메뉴 건너뛰기




Volumn 6, Issue JULY, 2015, Pages 1-14

Maize miRNA and target regulation in response to hormone depletion and light exposure during somatic embryogenesis

Author keywords

Hormone depletion; Maize; miRNA; Photoperiod response; Polyribosomes; Somatic embryogenesis

Indexed keywords


EID: 84937825204     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2015.00555     Document Type: Article
Times cited : (67)

References (67)
  • 1
    • 47049120791 scopus 로고    scopus 로고
    • MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis
    • Abdel-Ghany, S. E., and Pilon, M. (2008). MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis. J. Biol. Chem. 283, 15932-15945. doi: 10.1074/jbc.M801406200
    • (2008) J. Biol. Chem. , vol.283 , pp. 15932-15945
    • Abdel-Ghany, S.E.1    Pilon, M.2
  • 2
    • 0031153960 scopus 로고    scopus 로고
    • Genes involved in organ separation in Arabidopsis: An analysis od the cup-shaped cotyledon mutant
    • Aida, M., Ishida, T., Fukaki, H., Fujisawa, H., and Tasaka, M. (1997). Genes involved in organ separation in Arabidopsis: an analysis od the cup-shaped cotyledon mutant.Plant Cell 9, 841-857. doi: 10.1105/tpc.9.6.841
    • (1997) Plant Cell , vol.9 , pp. 841-857
    • Aida, M.1    Ishida, T.2    Fukaki, H.3    Fujisawa, H.4    Tasaka, M.5
  • 3
    • 84869825304 scopus 로고    scopus 로고
    • MicroRNA159 can act as a switch or tuning microRNA independently of its abundance in Arabidopsis
    • Alonso-Peral, M. M., Sun, C., and Millar, A. A. (2012). MicroRNA159 can act as a switch or tuning microRNA independently of its abundance in Arabidopsis. PLoS ONE7:e34751. doi: 10.1371/journal.pone.0034751
    • (2012) PLoS ONE , vol.7
    • Alonso-Peral, M.M.1    Sun, C.2    Millar, A.A.3
  • 4
    • 0001017596 scopus 로고
    • Establishment and maintenance of fiable, embryogenic maize callus and the involment of L-proline
    • Armstrong, C., and Green, C. (1985). Establishment and maintenance of fiable, embryogenic maize callus and the involment of L-proline. Planta 164, 207-214. doi: 10.1007/BF00396083
    • (1985) Planta , vol.164 , pp. 207-214
    • Armstrong, C.1    Green, C.2
  • 5
    • 0002687545 scopus 로고
    • Development and availability of germoplasm with high Type II culture formation response
    • Armstrong, C., and Green, C. (1991). Development and availability of germoplasm with high Type II culture formation response. Maize Genet. Coop. News Lett. 65, 92-93.
    • (1991) Maize Genet. Coop. News Lett. , vol.65 , pp. 92-93
    • Armstrong, C.1    Green, C.2
  • 7
    • 79956144553 scopus 로고    scopus 로고
    • Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
    • Chen, C.-J., Liu, Q., Zhang, Y.-C., Qu, L.-H., Chen, Y.-Q., and Gautheret, D. (2011). Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus. RNA Biol. 8, 538-547. doi: 10.4161/rna.8.3.15199
    • (2011) RNA Biol. , vol.8 , pp. 538-547
    • Chen, C.-J.1    Liu, Q.2    Zhang, Y.-C.3    Qu, L.-H.4    Chen, Y.-Q.5    Gautheret, D.6
  • 8
    • 34047174556 scopus 로고    scopus 로고
    • The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA
    • Chuck, G., Cigan, A. M., Saeteurn, K., and Hake, S. (2007). The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA. Nat. Genet.39, 544-549. doi: 10.1038/ng2001
    • (2007) Nat. Genet. , vol.39 , pp. 544-549
    • Chuck, G.1    Cigan, A.M.2    Saeteurn, K.3    Hake, S.4
  • 9
    • 79959967431 scopus 로고    scopus 로고
    • psRNATarget: A plant small RNA target analysis server
    • Dai, X., and Zhao, P. X. (2011). psRNATarget: a plant small RNA target analysis server. Nucleic Acids Res. 39, W155-W159. doi: 10.1093/nar/gkr319
    • (2011) Nucleic Acids Res. , vol.39 , pp. W155-W159
    • Dai, X.1    Zhao, P.X.2
  • 10
    • 0033814516 scopus 로고    scopus 로고
    • Molecular cloning and developmental expression of AtGR1, a new growth-related Arabidopsis gene strongly induced by ionizing radiation
    • Deveaux, Y., Alonso, B., Pierrugues, O., Godon, C., and Kazmaier, M. (2000). Molecular cloning and developmental expression of AtGR1, a new growth-related Arabidopsis gene strongly induced by ionizing radiation. Radiat. Res. 154, 355-364. doi: 10.1667/0033-7587(2000)154[0355:MCADEO]2.0.CO;2
