A novel mycovirus identified from the rice false smut fungus Ustilaginoidea virens

Virus Genes

Volumn 51, Issue 1, 2015, Pages 159-162

  Zhu, Hong Jian ^a   Chen, Dan ^a   Zhong, Jie ^a   Zhang, Shuai Yang ^a   Gao, Bi Da ^a  

^a HUNAN AGRICULTURAL UNIVERSITY   (China)

Author keywords

Mycovirus; Unclassified family; Ustilaginoidea virens

Indexed keywords

DOUBLE STRANDED RNA; RNA DIRECTED RNA POLYMERASE; VIRUS RNA;

ALTERNARIA; ALTERNARIA LONGIPES DOUBLE STRANDED RNA VIRUS 1; ARTICLE; CONTROLLED STUDY; FUNGUS; FUNGUS IDENTIFICATION; GENOME SIZE; MYCOVIRUS; NEW GENUS; NONHUMAN; OPEN READING FRAME; OVERLAPPING GENE; PARTITIVIRIDAE; PHYLOGENY; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RICE FALSE SMUT FUNGUS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; UNTRANSLATED REGION; USTILAGINOIDEA VIRENS; USTILAGINOIDEA VIRENS UNASSIGNED RNA VIRUS HNND 1; VIRUS GENOME; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; GENETICS; HYPOCREALES; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; ORYZA; PLANT DISEASE; RNA VIRUS; VIROLOGY;

ALTERNARIA LONGIPES; DSRNA VIRUSES; FUNGI; PARTITIVIRIDAE; RNA VIRUSES; UNCLASSIFIED VIRUSES; USTILAGINOIDEA VIRENS;

CLUSTER ANALYSIS; FUNGAL VIRUSES; GENOME, VIRAL; HYPOCREALES; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; ORYZA; PHYLOGENY; PLANT DISEASES; RNA REPLICASE; RNA VIRUSES; RNA, DOUBLE-STRANDED; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 84938417702     PISSN: 09208569     EISSN: 1572994X     Source Type: Journal    
DOI: 10.1007/s11262-015-1212-y     Document Type: Article

References (23)

1. S.A. Ghabrial, N. Suzuki, Viruses of plant pathogenic fungi. Annu. Rev. Phytopathol. 47, 353–384 (2009)
2. M.N. Pearson, R.E. Beever, B. Boine, K. Arthur, Mycoviruses of filamentous fungi and their relevance to plant pathology. Mol. Plant Pathol. 10, 115–128 (2009)
3. J. Xie, D.H. Jiang, New insights into mycoviruses and exploration for the biological control of crop fungal diseases. Annu. Rev. Phytopathol. 52, 45–68 (2014)
4. D.L. Nuss, Hypovirulence: mycoviruses at the fungal-plant interface. Nat. Rev. Microbiol. 3, 632–642 (2005)
5. A.L. Dawe, D.L. Nuss, Hypoviruses and chestnut blight: exploiting viruses to understand and modulate fungal pathogenesis. Annu. Rev. Genet. 35, 1–29 (2001)
6. S. Chiba, L. Salaipeth, Y.H. Lin, A. Sasaki, S. Kanematsu, N. Suzuki, A novel bipartite double-stranded RNA mycovirus from the white root rot fungus Rosellinia necatrix: molecular and biological characterization, taxonomic considerations, and potential for biological control. J. Virol. 83, 12801–12812 (2009)
7. M.C. Cooke, Some extra–European fungi. Grevillea 7, 13–15 (1878)
8. D. Ladhalakshmi, G. Laha, R. Singh, A. Karthikeyan, S. Mangrauthia, R. Sundaram, P. Thukkaiyannan, B. Viraktamath, Isolation and characterization of Ustilaginoidea virens and survey of false smut disease of rice in India. Phytoparasitica 40, 171–176 (2012)
9. R.F. Luduena, M.C. Roach, V. Prasad, M. Banerjee, Y. Koiso, Y. Li, S. Iwasaki, Interaction of ustiloxin A with bovine brain tubulin. Biochem. Pharmacol. 47, 1593–1599 (1994)
10. Y. Koiso, Y. Li, S. Iwasaki, K. Hanaoka, T. Kobayashi, R. Sonoda, Y. Fujita, H. Yaegashi, Z. Sato, Ustiloxins, antimitotic cyclic peptides from false smut balls onrice panicles caused by Ustilaginoidea virens. J. Antibiot. 47, 765–773 (1994)
11. T. Zhang, Y. Jiang, J. Huang, W. Dong, Complete genome sequence of a putative novel victorivirus from Ustilaginoidea virens. Arch. Virol. 6, 1403–1406 (2013)
12. T. Zhang, Y. Jiang, J. Huang, W. Dong, Genomic organization of a novel partitivirus from the phytopathogenic fungus Ustilaginoidea virens. Arch. Virol. 158, 2415–2419 (2013)
13. Y. Jiang, C. Luo, D. Jiang, G. Li, J. Huang, The complete genomic sequence of a second novel partitivirus infecting Ustilaginoidea virens. Arch. Virol. 159, 1865–1868 (2014)
14. J. Zhong, J.Z. Zhu, X.H. Lei, D. Chen, H.J. Zhu, B.D. Gao, Complete genome sequence and organization of a novel virus from the rice false smut fungus Ustilaginoidea virens. Virus Genes 48, 329–333 (2014)
15. J. Zhong, Q. Zhou, X.H. Lei, D. Chen, H.H. Shang, H.J. Zhu, The nucleotide sequence and genome organization of two victoriviruses from the rice false smut fungus Ustilaginoidea virens. Virus Genes 48, 570–573 (2014)
16. J. Zhong, X.H. Lei, J.Z. Zhu, G. Song, Y.D. Zhang, Y. Chen, B.D. Gao, Detection and sequence analysis of two novel co-infecting double-strand RNA mycoviruses in Ustilaginoidea virens. Arch. Virol. 159, 3063–3070 (2014)
17. T. Zhang, Y. Jiang, W. Dong, A novel monopartite dsRNA virus isolated from the phytopathogenic fungus Ustilaginoidea virens and ancestrally related to a mitochondria-associated dsRNA in the green alga Bryopsis. Virology 462, 227–235 (2014)
18. Y. Jiang, T. Zhang, C. Luo, D. Jiang, G. Li, Q. Li, J. Huang, Prevalence and diversity of mycoviruses infecting the plant pathogen Ustilaginoidea virens. Virus Res. 195, 47–56 (2015)
19. T.J. Morris, J.A. Dodds, Isolation and analysis of double stranded RNA from virus-infected plant and fungal tissue. Phytopathol 69, 854–858 (1979)
20. M.A. Larkin, G. Blackshields, N.P. Brown, R. Chenna, P.A. McGettigan, H. McWilliam, D.G. Higgins, Clustal W and Clustal X version 2.0. Bioinformatics 23, 2947–2948 (2007)
21. K. Tamura, J. Dudley, M. Nei, S. Kumar, MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24, 1596–1599 (2007)
22. Y. Lin, H. Zhang, C. Zhao, S. Liu, L. Guo, The complete genome sequence of a novel mycovirus from Alternaria longipes strain HN28. Arch. Virol. (2014). doi:10.1007/s00705-014-2218-9
23. I. Kotta-Loizou, J. Sipkova, R.H. Coutts, Identification and sequence determination of a novel double-stranded RNA mycovirus from the entomopathogenic fungus Beauveria bassiana. Arch. Virol. (2015). doi:10.1007/s00705-014-2332-8