Emergence of novel clade 2.3.4 influenza A (H5N1) virus subgroups in Yunnan Province, China

Infection, Genetics and Evolution

Volumn 33, Issue , 2015, Pages 95-100

  Hu, Tingsong ^a   Song, Jianling ^b   Zhang, Wendong ^c   Zhao, Huanyun ^c   Duan, Bofang ^c   Liu, Qingliang ^c,d   Zeng, Wei ^c,d   Qiu, Wei ^a   Chen, Gang ^a   Zhang, Yingguo ^c   Fan, Quanshui ^a   Zhang, Fuqiang ^a  

^a SHENZHEN CENTER FOR DISEASE CONTROL AND PREVENTION   (China)

^b Yunnan Tropical and Subtropical Animal Virus Diseases Laboratory   (China)

^c Disease Prevention and Control Centre   (China)

^d YUNNAN AGRICULTURAL UNIVERSITY   (China)

Author keywords

Clade 2.3.4; H5N1; Highly pathogenic avian influenza

Indexed keywords

ARTICLE; BIOASSAY; CHICKEN; CHINA; CLADISTICS; CONTROLLED STUDY; EPIDEMIC; GENE SEQUENCE; INFLUENZA VIRUS A; INFLUENZA VIRUS A H5N1; INFLUENZA VIRUS A H5N6; INFLUENZA VIRUS A H5N8; NONHUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS; VIRUS CHARACTERIZATION; VIRUS GENE; VIRUS GENOME; VIRUS ISOLATION; VIRUS STRAIN; CLASSIFICATION; COMMUNICABLE DISEASE; GENETICS; GENOTYPE; HUMAN; INFLUENZA A VIRUS (H5N1); INFLUENZA, HUMAN; MUTATION; PHYLOGENY; VIROLOGY;

AVES; INFLUENZA A VIRUS;

INFLUENZA VIRUS HEMAGGLUTININ; SIALIDASE; VIRAL PROTEIN;

CHINA; COMMUNICABLE DISEASES, EMERGING; GENOTYPE; HEMAGGLUTININ GLYCOPROTEINS, INFLUENZA VIRUS; HUMANS; INFLUENZA A VIRUS, H5N1 SUBTYPE; INFLUENZA, HUMAN; MUTATION; NEURAMINIDASE; PHYLOGENY; VIRAL PROTEINS;

EID: 84937971390     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2015.04.016     Document Type: Article

References (15)

1. Dharmayanti N.L., Hartawan R., Wibawa H., Balish A., Donis R., Davis C.T., Samaan G. Genetic characterization of clade 2.3.2.1 avian influenza A(H5N1) viruses, Indonesia, 2012. Emerg. Infect. Dis. 2014, 20:677-680.
2. Duan L., Campitelli L., Fan X.H., Leung Y.H., Vijaykrishna D., Zhang J.X., Donatelli I., Delogu M., Li K.S., Foni E., Chiapponi C., Wu W.L., Kai H., Webster R.G., Shortridge K.F., Peiris J.S., Smith G.J., Chen H., Guan Y. Characterization of low-pathogenic H5 subtype influenza viruses from Eurasia: implications for the origin of highly pathogenic H5N1 viruses. J. Virol. 2007, 81:7529-7539.
3. Fouchier R.A., Bestebroer T.M., Herfst S., Van Der Kemp L., Rimmelzwaan G.F., Osterhaus A.D. Detection of influenza A viruses from different species by PCR amplification of conserved sequences in the matrix gene. J. Clin. Microbiol. 2000, 38:4096-4101.
4. Gambaryan A.S., Tuzikov A.B., Bovin N.V., Yamnikova S.S., Lvov D.K., Webster R.G., Matrosovich M.N. Differences between influenza virus receptors on target cells of duck and chicken and receptor specificity of the 1997 H5N1 chicken and human influenza viruses from Hong Kong. Avian Dis. 2003, 47:1154-1160.
5. Toward a unified nomenclature system for highly pathogenic avian influenza virus (H5N1). Emerg. Infect. Dis. 2008, 14:e1. Group., W.O.F.H.N.E.W.
6. Continuing progress towards a unified nomenclature for the highly pathogenic H5N1 avian influenza viruses: divergence of clade 2.2 viruses. Influenza Other Respir. Viruses 2009, 3:59-62. Group., W.O.F.H.N.E.W.
7. Continued evolution of highly pathogenic avian influenza A (H5N1): updated nomenclature. Influenza Other Respir. Viruses 2012, 6:1-5. Group., W.O.F.H.N.E.W.
8. Gu M., Zhao G., Zhao K., Zhong L., Huang J., Wan H., Wang X., Liu W., Liu H., Peng D., Liu X. Novel variants of clade 2.3.4 highly pathogenic avian influenza A(H5N1) viruses. China Emerg. Infect. Dis. 2013, 19:2021-2024.
9. Hoffmann E., Stech J., Guan Y., Webster R.G., Perez D.R. Universal primer set for the full-length amplification of all influenza A viruses. Arch. Virol. 2001, 146:2275-2289.
10. Kayali G., Setterquist S.F., Capuano A.W., Myers K.P., Gill J.S., Gray G.C. Testing human sera for antibodies against avian influenza viruses: horse RBC hemagglutination inhibition vs. microneutralization assays. J. Clin. Virol. 2008, 43:73-78.
11. Kayali G., Kandeil A., El-Shesheny R., Kayed A.S., Gomaa M.M., Maatouq A.M., Shehata M.M., Moatasim Y., Bagato O., Cai Z., Rubrum A., Kutkat M.A., McKenzie P.P., Webster R.G., Webby R.J., Ali M.A. Active surveillance for avian influenza virus, Egypt, 2010-2012. Emerg. Infect. Dis. 2014, 20:542-551.
12. Munster V.J., de Wit E., van Riel D., Beyer W.E., Rimmelzwaan G.F., Osterhaus A.D., Kuiken T., Fouchier R.A. The molecular basis of the pathogenicity of the Dutch highly pathogenic human influenza A H7N7 viruses. J. Infect. Dis. 2007, 196:258-265.
13. Stevens J., Blixt O., Tumpey T.M., Taubenberger J.K., Paulson J.C., Wilson I.A. Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus. Science 2006, 312:404-410.
14. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
15. Antigenic and Genetic Characteristics of Zoonotic Influenza Viruses and Development of Candidate Vaccine Viruses for Pandemic Preparedness 2015, WHO, World Health Organization (WHO), February 2015, 10.