    • (2000) Radiat. Res. , vol.154 , pp. 355-364
    • Deveaux, Y.1    Alonso, B.2    Pierrugues, O.3    Godon, C.4    Kazmaier, M.5
  • 11
    • 84930172715 scopus 로고    scopus 로고
    • MicroRNA expression and regulation during plant somatic embryogenesis
    • eds R. Alvarez-Venegas, C. De la Peña, and J. Casas-Mollano (New York, NY; Dordrecht; London: Springer), 10.1007/978-3-319-07971-4_7
    • Dinkova, T., and Alejandri-Ramirez, D. (2014). "MicroRNA expression and regulation during plant somatic embryogenesis," in Epigenetics in Plants of Agronomic Importance: Fundamentals and Applications, eds R. Alvarez-Venegas, C. De la Peña, and J. Casas-Mollano (New York, NY; Dordrecht; London: Springer), 111-123. doi: 10.1007/978-3-319-07971-4_7
    • (2014) Epigenetics in Plants of Agronomic Importance: Fundamentals and Applications , pp. 111-123
    • Dinkova, T.1    Alejandri-Ramirez, D.2
  • 12
    • 84930614492 scopus 로고    scopus 로고
    • Molecular evolution and expansion analysis of the NAC transcription factor in Zea mays
    • Fan, K., Wang, M., Miao, Y., Ni, M., Bibi, N., Yuan, S., et al. (2014). Molecular evolution and expansion analysis of the NAC transcription factor in Zea mays. PLoS ONE 9:e111837. doi: 10.1371/journal.pone.0111837
    • (2014) PLoS ONE , vol.9
    • Fan, K.1    Wang, M.2    Miao, Y.3    Ni, M.4    Bibi, N.5    Yuan, S.6
  • 13
    • 33846904347 scopus 로고    scopus 로고
    • The miRNA 156/157 recognition element in the 3′ UTR of the Arabidopsis SPB box gene SPL3 prevents early flowering by translational inhibition in seedlings
    • Gandikota, M., Birkenbihl, R., Hohmann, S., Cardon, G., Saedler, H., and Huijser, P. (2007). The miRNA 156/157 recognition element in the 3′ UTR of the Arabidopsis SPB box gene SPL3 prevents early flowering by translational inhibition in seedlings.Plant J. 49, 683-693. doi: 10.1111/j.1365-313X.2006.02983.x
    • (2007) Plant J. , vol.49 , pp. 683-693
    • Gandikota, M.1    Birkenbihl, R.2    Hohmann, S.3    Cardon, G.4    Saedler, H.5    Huijser, P.6
  • 14
    • 84865966648 scopus 로고    scopus 로고
    • Maize somatic embryogenesis: Recent features to improve plant regeneration
    • 10.1007/978-1-61779-818-4_14
    • Garrocho-Villegas, V., de Jesús-Olivera, M. T., and Quintanar, E. S. (2012). Maize somatic embryogenesis: recent features to improve plant regeneration. Methods Mol. Biol. 877, 173-182. doi: 10.1007/978-1-61779-818-4_14
    • (2012) Methods Mol. Biol. , vol.877 , pp. 173-182
    • Garrocho-Villegas, V.1    de Jesús-Olivera, M.T.2    Quintanar, E.S.3
  • 15
    • 0001649412 scopus 로고
    • Plant regeneration from tissue cultures of maize
    • Green, C., and Phillips, R. (1975). Plant regeneration from tissue cultures of maize.Crop Sci. 15, 417-421. doi: 10.2135/cropsci1975.0011183X001500030040x
    • (1975) Crop Sci. , vol.15 , pp. 417-421
    • Green, C.1    Phillips, R.2
  • 16
    • 24944510549 scopus 로고    scopus 로고
    • MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development
    • Guo, H.-S., Xie, Q., Fei, J.-F., and Chua, N.-H. (2005). MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development. Plant Cell 17, 1376-1386. doi: 10.1105/tpc.105.030841
    • (2005) Plant Cell , vol.17 , pp. 1376-1386
    • Guo, H.-S.1    Xie, Q.2    Fei, J.-F.3    Chua, N.-H.4
  • 17
    • 0037043718 scopus 로고    scopus 로고
    • Enhancing the crops to feed the poor
    • Huang, J., Pray, C., and Rozelle, S. (2002). Enhancing the crops to feed the poor.Nature 418, 678-684. doi: 10.1038/nature01015
    • (2002) Nature , vol.418 , pp. 678-684
    • Huang, J.1    Pray, C.2    Rozelle, S.3
  • 18
    • 84888173712 scopus 로고    scopus 로고
    • Molecular insights into microRNA-mediated translational repression in plants
    • Iwakawa, H., and Tomari, Y. (2013). Molecular insights into microRNA-mediated translational repression in plants. Mol. Cell 52, 591-601. doi: 10.1016/j.molcel.2013.10.033
    • (2013) Mol. Cell , vol.52 , pp. 591-601
    • Iwakawa, H.1    Tomari, Y.2
  • 19
    • 84894027236 scopus 로고    scopus 로고
    • Somatic embryogenesis and plant regeneration from immature embryo induced callus of maize (Zea mays L.)
