek, Y.S. Joo, Y.H. Park, H.S. Lee, Emerg. Infect. Dis. 20, 1087–1089 (2014)
14. H. Wu, X. Peng, L. Xu, C. Jin, L. Cheng, X. Lu, T. Xie, H. Yao, N. Wu, Emerg. Infect. Dis. 20, 1315–1318 (2014)
15. Z. Chen, K. Li, L. Luo, E. Lu, J. Yuan, H. Liu, J. Lu, B. Di, X. Xiao, Z. Yang, PLoS ONE 9, e107266 (2014)
16. R. Gao, B. Cao, Y. Hu, Z. Feng, D. Wang, W. Hu, J. Chen, Z. Jie, H. Qiu, K. Xu, X. Xu, H. Lu, W. Zhu, Z. Gao, N. Xiang, Y. Shen, Z. He, Y. Gu, Z. Zhang, Y. Yang, X. Zhao, L. Zhou, X. Li, S. Zou, Y. Zhang, L. Yang, J. Guo, J. Dong, Q. Li, L. Dong, Y. Zhu, T. Bai, S. Wang, P. Hao, W. Yang, J. Han, H. Yu, D. Li, G.F. Gao, G. Wu, Y. Wang, Z. Yuan, Y. Shu, N. Engl. J. Med. 368, 1888–1897 (2013)
17. R. Manzoor, Y. Sakoda, A. Mweene, Y. Tsuda, N. Kishida, G.R. Bai, K. Kameyama, N. Isoda, K. Soda, M. Naito, H. Kida, Virus Genes 37, 144–152 (2008)
18. K. Okazaki, A. Takada, T. Ito, M. Imai, H. Takakuwa, M. Hatta, H. Ozaki, T. Tanizaki, T. Nagano, A. Ninomiya, V.A. Demenev, M.M. Tyaptirganov, T.D. Karatayeva, S.S. Yamnikova, D.K. Lvov, H. Kida, Arch. Virol. 145, 885–893 (2000)
19. R.A. Samad, Y. Sakoda, Y. Tsuda, E. Simulundu, R. Manzoor, M. Okamatsu, K. Ito, H. Kida, Jpn. J. Vet. Res. 59, 15–22 (2011)
20. N. Yamamoto, Y. Sakoda, M. Motoshima, F. Yoshino, K. Soda, M. Okamatsu, H. Kida, Virol J 8, 65 (2011);
21. E. Hoffmann, J. Stech, Y. Guan, R.G. Webster, D.R. Perez, Arch. Virol. 146, 2275–2289 (2001)
22. H. Kida, L.E. Brown, R.G. Webster, Virology 122, 38–47 (1982)
23. S. Sakabe, Y. Sakoda, Y. Haraguchi, N. Isoda, K. Soda, H. Takakuwa, K. Saijo, A. Sawata, K. Kume, J. Hagiwara, K. Tuchiya, Z. Lin, R. Sakamoto, T. Imamura, T. Sasaki, N. Kokumai, Y. Kawaoka, H. Kida, Vaccine 26, 2127–2134 (2008)
24. K. Soda, H. Ozaki, Y. Sakoda, N. Isoda, Y. Haraguchi, S. Sakabe, N. Kuboki, N. Kishida, A. Takada, H. Kida, Arch. Virol. 153, 2041–2048 (2008)
25. N. Isoda, Y. Sakoda, N. Kishida, K. Soda, S. Sakabe, R. Sakamoto, T. Imamura, M. Sakaguchi, T. Sasaki, N. Kokumai, T. Ohgitani, K. Saijo, A. Sawata, J. Hagiwara, Z. Lin, H. Kida, Arch. Virol. 153, 1685–1692 (2008)
26. S. Shichinohe, M. Okamatsu, N. Yamamoto, Y. Noda, Y. Nomoto, T. Honda, N. Takikawa, Y. Sakoda, H. Kida, Vet. Microbiol. 164, 39–45 (2013)
27. I.A. Wilson, J.J. Skehel, D.C. Wiley, Nature 289, 366–373 (1981)
28. J.C. Paulson, R.P. de Vries, Virus Res. 178, 99–113 (2013)
29. T. Watanabe, M. Kiso, S. Fukuyama, N. Nakajima, M. Imai, S. Yamada, S. Murakami, S. Yamayoshi, K. Iwatsuki-Horimoto, Y. Sakoda, E. Takashita, R. McBride, T. Noda, M. Hatta, H. Imai, D. Zhao, N. Kishida, M. Shirakura, R.P. de Vries, S. Shichinohe, M. Okamatsu, T. Tamura, Y. Tomita, N. Fujimoto, K. Goto, H. Katsura, E. Kawakami, I. Ishikawa, S. Watanabe, M. Ito, Y. Sakai-Tagawa, Y. Sugita, R. Uraki, R. Yamaji, A.J. Eisfeld, G. Zhong, S. Fan, J. Ping, E.A. Maher, A. Hanson, Y. Uchida, T. Saito, M. Ozawa, G. Neumann, H. Kida, T. Odagiri, J.C. Paulson, H. Hasegawa, M. Tashiro, Y. Kawaoka, Nature 501, 551–555 (2013)
30. M.J. Pantin-Jackwood, P.J. Miller, E. Spackman, D.E. Swayne, L. Susta, M. Costa-Hurtado, D.L. Suarez, J. Virol. 88, 5381–5390 (2014)
31. Z. Yang, R. Nielsen, N. Goldman, A.M. Pedersen, Genetics 155, 431–449 (2000)
32. K.E. Magor, Dev. Comp. Immunol. 35, 1008–1016 (2011)
33. C. Chaise, A.C. Lalmanach, H. Marty, S.M. Soubies, G. Croville, J. Loupias, D. Marc, P. Quéré, Guérin J.L. PLoS ONE 9, e105189 (2014)
34. H. Kida, Y. Kawaoka, C.W. Naeve, R.G. Webster, Virology 159, 109–119 (1987)
35. T. Hu, J. Song, W. Zhang, H. Zhao, B. Duan, Q. Liu, W. Zeng, W. Qiu, G. Chen, Y. Zhang, Q. Fan, F. Zhang, Infect. Genet. Evol. (2015). doi:10.1016/j.meegid.2015.04.016
36. Z.M. Zhao, K.F. Shortridge, M. Garcia, Y. Guan, X.F. Wan, J. Gen. Virol. 89, 2182–2193 (2008)
37. D.H. Chu, Y. Sakoda, T. Nishi, T. Hiono, S. Shichinohe, M. Okamatsu, H. Kida, Vaccine 32, 3473–3479 (2014)
38. World Health Organization/World Organisation for Animal Health/Food and Agriculture Organization (WHO/OIE/FAO) H5N1 Evolution Working Group, Influenza Other Respir. Viruses 8, 384–388 (2014)