    • Jakubeková, M., Pet'ová, A., and Obert, B. (2012). Somatic embryogenesis and plant regeneration from immature embryo induced callus of maize (Zea mays L.). J. Microbiol. Biotechnol. Food Sci. 1, 478-487.
    • (2012) J. Microbiol. Biotechnol. Food Sci. , vol.1 , pp. 478-487
    • Jakubeková, M.1    Pet'ová, A.2    Obert, B.3
  • 20
    • 2942672580 scopus 로고    scopus 로고
    • Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
    • Jones-Rhoades, M. W., and Bartel, D. P. (2004). Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol. Cell 14, 787-799. doi: 10.1016/j.molcel.2004.05.027
    • (2004) Mol. Cell , vol.14 , pp. 787-799
    • Jones-Rhoades, M.W.1    Bartel, D.P.2
  • 22
    • 84858314394 scopus 로고    scopus 로고
    • BioMart: Driving a paradigm change in biological data management
    • Kasprzyk, A. (2011). BioMart: driving a paradigm change in biological data management. Database 2011: bar049. doi: 10.1093/database/bar049
    • (2011) Database , vol.2011
    • Kasprzyk, A.1
  • 23
    • 68949115601 scopus 로고    scopus 로고
    • Biochemical evidence for translational repression by Arabidopsis microRNAs
    • Lanet, E., Delannoy, E., Sormani, R., Floris, M., Brodersen, P., Crété, P., et al. (2009). Biochemical evidence for translational repression by Arabidopsis microRNAs. Plant Cell 21, 1762-1768. doi: 10.1105/tpc.108.063412
    • (2009) Plant Cell , vol.21 , pp. 1762-1768
    • Lanet, E.1    Delannoy, E.2    Sormani, R.3    Floris, M.4    Brodersen, P.5    Crété, P.6
  • 24
    • 84872847672 scopus 로고    scopus 로고
    • Deep sequencing of maize small RNAs reveals a diverse set of microRNA in dry and imbibed seeds
    • Li, D., Wang, L., Liu, X., Cui, D., Chen, T., Zhang, H., et al. (2013a). Deep sequencing of maize small RNAs reveals a diverse set of microRNA in dry and imbibed seeds. PLoS ONE 8:e55107. doi: 10.1371/journal.pone.0055107
    • (2013) PLoS ONE , vol.8
    • Li, D.1    Wang, L.2    Liu, X.3    Cui, D.4    Chen, T.5    Zhang, H.6
  • 25
    • 84876918219 scopus 로고    scopus 로고
    • MicroRNAs inhibit the translation of target mRNAs on the endoplasmic reticulum in Arabidopsis
    • Li, S., Liu, L., Zhuang, X., Yu, Y., Liu, X., Cui, X., et al. (2013b). MicroRNAs inhibit the translation of target mRNAs on the endoplasmic reticulum in Arabidopsis. Cell 153, 562-574. doi: 10.1016/j.cell.2013.04.005
    • (2013) Cell , vol.153 , pp. 562-574
    • Li, S.1    Liu, L.2    Zhuang, X.3    Yu, Y.4    Liu, X.5    Cui, X.6
  • 26
    • 84865587989 scopus 로고    scopus 로고
    • Deep sequencing and microarray hybridization identify conserved and species-specific microRNAs during somatic embryogenesis in hybrid yellow poplar
    • Li, T., Chen, J., Qiu, S., Zhang, Y., Wang, P., Yang, L., et al. (2012). Deep sequencing and microarray hybridization identify conserved and species-specific microRNAs during somatic embryogenesis in hybrid yellow poplar. PLoS ONE 7:e43451. doi: 10.1371/journal.pone.0043451
    • (2012) PLoS ONE , vol.7
    • Li, T.1    Chen, J.2    Qiu, S.3    Zhang, Y.4    Wang, P.5    Yang, L.6
  • 27
    • 84876104353 scopus 로고    scopus 로고
    • Comparative analysis reveals dynamic changes in miRNAs and their targets and expression during somatic embryogenesis in longan (Dimocarpus longan Lour.)
    • Lin, Y., and Lai, Z. (2013). Comparative analysis reveals dynamic changes in miRNAs and their targets and expression during somatic embryogenesis in longan (Dimocarpus longan Lour.). PLoS ONE 8:e60337. doi: 10.1371/journal.pone.0060337
    • (2013) PLoS ONE , vol.8
    • Lin, Y.1    Lai, Z.2
  • 28
    • 84892421877 scopus 로고    scopus 로고
    • Identification of miRNAs and their target genes in developing maize ears by combined small RNA and degradome sequencing
    • Liu, H., Qin, C., Chen, Z., Zuo, T., Yang, X., Zhou, H., et al. (2014). Identification of miRNAs and their target genes in developing maize ears by combined small RNA and degradome sequencing. BMC Genomics 15:25. doi: 10.1186/1471-2164-15-25
    • (2014) BMC Genomics , vol.15 , pp. 25
    • Liu, H.1    Qin, C.2    Chen, Z.3    Zuo, T.4    Yang, X.5    Zhou, H.6
  • 29
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak, K. J., and Schmittgen, T. D. (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25, 402-408. doi: 10.1006/meth.2001.1262
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 30
    • 0037144457 scopus 로고    scopus 로고
    • Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
    • Llave, C., Xie, Z., Kasschau, K., and Carrington, J. (2002). Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science 297, 2053-2056. doi: 10.1126/science.1076311
    • (2002) Science , vol.297 , pp. 2053-2056
    • Llave, C.1    Xie, Z.2    Kasschau, K.3    Carrington, J.4
  • 31
    • 33748288105 scopus 로고    scopus 로고
    • Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development
    • Luo, Y.-C., Zhou, H., Li, Y., Chen, J.-Y., Yang, J.-H., Chen, Y.-Q., et al. (2006). Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development. FEBS Lett. 580, 5111-5116. doi: 10.1016/j.febslet.2006.08.046
    • (2006) FEBS Lett. , vol.580 , pp. 5111-5116
    • Luo, Y.-C.1    Zhou, H.2    Li, Y.3    Chen, J.-Y.4    Yang, J.-H.5    Chen, Y.-Q.6
  • 32
    • 2942697259 scopus 로고    scopus 로고
    • MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs
    • Mallory, A. C., Dugas, D. V., Bartel, D. P., and Bartel, B. (2004). MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs. Curr. Biol. 14, 1035-1046. doi: 10.1016/j.cub.2004.06.022
    • (2004) Curr. Biol. , vol.14 , pp. 1035-1046
    • Mallory, A.C.1    Dugas, D.V.2    Bartel, D.P.3    Bartel, B.4
  • 33
    • 84937825895 scopus 로고    scopus 로고
    • From creole corn varieties (Zea mays L.), to transgenic hybrids. I: Germplasm collection and improved cultivars
    • Márquez-Sánchez, F. (2008). From creole corn varieties (Zea mays L.), to transgenic hybrids. I: germplasm collection and improved cultivars. Agric. Soc. y Desarrollo 5, 151-166.
    • (2008) Agric. Soc. y Desarrollo , vol.5 , pp. 151-166
    • Márquez-Sánchez, F.1
  • 34
    • 84857394951 scopus 로고    scopus 로고
    • Translation initiation factor AteIF(iso)4E is involved in selective mRNA translation in Arabidopsis thaliana seedlings
    • Martinez-Silva, A., Aguirre-Martinez, C., Flores-Tinoco, C., Alejandri-Ramirez, N., and Dinkova, T. (2012). Translation initiation factor AteIF(iso)4E is involved in selective mRNA translation in Arabidopsis thaliana seedlings. PLoS ONE 7:e31606. doi: 10.1371/journal.pone.0031606
    • (2012) PLoS ONE , vol.7
    • Martinez-Silva, A.1    Aguirre-Martinez, C.2    Flores-Tinoco, C.3    Alejandri-Ramirez, N.4    Dinkova, T.5
  • 35
    • 84982358134 scopus 로고
    • A revised medium for rapid growtn and bioassays with tabacco tissue cultures
    • Murashige, T., and Skoog, F. (1962). A revised medium for rapid growtn and bioassays with tabacco tissue cultures. Physiol. Plant. 15, 473-497. doi: 10.1111/j.1399-3054.1962.tb08052.x
    • (1962) Physiol. Plant. , vol.15 , pp. 473-497
    • Murashige, T.1    Skoog, F.2
  • 36
    • 84896956665 scopus 로고    scopus 로고
    • Regulation of Copper Homeostasis and Biotic Interactions by MicroRNA 398b in Common Bean
    • Naya, L., Paul, S., Valdés-López, O., Mendoza-Soto, A. B., Nova-Franco, B., Sosa-Valencia, G., et al. (2014). Regulation of Copper Homeostasis and Biotic Interactions by MicroRNA 398b in Common Bean. PLoS ONE 9:e84416. doi: 10.1371/journal.pone.0084416
    • (2014) PLoS ONE , vol.9
    • Naya, L.1    Paul, S.2    Valdés-López, O.3    Mendoza-Soto, A.B.4    Nova-Franco, B.5    Sosa-Valencia, G.6
  • 37
    • 78649806773 scopus 로고    scopus 로고
    • MicroRNAs prevent precocious gene expression and enable pattern formation during plant embryogenesis
    • Nodine, M. D., and Bartel, D. P. (2010). MicroRNAs prevent precocious gene expression and enable pattern formation during plant embryogenesis. Genes Dev. 24, 2678-2692. doi: 10.1101/gad.1986710
    • (2010) Genes Dev. , vol.24 , pp. 2678-2692
    • Nodine, M.D.1    Bartel, D.P.2
  • 39
    • 79958753423 scopus 로고    scopus 로고
    • Identification and characterization of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families in maize
    • Qian, Y., Cheng, Y., Cheng, X., Jiang, H., Zhu, S., and Cheng, B. (2011). Identification and characterization of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families in maize. Plant Cell Rep. 30, 1347-1363. doi: 10.1007/s00299-011-1046-6
    • (2011) Plant Cell Rep. , vol.30 , pp. 1347-1363
    • Qian, Y.1    Cheng, Y.2    Cheng, X.3    Jiang, H.4    Zhu, S.5    Cheng, B.6
  • 40
    • 84874674203 scopus 로고    scopus 로고
    • A set of Arabidopsis thaliana miRNAs involve shoot regeneration in vitro
    • Qiao, M., and Xiang, F. (2013). A set of Arabidopsis thaliana miRNAs involve shoot regeneration in vitro. Plant Signal. Behav. 8:e23479. doi: 10.4161/psb.23479
    • (2013) Plant Signal. Behav. , vol.8
    • Qiao, M.1    Xiang, F.2
  • 41
    • 84883416803 scopus 로고    scopus 로고
    • Copper and iron homeostasis in plants: The challenges of oxidative stress
    • Ravet, K., and Pilon, M. (2013). Copper and iron homeostasis in plants: the challenges of oxidative stress. Antioxid. Redox Signal. 19, 919-932. doi: 10.1089/ars.2012.5084
    • (2013) Antioxid. Redox Signal. , vol.19 , pp. 919-932
    • Ravet, K.1    Pilon, M.2
  • 42
    • 33846926826 scopus 로고    scopus 로고
    • ABA induction of miR159 controls transcript levels of two MYB factors during Arabidopsis seed germination
    • Reyes, J. L., and Chua, N.-H. (2007). ABA induction of miR159 controls transcript levels of two MYB factors during Arabidopsis seed germination. Plant J. 49, 592-606. doi: 10.1111/j.1365-313X.2006.02980.x
    • (2007) Plant J. , vol.49 , pp. 592-606
    • Reyes, J.L.1    Chua, N.-H.2
  • 43
    • 0037162702 scopus 로고    scopus 로고
    • Prediction of plant miRNA targets
    • Rhoades, M., Reinhart, B., Lim, L., Burge, C., Bartel, B., and Bartel, D. (2002). Prediction of plant miRNA targets. Cell 110, 513-520. doi: 10.1016/S0092-8674(02)00863-2
    • (2002) Cell , vol.110 , pp. 513-520
    • Rhoades, M.1    Reinhart, B.2    Lim, L.3    Burge, C.4    Bartel, B.5    Bartel, D.6
  • 44
    • 84908688766 scopus 로고    scopus 로고
    • Whole transcriptome profiling of maize during early somatic embryogenesis reveals altered expression of stress factors and embryogenesis-related genes
    • Salvo, S. A. G. D., Hirsch, C. N., Buell, C. R., Kaeppler, S. M., and Kaeppler, H. F. (2014). Whole transcriptome profiling of maize during early somatic embryogenesis reveals altered expression of stress factors and embryogenesis-related genes. PLoS ONE 9:e111407. doi: 10.1371/journal.pone.0111407
    • (2014) PLoS ONE , vol.9
    • Salvo, S.A.G.D.1    Hirsch, C.N.2    Buell, C.R.3    Kaeppler, S.M.4    Kaeppler, H.F.5
  • 45
    • 79955875150 scopus 로고    scopus 로고
    • Genome-wide atlas of transcription during maize development
    • Sekhon, R. S., Lin, H., Childs, K. L., Hansey, C. N., Buell, C. R., de Leon, N., et al. (2011). Genome-wide atlas of transcription during maize development. Plant J. 66, 553-563. doi: 10.1111/j.1365-313X.2011.04527.x
    • (2011) Plant J. , vol.66 , pp. 553-563
    • Sekhon, R.S.1    Lin, H.2    Childs, K.L.3    Hansey, C.N.4    Buell, C.R.5    de Leon, N.6
  • 46
    • 84888012239 scopus 로고    scopus 로고
    • Combined small RNA and degradome sequencing reveals microRNA regulation during immature maize embryo dedifferentiation
    • Shen, Y., Jiang, Z., Lu, S., Lin, H., Gao, S., Peng, H., et al. (2013). Combined small RNA and degradome sequencing reveals microRNA regulation during immature maize embryo dedifferentiation. Biochem. Biophys. Res. Commun. 441, 425-430. doi: 10.1016/j.bbrc.2013.10.113
    • (2013) Biochem. Biophys. Res. Commun. , vol.441 , pp. 425-430
    • Shen, Y.1    Jiang, Z.2    Lu, S.3    Lin, H.4    Gao, S.5    Peng, H.6
  • 47
    • 84863364799 scopus 로고    scopus 로고
    • Genome expression profile analysis of the immature maize embryo during dedifferentiation
    • Shen, Y., Jiang, Z., Yao, X., Zhang, Z., Lin, H., Zhao, M., et al. (2012). Genome expression profile analysis of the immature maize embryo during dedifferentiation.PLoS ONE 7:e32237. doi: 10.1371/journal.pone.0032237
    • (2012) PLoS ONE , vol.7
    • Shen, Y.1    Jiang, Z.2    Yao, X.3    Zhang, Z.4    Lin, H.5    Zhao, M.6
  • 48
    • 0029960982 scopus 로고    scopus 로고
    • The no apical meristem gene of petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries
    • Souer, E., van Houwelingen, A., Kloos, D., Mol, J., and Koes, R. (1996). The no apical meristem gene of petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries. Cell 85, 159-170. doi: 10.1016/S0092-8674(00)81093-4
    • (1996) Cell , vol.85 , pp. 159-170
    • Souer, E.1    van Houwelingen, A.2    Kloos, D.3    Mol, J.4    Koes, R.5
  • 49
    • 34247282083 scopus 로고    scopus 로고
    • Transcriptional profiling of the Arabidopsis embryo
    • Spencer, M. W. B., Casson, S. A., and Lindsey, K. (2007). Transcriptional profiling of the Arabidopsis embryo. Plant Physiol. 143, 924-940. doi: 10.1104/pp.106.087668
    • (2007) Plant Physiol. , vol.143 , pp. 924-940
    • Spencer, M.W.B.1    Casson, S.A.2    Lindsey, K.3
  • 50
    • 0038219977 scopus 로고    scopus 로고
    • Recent advances in conifer somatic embryogenesis: Improving somatic embryo quality
    • 10.1023/A:1023345803336
    • Stasolla, C., and Yeung, E. C. (2003). Recent advances in conifer somatic embryogenesis: improving somatic embryo quality. Plant Cell Tissue Organ Cult. 74, 15-35. doi: 10.1023/A:1023345803336
    • (2003) Plant Cell Tissue Organ Cult. , vol.74 , pp. 15-35
    • Stasolla, C.1    Yeung, E.C.2
  • 51
    • 4043074968 scopus 로고    scopus 로고
    • Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
    • Sunkar, R., and Zhu, J.-K. (2004). Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. Plant Cell 16, 2001-2019. doi: 10.1105/tpc.104.022830
    • (2004) Plant Cell , vol.16 , pp. 2001-2019
    • Sunkar, R.1    Zhu, J.-K.2
  • 52
    • 41549111182 scopus 로고    scopus 로고
    • Isolation of carrot Argonaute1 from subtractive somatic embryogenesis cDNA library
    • Takahata, K. (2008). Isolation of carrot Argonaute1 from subtractive somatic embryogenesis cDNA library. Biosci. Biotechnol. Biochem. 72, 900-904. doi: 10.1271/bbb.70730
    • (2008) Biosci. Biotechnol. Biochem. , vol.72 , pp. 900-904
    • Takahata, K.1
  • 54
    • 33645967150 scopus 로고    scopus 로고
    • AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1
    • Vaucheret, H., Mallory, A. C., and Bartel, D. P. (2006). AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1.Mol. Cell 22, 129-136. doi: 10.1016/j.molcel.2006.03.011
    • (2006) Mol. Cell , vol.22 , pp. 129-136
    • Vaucheret, H.1    Mallory, A.C.2    Bartel, D.P.3
  • 55
    • 54949093292 scopus 로고    scopus 로고
    • Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana
    • Wang, J.-W., Schwab, R., Czech, B., Mica, E., and Weigel, D. (2008). Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana. Plant Cell 20, 1231-1243. doi: 10.1105/tpc.108.058180
    • (2008) Plant Cell , vol.20 , pp. 1231-1243
    • Wang, J.-W.1    Schwab, R.2    Czech, B.3    Mica, E.4    Weigel, D.5
  • 56
    • 79953698444 scopus 로고    scopus 로고
    • MicroRNAs regulate the timing of embryo maturation in Arabidopsis
    • Willmann, M. R., Mehalick, A. J., Packer, R. L., and Jenik, P. D. (2011). MicroRNAs regulate the timing of embryo maturation in Arabidopsis. Plant Physiol. 155, 1871-1884. doi: 10.1104/pp.110.171355
    • (2011) Plant Physiol. , vol.155 , pp. 1871-1884
    • Willmann, M.R.1    Mehalick, A.J.2    Packer, R.L.3    Jenik, P.D.4
  • 57
    • 0344244915 scopus 로고    scopus 로고
    • The Role of GAMYB transcription factors in GA-regulated gene expression
    • Woodger, F. J., Millar, A., Murray, F., Jacobsen, J. V., and Gubler, F. (2003). The Role of GAMYB transcription factors in GA-regulated gene expression. J. Plant Growth Regul. 22, 176-184. doi: 10.1007/s00344-003-0025-8
    • (2003) J. Plant Growth Regul. , vol.22 , pp. 176-184
    • Woodger, F.J.1    Millar, A.2    Murray, F.3    Jacobsen, J.V.4    Gubler, F.5
  • 58
    • 33750373240 scopus 로고    scopus 로고
    • Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3
    • Wu, G., and Poethig, R. S. (2006). Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3. Development 133, 3539-3547. doi: 10.1242/dev.02521
    • (2006) Development , vol.133 , pp. 3539-3547
    • Wu, G.1    Poethig, R.S.2
  • 59
    • 84926419405 scopus 로고    scopus 로고
    • Genomewide analysis of small RNAs in nonembryogenic and embryogenic tissues of citrus: MicroRNA- and siRNA-mediated transcript cleavage involved in somatic embryogenesis
    • Wu, X.-M., Kou, S.-J., Liu, Y.-L., Fang, Y.-N., Xu, Q., and Guo, W.-W. (2015). Genomewide analysis of small RNAs in nonembryogenic and embryogenic tissues of citrus: microRNA- and siRNA-mediated transcript cleavage involved in somatic embryogenesis. Plant Biotechnol. J. 13, 383-394. doi: 10.1111/pbi.12317
    • (2015) Plant Biotechnol. J. , vol.13 , pp. 383-394
    • Wu, X.-M.1    Kou, S.-J.2    Liu, Y.-L.3    Fang, Y.-N.4    Xu, Q.5    Guo, W.-W.6
  • 60
    • 79951958197 scopus 로고    scopus 로고
    • Stage and tissue-specific modulation of ten conserved miRNAs and their targets during somatic embryogenesis of Valencia sweet orange
    • Wu, X.-M., Liu, M.-Y., Ge, X.-X., Xu, Q., and Guo, W.-W. (2011). Stage and tissue-specific modulation of ten conserved miRNAs and their targets during somatic embryogenesis of Valencia sweet orange. Planta 233, 495-505. doi: 10.1007/s00425-010-1312-9
    • (2011) Planta , vol.233 , pp. 495-505
    • Wu, X.-M.1    Liu, M.-Y.2    Ge, X.-X.3    Xu, Q.4    Guo, W.-W.5
  • 61
    • 33748769519 scopus 로고    scopus 로고
    • Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice
    • Xie, K., Wu, C., and Xiong, L. (2006). Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice. Plant Physiol. 142, 280-293. doi: 10.1104/pp.106.084475
    • (2006) Plant Physiol. , vol.142 , pp. 280-293
    • Xie, K.1    Wu, C.2    Xiong, L.3
  • 63
    • 84876039714 scopus 로고    scopus 로고
    • Small RNA and degradome sequencing reveal complex miRNA regulation during cotton somatic embryogenesis
    • Yang, X., Wang, L., Yuan, D., Lindsey, K., and Zhang, X. (2013). Small RNA and degradome sequencing reveal complex miRNA regulation during cotton somatic embryogenesis. J. Exp. Bot. 64, 1521-1536. doi: 10.1093/jxb/ert013
    • (2013) J. Exp. Bot. , vol.64 , pp. 1521-1536
    • Yang, X.1    Wang, L.2    Yuan, D.3    Lindsey, K.4    Zhang, X.5
  • 64
    • 84872660687 scopus 로고    scopus 로고
    • Genome-wide identification and analysis of microRNA responding to long-term waterlogging in crown roots of maize seedlings
    • Zhai, L., Liu, Z., Zou, X., Jiang, Y., Qiu, F., Zheng, Y., et al. (2013). Genome-wide identification and analysis of microRNA responding to long-term waterlogging in crown roots of maize seedlings. Physiol. Plant. 147, 181-193. doi: 10.1111/j.1399-3054.2012.01653.x
    • (2013) Physiol. Plant. , vol.147 , pp. 181-193
    • Zhai, L.1    Liu, Z.2    Zou, X.3    Jiang, Y.4    Qiu, F.5    Zheng, Y.6
  • 65
    • 84864359077 scopus 로고    scopus 로고
    • Genome-wide identification of microRNAs in larch and stage-specific modulation of 11 conserved microRNAs and their targets during somatic embryogenesis
    • Zhang, J., Zhang, S., Han, S., Wu, T., Li, X., Li, W., et al. (2012). Genome-wide identification of microRNAs in larch and stage-specific modulation of 11 conserved microRNAs and their targets during somatic embryogenesis. Planta 236, 647-657. doi: 10.1007/s00425-012-1643-9
    • (2012) Planta , vol.236 , pp. 647-657
    • Zhang, J.1    Zhang, S.2    Han, S.3    Wu, T.4    Li, X.5    Li, W.6
  • 66
    • 77955271290 scopus 로고    scopus 로고
    • Four abiotic stress-induced miRNA families differentially regulated in the embryogenic and non-embryogenic callus tissues of Larix leptolepis
    • Zhang, S., Zhou, J., Han, S., Yang, W., Li, W., Wei, H., et al. (2010). Four abiotic stress-induced miRNA families differentially regulated in the embryogenic and non-embryogenic callus tissues of Larix leptolepis. Biochem. Biophys. Res. Commun. 398, 355-360. doi: 10.1016/j.bbrc.2010.06.056
    • (2010) Biochem. Biophys. Res. Commun. , vol.398 , pp. 355-360
    • Zhang, S.1    Zhou, J.2    Han, S.3    Yang, W.4    Li, W.5    Wei, H.6
  • 67
    • 0027140373 scopus 로고
    • Somatic embryogenesis: A model for early development in higher plants
    • Zimmerman, J. L. (1993). Somatic embryogenesis: a model for early development in higher plants. Plant Cell 5, 1411-1423. doi: 10.1105/tpc.5.10.1411
    • (1993) Plant Cell , vol.5 , pp. 1411-1423
    • Zimmerman, J.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.